Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3323 Papaver somniferum HOM05D006952 ORTHO05D008687 3.1e-62 241.5 113 100.0
PSO339G3931 Papaver somniferum HOM05D006952 ORTHO05D008687 1.2e-58 229.6 113 94.7
Cfa017257 Carpinus fangiana HOM05D006952 ORTHO05D008687 1.4e-49 199.5 113 75.2
Haze_20948 Corylus avellana HOM05D006952 ORTHO05D008687 1.4e-49 199.5 113 75.2
Nn2g11358 Nelumbo nucifera HOM05D006952 ORTHO05D008687 6.7e-49 197.2 113 77.0
TAR636G2834 Trochodendron aralioides HOM05D006952 ORTHO05D008687 2.0e-48 195.7 113 77.0
Thecc.05G022400 Theobroma cacao HOM05D006952 ORTHO05D008687 2.6e-48 195.3 113 74.3
VMungo1383G2957 Vigna mungo HOM05D006952 ORTHO05D008687 2.6e-48 195.3 113 76.1
Duzib128G2003 Durio zibethinus HOM05D006952 ORTHO05D008687 9.7e-48 193.4 113 73.5
Atru.chr8.2194 Acer truncatum HOM05D006952 ORTHO05D008687 1.3e-47 193.0 113 72.6
Duzib093G2046 Durio zibethinus HOM05D006952 ORTHO05D008687 1.3e-47 193.0 113 73.5
arahy.Tifrunner.gnm1.ann1.ES8MJM Arachis hypogaea HOM05D006952 ORTHO05D008687 1.7e-47 192.6 113 73.5
Phvul.008G108100 Phaseolus vulgaris HOM05D006952 ORTHO05D008687 2.2e-47 192.2 113 74.3
TWI77G0025 Tripterygium wilfordii HOM05D006952 ORTHO05D008687 2.2e-47 192.2 113 75.2
Lalb_Chr03g0042961 Lupinus albus HOM05D006952 ORTHO05D008687 2.8e-47 191.8 113 73.5
Ciclev10013166m.g Citrus clementina HOM05D006952 ORTHO05D008687 6.3e-47 190.7 113 71.7
Hma1.2p1_0763F.1_g214620 Hydrangea macrophylla HOM05D006952 ORTHO05D008687 6.3e-47 190.7 113 70.8
arahy.Tifrunner.gnm1.ann1.EMW6YX Arachis hypogaea HOM05D006952 ORTHO05D008687 1.4e-46 189.5 112 72.3
CiPaw.10G154300 Carya illinoinensis HOM05D006952 ORTHO05D008687 1.8e-46 189.1 113 71.7
TAR369G0842 Trochodendron aralioides HOM05D006952 ORTHO05D008687 1.8e-46 189.1 113 76.1
CANSAT35G1060 Cannabis sativa HOM05D006952 ORTHO05D008687 2.4e-46 188.7 113 72.6
CsaV3_3G034170 Cucumis sativus L. HOM05D006952 ORTHO05D008687 2.4e-46 188.7 113 72.6
Glyma.07G144600 Glycine max HOM05D006952 ORTHO05D008687 2.4e-46 188.7 113 72.6
Aqoxy1G00719 Aquilegia oxysepala HOM05D006952 ORTHO05D008687 3.1e-46 188.3 111 73.9
Cc06_g01680 Coffea canephora HOM05D006952 ORTHO05D008687 3.1e-46 188.3 113 71.7
Prupe.6G270600 Prunus persica HOM05D006952 ORTHO05D008687 3.1e-46 188.3 113 72.6
Cpa.g.sc56.113 Carica papaya HOM05D006952 ORTHO05D008687 4.1e-46 188.0 113 71.7
Glyma.18G196300 Glycine max HOM05D006952 ORTHO05D008687 4.1e-46 188.0 113 72.6
Gohir.D09G158700 Gossypium hirsutum HOM05D006952 ORTHO05D008687 4.1e-46 188.0 113 72.6
Gorai.006G180400 Gossypium raimondii HOM05D006952 ORTHO05D008687 4.1e-46 188.0 113 72.6
Nn2g13603 Nelumbo nucifera HOM05D006952 ORTHO05D008687 9.1e-46 186.8 110 72.7
MBI14_g32939_MAGBIO Magnolia biondii HOM05D006952 ORTHO05D008687 1.2e-45 186.4 113 72.6
ATR0618G178 Amborella trichopoda HOM05D006952 ORTHO05D008687 2.7e-45 185.3 113 69.9
MSTRG.5599 Avicennia marina HOM05D006952 ORTHO05D008687 2.7e-45 185.3 113 67.3
TPR.G1575 Trifolium pratense HOM05D006952 ORTHO05D008687 2.7e-45 185.3 113 69.9
MSTRG.19031 Avicennia marina HOM05D006952 ORTHO05D008687 3.5e-45 184.9 113 70.8
MELO3C009193.2 Cucumis melo HOM05D006952 ORTHO05D008687 4.5e-45 184.5 113 70.8
Migut.J00227 Erythranthe guttata HOM05D006952 ORTHO05D008687 5.9e-45 184.1 113 67.3
Medtr7g066800 Medicago truncatula HOM05D006952 ORTHO05D008687 5.9e-45 184.1 113 70.8
CiPaw.09G205900 Carya illinoinensis HOM05D006952 ORTHO05D008687 1.0e-44 183.3 113 70.8
Phvul.010G008400 Phaseolus vulgaris HOM05D006952 ORTHO05D008687 1.3e-44 183.0 113 71.7
Gohir.A09G163200 Gossypium hirsutum HOM05D006952 ORTHO05D008687 1.7e-44 182.6 113 71.7
PGR031G1789 Punica granatum HOM05D006952 ORTHO05D008687 1.7e-44 182.6 113 69.9
Sed0014444 Sechium edule HOM05D006952 ORTHO05D008687 1.7e-44 182.6 113 70.8
Manes.08G087500 Manihot esculenta HOM05D006952 ORTHO05D008687 2.2e-44 182.2 113 71.7
PGSC0003DMG400020322 Solanum tuberosum HOM05D006952 ORTHO05D008687 2.2e-44 182.2 113 69.0
CAN.G355.18 Capsicum annuum HOM05D006952 ORTHO05D008687 2.9e-44 181.8 113 69.0
Sopen09g007000 Solanum pennellii HOM05D006952 ORTHO05D008687 2.9e-44 181.8 113 69.9
TWI74G1053 Tripterygium wilfordii HOM05D006952 ORTHO05D008687 5.0e-44 181.0 113 73.5
Glyma.03G077100 Glycine max HOM05D006952 ORTHO05D008687 6.5e-44 180.6 113 71.7
Psat0s1978g0040 Pisum sativum HOM05D006952 ORTHO05D008687 6.5e-44 180.6 113 67.3
SalBow5G3631 Salvia bowleyana HOM05D006952 ORTHO05D008687 6.5e-44 180.6 113 69.9
Potri.004G103400 Populus trichocarpa HOM05D006952 ORTHO05D008687 8.5e-44 180.3 113 69.0
RcHm_v2.0_Chr3g0463891 Rosa chinensis HOM05D006952 ORTHO05D008687 8.5e-44 180.3 108 73.1
Duzib106G1795 Durio zibethinus HOM05D006952 ORTHO05D008687 5.5e-43 177.6 113 68.1
Glyma.01G111500 Glycine max HOM05D006952 ORTHO05D008687 9.4e-43 176.8 113 70.8
Potri.016G110900 Populus trichocarpa HOM05D006952 ORTHO05D008687 1.2e-42 176.4 113 68.1
DCAR_024036 Daucus carota HOM05D006952 ORTHO05D008687 2.1e-42 175.6 113 64.6
DCAR_024037 Daucus carota HOM05D006952 ORTHO05D008687 2.1e-42 175.6 113 64.6
Oeu015014.1 Olea europaea HOM05D006952 ORTHO05D008687 2.1e-42 175.6 113 66.4
Potri.006G096200 Populus trichocarpa HOM05D006952 ORTHO05D008687 2.7e-42 175.3 113 67.3
Oeu030529.1 Olea europaea HOM05D006952 ORTHO05D008687 4.7e-42 174.5 110 67.3
Eucgr.B02782 Eucalyptus grandis HOM05D006952 ORTHO05D008687 6.1e-42 174.1 113 67.3
Lalb_Chr19g0124771 Lupinus albus HOM05D006952 ORTHO05D008687 1.0e-41 173.3 113 65.5
FAN09G1020 Fragaria x ananassa HOM05D006952 ORTHO05D008687 1.4e-41 172.9 105 71.4
Manes.09G102000 Manihot esculenta HOM05D006952 ORTHO05D008687 1.4e-41 172.9 113 68.1
Pp3c15_15480 Physcomitrium patens HOM05D006952 ORTHO05D008687 1.8e-41 172.6 111 67.6
Solyc09g013140.3 Solanum lycopersicum HOM05D006952 ORTHO05D008687 2.3e-41 172.2 108 68.5
Actinidia05346 Actinidia chinensis HOM05D006952 ORTHO05D008687 3.0e-41 171.8 103 69.9
SMO116G0119 Selaginella moellendorffii HOM05D006952 ORTHO05D008687 6.8e-41 170.6 113 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2345 Anthoceros agrestis HOM05D001533 ORTHO05D003743 1.2e-40 169.9 110 65.5
Lj3g0025387 Lotus japonicus HOM05D006952 ORTHO05D008687 1.2e-40 169.9 113 66.4
Sed0025859 Sechium edule HOM05D006952 ORTHO05D008687 2.0e-40 169.1 109 67.9
THA.LOC104816220 Tarenaya hassleriana HOM05D006952 ORTHO05D008687 9.8e-40 166.8 108 66.7
Hma1.2p1_0244F.1_g101210 Hydrangea macrophylla HOM05D006952 ORTHO05D008687 1.3e-39 166.4 108 64.8
MD04G1146800 Malus domestica HOM05D006952 ORTHO05D008687 1.3e-39 166.4 108 65.7
Pp3c9_14060 Physcomitrium patens HOM05D006952 ORTHO05D008687 3.7e-39 164.9 110 64.5
Carub.0003s0825 Capsella rubella HOM05D006952 ORTHO05D008687 1.8e-38 162.5 111 61.3
Ah.15g089870 Amaranthus hybridus HOM05D006952 ORTHO05D008687 2.4e-38 162.2 113 64.6
HPP92_012624 Vanilla planifolia HOM05D006952 ORTHO05D008687 2.4e-38 162.2 108 66.7
HanXRQChr13g0406321 Helianthus annuus HOM05D006952 ORTHO05D008687 3.1e-38 161.8 112 63.4
AL3G20160 Arabidopsis lyrata HOM05D006952 ORTHO05D008687 9.1e-38 160.2 111 61.3
CARHR083460 Cardamine hirsuta HOM05D006952 ORTHO05D008687 1.6e-37 159.5 111 63.1
BcaC09g48008 Brassica carinata HOM05D006952 ORTHO05D008687 2.7e-37 158.7 110 61.8
AT3G09085 Arabidopsis thaliana HOM05D006952 ORTHO05D008687 7.7e-37 157.1 111 61.3
Sp3g07540 Schrenkiella parvula HOM05D006952 ORTHO05D008687 1.0e-36 156.8 111 60.4
BraA01t04315Z Brassica rapa HOM05D006952 ORTHO05D008687 2.2e-36 155.6 110 60.9
Thhalv10021991m.g Eutrema salsugineum HOM05D006952 ORTHO05D008687 2.2e-36 155.6 111 60.4
BolC1t05474H Brassica oleracea HOM05D006952 ORTHO05D008687 8.5e-36 153.7 110 60.9
BcaC09g48053 Brassica carinata HOM05D006952 ORTHO05D008687 1.5e-35 152.9 110 60.0
HanXRQChr13g0406361 Helianthus annuus HOM05D006952 ORTHO05D008687 1.9e-35 152.5 103 62.1
HanXRQChr13g0406351 Helianthus annuus HOM05D006952 ORTHO05D008687 3.2e-35 151.8 104 60.6
Lsat_1_v5_gn_5_155300 Lactuca sativa HOM05D006952 ORTHO05D008687 3.2e-35 151.8 102 61.8
DCAR_008639 Daucus carota HOM05D006952 ORTHO05D008687 2.8e-34 148.7 113 57.5
Rhsim04G0165900 Rhododendron simsii HOM05D006952 ORTHO05D008687 6.1e-34 147.5 105 60.0
TPR.G6676 Trifolium pratense HOM05D006952 ORTHO05D008687 8.0e-34 147.1 113 57.5
TPR.G5256 Trifolium pratense HOM05D006952 ORTHO05D008687 1.4e-33 146.4 113 56.6
Lsat_1_v5_gn_5_155361 Lactuca sativa HOM05D006952 ORTHO05D008687 6.8e-33 144.1 108 60.2
Medtr4g014970 Medicago truncatula HOM05D006952 ORTHO05D008687 1.7e-31 139.4 110 55.5
HanXRQChr13g0406341 Helianthus annuus HOM05D006952 ORTHO05D008687 1.1e-30 136.7 111 52.3
Cc02_g31680 Coffea canephora HOM05D006952 ORTHO05D008687 2.4e-30 135.6 100 63.0
Zm00001eb011810 Zea mays HOM05D006952 ORTHO05D008687 2.3e-28 129.0 107 53.3
CSS0036371 Camellia sinensis var. sinensis HOM05D006952 ORTHO05D008687 5.0e-28 127.9 105 55.2
Os03g0265800 Oryza sativa ssp. japonica HOM05D006952 ORTHO05D008687 5.0e-28 127.9 104 53.8
Cc07_g20110 Coffea canephora HOM05D006952 ORTHO05D008687 5.6e-27 124.4 115 56.5
SEGI_04409 Sequoiadendron giganteum HOM05D006952 ORTHO05D008687 1.6e-26 122.9 113 53.1
Sabra06G0073900 Salix brachista HOM05D006952 ORTHO05D008687 1.0e-25 120.2 113 53.1
Mapoly0072s0073 Marchantia polymorpha HOM05D006952 ORTHO05D008687 9.8e-24 113.6 107 48.6
Nitab4.5_0011723g0010 Nicotiana tabacum HOM05D006952 ORTHO05D008687 3.7e-23 111.7 107 49.5
Psat0s1978g0160 Pisum sativum HOM05D006607 ORTHO05D008166 1.2e-21 106.7 98 52.0
GSVIVG01034013001 Vitis vinifera HOM05D006952 ORTHO05D008687 2.7e-21 105.5 52 90.4
Cre03.g188900 Chlamydomonas reinhardtii HOM05D006952 ORTHO05D008687 3.9e-12 75.1 93 40.9
SEGI_08039 Sequoiadendron giganteum HOM05D006952 ORTHO05D008687 8.1e-10 67.4 74 45.9
TAR731G0001 Trochodendron aralioides HOM05D000320 ORTHO05D000532 5.2e-09 64.7 34 82.4
RcHm_v2.0_Chr4g0412041 Rosa chinensis HOM05D006952 ORTHO05D008687 1.2e-08 63.5 41 68.3


User provided reference genes

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