Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3314 Papaver somniferum HOM05D007091 ORTHO05D008768 3.6e-132 474.9 241 100.0
PSO421G0160 Papaver somniferum HOM05D007091 ORTHO05D008768 4.3e-85 318.5 225 76.9
Aqoxy3G04057 Aquilegia oxysepala HOM05D007091 ORTHO05D008768 1.4e-67 260.4 243 62.1
Nn4g24542 Nelumbo nucifera HOM05D007091 ORTHO05D008768 1.5e-66 256.9 241 60.6
TAR629G3120 Trochodendron aralioides HOM05D007091 ORTHO05D008768 1.7e-65 253.4 241 59.3
Potri.012G041400 Populus trichocarpa HOM05D007091 ORTHO05D008768 7.1e-64 248.1 229 62.4
Atru.chr9.1636 Acer truncatum HOM05D007091 ORTHO05D008768 6.0e-63 245.0 229 63.3
Manes.14G173700 Manihot esculenta HOM05D007091 ORTHO05D008768 1.0e-62 244.2 225 60.9
Sabra12G0028500 Salix brachista HOM05D007091 ORTHO05D008768 1.3e-62 243.8 225 61.8
Dinv01447 Davidia involucrata HOM05D007091 ORTHO05D008768 1.1e-61 240.7 240 59.6
Ca_20293_v3 Cicer arietinum L. HOM05D007091 ORTHO05D008768 1.5e-61 240.4 236 61.4
Solyc06g072500.2 Solanum lycopersicum HOM05D007091 ORTHO05D008768 1.9e-61 240.0 236 58.9
Sopen06g028870 Solanum pennellii HOM05D007091 ORTHO05D008768 3.3e-61 239.2 236 59.3
Hma1.2p1_0844F.1_g227450 Hydrangea macrophylla HOM05D007091 ORTHO05D008768 5.6e-61 238.4 246 58.5
Ciclev10026363m.g Citrus clementina HOM05D007091 ORTHO05D008768 9.6e-61 237.7 232 59.5
Cfa020656 Carpinus fangiana HOM05D007091 ORTHO05D008768 1.6e-60 236.9 243 58.0
Dinv32110 Davidia involucrata HOM05D007091 ORTHO05D008768 2.8e-60 236.1 240 58.8
Gohir.D11G227400 Gossypium hirsutum HOM05D007091 ORTHO05D008768 3.6e-60 235.7 231 58.4
vmacro18668 Vaccinium macrocarpon HOM05D007091 ORTHO05D008768 1.1e-59 234.2 237 57.4
Gorai.007G246600 Gossypium raimondii HOM05D007091 ORTHO05D008768 1.4e-59 233.8 231 57.6
CSS0046666 Camellia sinensis var. sinensis HOM05D007091 ORTHO05D008768 2.4e-59 233.0 239 59.8
Cc04_g09250 Coffea canephora HOM05D007091 ORTHO05D008768 3.1e-59 232.6 231 59.7
Gohir.A11G233700 Gossypium hirsutum HOM05D007091 ORTHO05D008768 4.0e-59 232.3 231 58.4
CAN.G65.99 Capsicum annuum HOM05D007091 ORTHO05D008768 5.3e-59 231.9 236 58.5
Duzib264G1108 Durio zibethinus HOM05D007091 ORTHO05D008768 5.3e-59 231.9 231 58.9
RcHm_v2.0_Chr7g0177781 Rosa chinensis HOM05D007091 ORTHO05D008768 2.0e-58 229.9 240 56.7
QL09p036643 Quercus lobata HOM05D007091 ORTHO05D008768 2.6e-58 229.6 239 56.9
Nitab4.5_0005533g0060 Nicotiana tabacum HOM05D007091 ORTHO05D008768 3.4e-58 229.2 238 58.0
FvH4_5g17800 Fragaria vesca HOM05D007091 ORTHO05D008768 5.8e-58 228.4 240 56.2
arahy.Tifrunner.gnm1.ann1.0PBM2M Arachis hypogaea HOM05D007091 ORTHO05D008768 7.6e-58 228.0 234 56.8
CiPaw.15G149800 Carya illinoinensis HOM05D007091 ORTHO05D008768 7.6e-58 228.0 237 57.0
GSVIVG01000383001 Vitis vinifera HOM05D007091 ORTHO05D008768 7.6e-58 228.0 242 55.8
Nitab4.5_0000033g0140 Nicotiana tabacum HOM05D007091 ORTHO05D008768 9.9e-58 227.6 238 57.6
CDE07G0316 Ceratophyllum demersum HOM05D007091 ORTHO05D008768 4.9e-57 225.3 236 57.2
FAN13G0023 Fragaria x ananassa HOM05D007091 ORTHO05D008768 4.9e-57 225.3 240 55.4
Glyma.09G170700 Glycine max HOM05D007091 ORTHO05D008768 1.1e-56 224.2 235 56.6
arahy.Tifrunner.gnm1.ann1.M1K315 Arachis hypogaea HOM05D007091 ORTHO05D008768 1.4e-56 223.8 232 55.6
COL.COLO4_24457 Corchorus olitorius HOM05D007091 ORTHO05D008768 1.4e-56 223.8 234 56.0
Eucgr.H00567 Eucalyptus grandis HOM05D007091 ORTHO05D008768 2.4e-56 223.0 240 54.2
Actinidia34668 Actinidia chinensis HOM05D007091 ORTHO05D008768 3.2e-56 222.6 240 54.6
Lj2g0019861 Lotus japonicus HOM05D007091 ORTHO05D008768 3.2e-56 222.6 241 56.0
Peaxi162Scf01064g00022 Petunia axillaris HOM05D007091 ORTHO05D008768 4.2e-56 222.2 238 55.0
TPR.G31708 Trifolium pratense HOM05D007091 ORTHO05D008768 4.2e-56 222.2 238 56.3
VMungo0464G0064 Vigna mungo HOM05D007091 ORTHO05D008768 5.5e-56 221.9 235 55.7
TWI15G0826 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.2e-55 220.7 240 55.8
Lalb_Chr22g0353631 Lupinus albus HOM05D007091 ORTHO05D008768 3.5e-55 219.2 243 56.4
Thecc.03G065800 Theobroma cacao HOM05D007091 ORTHO05D008768 1.0e-54 217.6 227 55.5
Os05g0387800 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 1.3e-54 217.2 241 55.6
MD06G1234100 Malus domestica HOM05D007091 ORTHO05D008768 2.3e-54 216.5 240 52.1
Migut.I00575 Erythranthe guttata HOM05D007091 ORTHO05D008768 3.9e-54 215.7 232 55.6
Prupe.5G238600 Prunus persica HOM05D007091 ORTHO05D008768 8.7e-54 214.5 239 52.7
SEGI_03292 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 1.1e-53 214.2 244 53.7
C08p18530 Brassica napus HOM05D007091 ORTHO05D008768 2.5e-53 213.0 229 54.6
BolC8t49485H Brassica oleracea HOM05D007091 ORTHO05D008768 4.3e-53 212.2 229 54.1
BcaC07g38895 Brassica carinata HOM05D007091 ORTHO05D008768 5.6e-53 211.8 229 54.6
Lsat_1_v5_gn_2_11841 Lactuca sativa HOM05D007091 ORTHO05D008768 9.6e-53 211.1 228 54.8
SEGI_35239 Sequoiadendron giganteum HOM05D007091 ORTHO05D008768 9.6e-53 211.1 240 52.1
BraA08t34976Z Brassica rapa HOM05D007091 ORTHO05D008768 1.3e-52 210.7 230 53.9
A08p30440 Brassica napus HOM05D007091 ORTHO05D008768 1.6e-52 210.3 229 53.7
AT1G18335 Arabidopsis thaliana HOM05D007091 ORTHO05D008768 2.8e-52 209.5 230 54.3
MD14G1240800 Malus domestica HOM05D007091 ORTHO05D008768 2.8e-52 209.5 227 55.1
HanXRQChr06g0179681 Helianthus annuus HOM05D007091 ORTHO05D008768 4.8e-52 208.8 228 54.8
Atru.chr9.1624 Acer truncatum HOM05D007091 ORTHO05D008768 1.1e-51 207.6 197 62.9
AL1G30710 Arabidopsis lyrata HOM05D007091 ORTHO05D008768 1.8e-51 206.8 230 53.9
CARHR018920 Cardamine hirsuta HOM05D007091 ORTHO05D008768 3.1e-51 206.1 228 55.3
Thhalv10008624m.g Eutrema salsugineum HOM05D007091 ORTHO05D008768 4.0e-51 205.7 232 52.6
Sp1g16300 Schrenkiella parvula HOM05D007091 ORTHO05D008768 4.0e-51 205.7 227 54.2
Medtr6g072100 Medicago truncatula HOM05D007091 ORTHO05D008768 6.9e-51 204.9 238 54.6
BcaB03g12975 Brassica carinata HOM05D007091 ORTHO05D008768 1.2e-50 204.1 230 51.7
DCAR_004559 Daucus carota HOM05D007091 ORTHO05D009263 5.8e-50 201.8 256 51.2
HPP92_007322 Vanilla planifolia HOM05D007091 ORTHO05D008768 7.6e-50 201.4 236 53.0
MELO3C001924.2 Cucumis melo HOM05D007091 ORTHO05D008768 1.0e-49 201.1 238 51.3
Zm00001eb256360 Zea mays HOM05D007091 ORTHO05D008768 1.3e-49 200.7 216 56.9
FAN04G2000 Fragaria x ananassa HOM05D007091 ORTHO05D008768 2.9e-49 199.5 219 55.3
Haze_18937 Corylus avellana HOM05D007091 ORTHO05D008768 4.9e-49 198.7 209 57.9
BcaNung05442 Brassica carinata HOM05D005614 ORTHO05D006759 6.5e-49 198.4 222 52.7
ClCG04G012810 Citrullus lanatus HOM05D007091 ORTHO05D008768 6.5e-49 198.4 237 50.6
Aa31LG7G2780 Aethionema arabicum HOM05D007091 ORTHO05D008768 1.1e-48 197.6 226 53.1
Carub.0001s1796 Capsella rubella HOM05D007091 ORTHO05D008768 1.1e-48 197.6 230 53.0
CANSAT35G2054 Cannabis sativa HOM05D007091 ORTHO05D008768 1.9e-48 196.8 239 51.0
SMO347G0535 Selaginella moellendorffii HOM05D007091 ORTHO05D008768 1.9e-48 196.8 225 53.3
Sc10g0009000 Simmondsia chinensis HOM05D007091 ORTHO05D008768 1.9e-48 196.8 233 51.9
ATR0598G099 Amborella trichopoda HOM05D007091 ORTHO05D008768 3.2e-48 196.1 196 58.2
EL10Ac1g00193 Beta vulgaris HOM05D007091 ORTHO05D008768 4.6e-47 192.2 186 59.7
SGA_v2.0_scaffold40G15610 Striga asiatica HOM05D007091 ORTHO05D008768 1.0e-46 191.0 201 56.7
CsaV3_1G004900 Cucumis sativus L. HOM05D007091 ORTHO05D008768 6.7e-46 188.3 227 50.7
Oeu058744.1 Olea europaea HOM05D007091 ORTHO05D008768 3.3e-45 186.0 178 62.9
Os02g0772300 Oryza sativa ssp. japonica HOM05D007091 ORTHO05D008768 3.3e-45 186.0 201 55.2
Pp3c17_14350 Physcomitrium patens HOM05D007091 ORTHO05D008768 3.3e-45 186.0 195 53.3
Psat1g124480 Pisum sativum HOM05D007091 ORTHO05D008768 3.3e-45 186.0 206 55.3
Mapoly0049s0094 Marchantia polymorpha HOM05D007091 ORTHO05D008768 1.3e-44 184.1 244 46.3
Phvul.004G146400 Phaseolus vulgaris HOM05D007091 ORTHO05D008768 4.1e-43 179.1 170 59.4
MSTRG.11241 Avicennia marina HOM05D007091 ORTHO05D008768 5.9e-42 175.3 164 59.1
Pp3c9_11360 Physcomitrium patens HOM05D000137 ORTHO05D000382 2.2e-41 173.3 192 50.5
AUR62004555 Chenopodium quinoa HOM05D007091 ORTHO05D008768 4.2e-40 169.1 169 56.8
Pp3c15_11610 Physcomitrium patens HOM05D000137 ORTHO05D008768 7.2e-40 168.3 225 42.7
Hund27153 Selenicereus undatus HOM05D007091 ORTHO05D008768 8.7e-38 161.4 231 46.3
AUR62022670 Chenopodium quinoa HOM05D007091 ORTHO05D008768 1.9e-37 160.2 169 56.2
AagrBONN_evm.TU.Sc2ySwM_228.1246 Anthoceros agrestis HOM05D007091 ORTHO05D008768 2.8e-36 156.4 204 46.1
ECA238G0701 Erigeron canadensis HOM05D007091 ORTHO05D008768 4.8e-36 155.6 158 57.0
SHI19106 Sapria himalayana HOM05D007091 ORTHO05D008768 4.8e-36 155.6 160 56.9
Sed0004344 Sechium edule HOM05D007091 ORTHO05D008768 1.9e-32 143.7 193 47.7
PGSC0003DMG401027044 Solanum tuberosum HOM05D007091 ORTHO05D008768 3.2e-32 142.9 139 59.0
Lj9P415T25 Lonicera japonica HOM05D007091 ORTHO05D008768 4.4e-29 132.5 134 56.0
MCO05G578 Micromonas commoda HOM05D007091 ORTHO05D008768 2.2e-25 120.2 229 37.6
unitig_21.g20331 Utricularia gibba HOM05D007091 ORTHO05D008768 1.2e-23 114.4 101 63.4
BcaC03g18194 Brassica carinata HOM05D007091 ORTHO05D008768 6.7e-22 108.6 118 53.4
PSO832G1393 Papaver somniferum HOM05D007091 ORTHO05D008768 3.3e-21 106.3 89 67.4
TWI81G1026 Tripterygium wilfordii HOM05D007091 ORTHO05D008768 1.8e-19 100.5 123 54.5
CBR_g40646 Chara braunii HOM05D007091 ORTHO05D008768 2.2e-17 93.6 374 27.3
C02p62570 Brassica napus HOM05D001735 ORTHO05D001640 3.8e-17 92.8 77 59.7
MCO07G264 Micromonas commoda HOM05D007091 ORTHO05D008768 2.3e-14 83.6 137 43.1
BolC2t12316H Brassica oleracea HOM05D007091 ORTHO05D008768 4.0e-14 82.8 88 53.4
Cre10.g431450 Chlamydomonas reinhardtii HOM05D007091 ORTHO05D008768 4.1e-11 72.8 161 34.8
PRCOL_00001323 Prasinoderma coloniale HOM05D007091 ORTHO05D008768 9.4e-08 61.6 131 36.6


User provided reference genes

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