Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3354 Papaver somniferum HOM05D002030 ORTHO05D007413 0.0e+00 1970.3 1092 100.0
PSO339G1606 Papaver somniferum HOM05D002030 ORTHO05D007413 0.0e+00 1837.8 1092 93.0
Nn7g36615 Nelumbo nucifera HOM05D002030 ORTHO05D007413 3.0e-295 1018.8 1096 51.4
Aqoxy1G00344 Aquilegia oxysepala HOM05D002030 ORTHO05D007413 1.8e-287 993.0 1097 49.1
Dinv05065 Davidia involucrata HOM05D002030 ORTHO05D007413 5.2e-279 964.9 1095 48.9
MBI03_g13094_MAGBIO Magnolia biondii HOM05D002030 ORTHO05D007413 1.8e-252 876.7 1221 43.2
Gohir.A05G071600 Gossypium hirsutum HOM05D002030 ORTHO05D007413 1.0e-250 870.9 1078 46.0
Cfa010958 Carpinus fangiana HOM05D002030 ORTHO05D007413 1.3e-250 870.5 1087 46.6
Haze_02982 Corylus avellana HOM05D002030 ORTHO05D007413 2.3e-250 869.8 1087 46.7
CiPaw.06G055000 Carya illinoinensis HOM05D002030 ORTHO05D007413 6.1e-248 861.7 1039 47.4
Duzib168G1726 Durio zibethinus HOM05D002030 ORTHO05D007413 1.0e-247 860.9 1087 46.1
Cfa019819 Carpinus fangiana HOM05D002030 ORTHO05D007413 2.3e-247 859.8 1092 46.0
COL.COLO4_33273 Corchorus olitorius HOM05D002030 ORTHO05D007413 1.7e-245 853.6 1084 46.6
CANSAT25G2826 Cannabis sativa HOM05D002030 ORTHO05D007413 2.9e-245 852.8 1088 43.9
QL04p021544 Quercus lobata HOM05D002030 ORTHO05D007413 6.4e-245 851.7 1084 46.2
Gorai.009G075600 Gossypium raimondii HOM05D002030 ORTHO05D007413 1.4e-244 850.5 1078 45.7
Manes.02G141000 Manihot esculenta HOM05D002030 ORTHO05D007413 3.5e-243 845.9 1080 45.3
Atru.chr3.2803 Acer truncatum HOM05D002030 ORTHO05D007413 7.5e-238 828.2 1079 44.6
Potri.001G277200 Populus trichocarpa HOM05D002030 ORTHO05D007413 9.8e-238 827.8 1083 44.8
ClCG03G012710 Citrullus lanatus HOM05D002030 ORTHO05D007413 1.9e-233 813.5 1043 45.3
Cpa.g.sc529.1 Carica papaya HOM05D002030 ORTHO05D007413 2.8e-232 809.7 1078 44.4
MELO3C015133.2 Cucumis melo HOM05D002030 ORTHO05D007413 4.7e-232 808.9 1060 44.3
CsaV3_1G043250 Cucumis sativus L. HOM05D002030 ORTHO05D007413 2.3e-231 806.6 1034 45.0
MD11G1194100 Malus domestica HOM05D002030 ORTHO05D007413 4.0e-231 805.8 1082 42.4
Sabra16G0171300 Salix brachista HOM05D002030 ORTHO05D007413 1.5e-230 803.9 1057 43.7
AUR62039829 Chenopodium quinoa HOM05D002030 ORTHO05D004391 2.3e-226 790.0 1088 42.8
Sc19g0005890 Simmondsia chinensis HOM05D002030 ORTHO05D007413 3.9e-226 789.3 1095 42.0
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 2.5e-225 786.6 1089 42.0
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 6.4e-221 771.9 1091 41.5
THA.LOC104800445 Tarenaya hassleriana HOM05D002030 ORTHO05D007413 1.1e-215 754.6 1069 41.3
Ah.04g162000 Amaranthus hybridus HOM05D002030 ORTHO05D007413 1.1e-212 744.6 1069 41.0
Lj4P151T58 Lonicera japonica HOM05D002030 ORTHO05D007413 3.6e-208 729.6 1094 41.7
TAR628G0894 Trochodendron aralioides HOM05D002030 ORTHO05D007413 3.0e-202 709.9 495 69.7
AUR62000179 Chenopodium quinoa HOM05D002030 ORTHO05D007413 8.7e-202 708.4 1091 40.0
ATR0693G336 Amborella trichopoda HOM05D002030 ORTHO05D007413 1.6e-195 687.6 1308 38.7
PGR102G2312 Punica granatum HOM05D002030 ORTHO05D007413 6.7e-186 655.6 1083 38.9
Gohir.D05G074500 Gossypium hirsutum HOM05D002030 ORTHO05D007413 5.3e-183 646.0 887 43.0
SHI24995 Sapria himalayana HOM05D002030 ORTHO05D007413 1.0e-181 641.7 1074 38.3
CSS0014605 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 2.9e-173 613.6 500 61.0
CSS0026005 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 3.8e-173 613.2 468 63.9
Ciclev10018312m.g Citrus clementina HOM05D002030 ORTHO05D007413 6.5e-173 612.5 454 66.1
RcHm_v2.0_Chr6g0267091 Rosa chinensis HOM05D002030 ORTHO05D007413 4.4e-169 599.7 464 63.6
Cc01_g00100 Coffea canephora HOM05D002030 ORTHO05D007413 7.4e-169 599.0 460 63.7
Prupe.1G578000 Prunus persica HOM05D002030 ORTHO05D007413 1.3e-168 598.2 497 59.8
Hma1.2p1_0872F.1_g231160 Hydrangea macrophylla HOM05D002030 ORTHO05D007413 4.8e-168 596.3 465 62.8
Rhsim13G0212600 Rhododendron simsii HOM05D002030 ORTHO05D007413 8.2e-168 595.5 499 60.9
TWI09G0205 Tripterygium wilfordii HOM05D002030 ORTHO05D007413 2.0e-166 590.9 497 59.4
Lalb_Chr02g0151181 Lupinus albus HOM05D002030 ORTHO05D007413 1.6e-163 581.3 461 60.7
Oeu024896.1 Olea europaea HOM05D002030 ORTHO05D007413 8.0e-163 578.9 485 59.2
MD15G1397300 Malus domestica HOM05D002030 ORTHO05D007413 1.4e-162 578.2 455 61.5
MSTRG.19666 Avicennia marina HOM05D002030 ORTHO05D007413 2.4e-159 567.4 454 60.4
PSO478G2842 Papaver somniferum HOM05D002030 ORTHO05D007413 3.5e-158 563.5 362 79.8
FvH4_3g28960 Fragaria vesca HOM05D002030 ORTHO05D007413 7.7e-158 562.4 454 61.2
Lsat_1_v5_gn_5_164660 Lactuca sativa HOM05D002030 ORTHO05D007413 2.2e-157 560.8 463 60.7
Psat4g003440 Pisum sativum HOM05D002030 ORTHO05D007413 2.9e-157 560.5 460 60.4
Nitab4.5_0002358g0010 Nicotiana tabacum HOM05D002030 ORTHO05D007413 1.9e-156 557.8 498 55.4
Mapoly0033s0111 Marchantia polymorpha HOM05D002030 ORTHO05D007413 2.7e-155 553.9 1119 32.7
Migut.J01395 Erythranthe guttata HOM05D002030 ORTHO05D007413 1.4e-154 551.6 465 59.8
CAN.G993.31 Capsicum annuum HOM05D002030 ORTHO05D007413 3.0e-154 550.4 467 55.9
PGSC0003DMG401026992 Solanum tuberosum HOM05D002030 ORTHO05D007413 4.0e-154 550.1 496 54.4
Peaxi162Scf00108g00034 Petunia axillaris HOM05D002030 ORTHO05D007413 5.2e-154 549.7 454 58.4
Solyc06g071630.2 Solanum lycopersicum HOM05D002030 ORTHO05D007413 4.4e-153 546.6 499 54.3
Sopen06g027940 Solanum pennellii HOM05D002030 ORTHO05D007413 5.7e-153 546.2 499 53.9
HanXRQChr10g0319281 Helianthus annuus HOM05D002030 ORTHO05D007413 1.7e-152 544.7 462 58.9
Thecc.09G250300 Theobroma cacao HOM05D002030 ORTHO05D007413 1.7e-152 544.7 384 68.2
SEGI_26527 Sequoiadendron giganteum HOM05D002030 ORTHO05D007413 8.3e-152 542.3 1085 35.2
Medtr4g132910 Medicago truncatula HOM05D002030 ORTHO05D007413 5.4e-151 539.7 466 56.9
Lj5g0021026 Lotus japonicus HOM05D002030 ORTHO05D007413 9.1e-151 538.9 460 57.0
RcHm_v2.0_Chr2g0127281 Rosa chinensis HOM05D002030 ORTHO05D007413 2.7e-150 537.3 496 55.0
SGA_v2.0_scaffold45G17005 Striga asiatica HOM05D002030 ORTHO05D007413 1.5e-148 531.6 461 57.3
arahy.Tifrunner.gnm1.ann1.DSBP33 Arachis hypogaea HOM05D002030 ORTHO05D007413 4.7e-147 526.6 469 55.4
arahy.Tifrunner.gnm1.ann1.59T0PU Arachis hypogaea HOM05D002030 ORTHO05D007413 8.0e-147 525.8 469 55.4
Pp3c16_4000 Physcomitrium patens HOM05D002030 ORTHO05D007413 8.3e-144 515.8 1135 32.4
VMungo0720G1521 Vigna mungo HOM05D002030 ORTHO05D007413 5.4e-143 513.1 445 57.3
Phvul.007G141800 Phaseolus vulgaris HOM05D002030 ORTHO05D007413 9.2e-143 512.3 450 56.2
AagrBONN_evm.TU.Sc2ySwM_368.2374 Anthoceros agrestis HOM05D002030 ORTHO05D007413 3.5e-142 510.4 1104 32.8
HPP92_008257 Vanilla planifolia HOM05D002030 ORTHO05D007413 8.6e-141 505.8 477 51.6
unitig_0.g561 Utricularia gibba HOM05D002030 ORTHO05D007413 1.1e-140 505.4 455 54.5
Thhalv10017599m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 5.7e-137 493.0 460 53.3
CARHR220820 Cardamine hirsuta HOM05D002030 ORTHO05D007413 4.9e-136 490.0 476 50.8
Aa31LG9G2740 Aethionema arabicum HOM05D002030 ORTHO05D007413 6.4e-136 489.6 482 50.6
AL7G41540 Arabidopsis lyrata HOM05D002030 ORTHO05D007413 8.3e-136 489.2 456 52.4
Carub.0007s2761 Capsella rubella HOM05D002030 ORTHO05D007413 1.8e-135 488.0 468 51.5
Thhalv10027440m.g Eutrema salsugineum HOM05D002030 ORTHO05D007413 2.4e-135 487.6 460 53.3
BolC3t14628H Brassica oleracea HOM05D002030 ORTHO05D007413 9.2e-135 485.7 457 53.0
C03p22450 Brassica napus HOM05D002030 ORTHO05D007413 2.0e-134 484.6 457 52.7
Sed0013906 Sechium edule HOM05D002030 ORTHO05D007413 2.0e-134 484.6 817 37.9
BraA03t11180Z Brassica rapa HOM05D002030 ORTHO05D007413 7.8e-134 482.6 455 53.0
A03p19250 Brassica napus HOM05D002030 ORTHO05D007413 2.3e-133 481.1 455 53.0
Actinidia06954 Actinidia chinensis HOM05D002030 ORTHO05D007413 5.0e-133 479.9 342 68.4
Ca_21049_v3 Cicer arietinum L. HOM05D002030 ORTHO05D007413 5.0e-133 479.9 459 54.7
Sp7g12690 Schrenkiella parvula HOM05D002030 ORTHO05D007413 1.9e-132 478.0 470 51.7
Glyma.20G191000 Glycine max HOM05D002030 ORTHO05D007413 1.8e-130 471.5 471 51.6
AT4G14590 Arabidopsis thaliana HOM05D002030 ORTHO05D007413 1.5e-129 468.4 488 49.8
RcHm_v2.0_Chr6g0255981 Rosa chinensis HOM05D002030 ORTHO05D007413 1.9e-127 461.5 352 64.2
TPR.G37056 Trifolium pratense HOM05D002030 ORTHO05D007413 3.5e-126 457.2 345 63.8
Peaxi162Scf00177g00919 Petunia axillaris HOM05D002030 ORTHO05D007413 2.3e-122 444.5 345 61.2
CDE02G3397 Ceratophyllum demersum HOM05D002030 ORTHO05D007413 2.6e-121 441.0 310 65.8
ECA248G2873 Erigeron canadensis HOM05D002030 ORTHO05D007413 1.7e-120 438.3 358 62.6
GSVIVG01037252001 Vitis vinifera HOM05D002030 ORTHO05D007413 2.1e-118 431.4 823 35.5
SMO141G0167 Selaginella moellendorffii HOM05D002030 ORTHO05D007413 7.8e-118 429.5 467 45.2
BcaC08g44279 Brassica carinata HOM05D002030 ORTHO05D007413 5.6e-116 423.3 463 47.7
C06p16980 Brassica napus HOM05D002030 ORTHO05D007413 5.6e-116 423.3 463 47.7
Rhsim13G0218500 Rhododendron simsii HOM05D002030 ORTHO05D007413 1.1e-114 419.1 458 48.9
CBR_g18996 Chara braunii HOM05D002030 ORTHO05D007413 1.7e-104 385.2 434 44.7
arahy.Tifrunner.gnm1.ann1.G6N61A Arachis hypogaea HOM05D002030 ORTHO05D007413 5.1e-101 373.6 375 51.5
Eucgr.B03727 Eucalyptus grandis HOM05D002030 ORTHO05D007413 6.2e-99 366.7 813 31.5
Cc04_g16190 Coffea canephora HOM05D002030 ORTHO05D007413 9.6e-92 342.8 459 42.3
HanXRQChr14g0432371 Helianthus annuus HOM05D002030 ORTHO05D007413 1.4e-87 328.9 366 50.0
DCAR_031630 Daucus carota HOM05D002030 ORTHO05D007413 3.0e-85 321.2 1072 26.9
Zm00001eb091720 Zea mays HOM05D002030 ORTHO05D007413 6.0e-78 297.0 319 48.0
CSS0011008 Camellia sinensis var. sinensis HOM05D002030 ORTHO05D007413 5.1e-77 293.9 259 59.1
Os11g0171400 Oryza sativa ssp. japonica HOM05D002030 ORTHO05D007413 5.5e-71 273.9 263 53.2
BolC6t36898H Brassica oleracea HOM05D002030 ORTHO05D007413 5.5e-63 247.3 461 35.8
MD00G1154100 Malus domestica HOM05D002030 ORTHO05D007413 1.4e-61 242.7 739 28.6
Nitab4.5_0001515g0060 Nicotiana tabacum HOM05D002030 ORTHO05D007413 2.3e-61 241.9 172 64.5
COL.COLO4_19604 Corchorus olitorius HOM05D002030 ORTHO05D007413 1.2e-57 229.6 196 60.2
BcaC01g05780 Brassica carinata HOM05D002030 ORTHO05D007413 4.2e-55 221.1 215 51.2
FAN21G2573 Fragaria x ananassa HOM05D002030 ORTHO05D007413 1.8e-45 189.1 178 54.5
Atru.chr1.1605 Acer truncatum HOM05D002030 ORTHO05D007413 1.2e-44 186.4 175 53.7
BcaC01g05781 Brassica carinata HOM05D002030 ORTHO05D007413 5.2e-37 161.0 117 61.5
TAR628G0523 Trochodendron aralioides HOM05D002030 ORTHO05D007413 9.8e-36 156.8 255 41.2
DCAR_031631 Daucus carota HOM05D002030 ORTHO05D007413 1.2e-22 113.2 403 25.8
Glyma.10G199232 Glycine max HOM05D002030 ORTHO05D007413 4.7e-22 111.3 146 43.2
Nitab4.5_0001515g0100 Nicotiana tabacum HOM05D002030 ORTHO05D007413 8.9e-21 107.1 62 75.8
Sc16g0005130 Simmondsia chinensis HOM05D002030 ORTHO05D007413 2.5e-15 89.0 73 57.5
Medtr4g132950 Medicago truncatula HOM05D002030 ORTHO05D007413 2.2e-11 75.9 78 50.0
Solyc12g010650.1 Solanum lycopersicum HOM05D000161 ORTHO05D000111 1.3e-08 66.6 42 64.3


User provided reference genes

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