Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 2.2e-200 702.2 390 100.0
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 2.2e-195 685.6 390 97.4
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 1.5e-140 503.4 334 71.9
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 6.4e-139 498.0 333 70.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 2.3e-136 489.6 333 68.2
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 5.1e-136 488.4 341 68.3
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 4.3e-135 485.3 330 71.2
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 9.5e-135 484.2 329 69.9
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 1.1e-133 480.7 333 67.0
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.4e-133 480.3 341 67.4
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 3.1e-133 479.2 327 69.1
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 4.0e-133 478.8 331 69.2
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 5.2e-133 478.4 324 69.8
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 8.9e-133 477.6 324 69.8
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 1.2e-132 477.2 334 68.0
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 1.5e-132 476.9 331 68.0
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 1.5e-132 476.9 338 67.2
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 2.0e-132 476.5 330 68.5
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 2.6e-132 476.1 327 70.0
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 3.4e-132 475.7 338 68.0
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 5.8e-132 474.9 324 68.5
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 7.6e-132 474.6 331 67.7
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 9.9e-132 474.2 320 70.3
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 2.9e-131 472.6 332 67.5
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 3.7e-131 472.2 330 70.0
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.7e-131 472.2 329 67.8
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 4.9e-131 471.9 341 67.4
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 6.4e-131 471.5 330 66.7
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 6.4e-131 471.5 335 67.8
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 6.4e-131 471.5 334 67.1
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 8.4e-131 471.1 324 67.9
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.4e-130 470.3 321 69.8
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 2.4e-130 469.5 327 69.4
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 5.4e-130 468.4 321 67.6
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 1.2e-129 467.2 325 67.7
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 2.7e-129 466.1 316 70.6
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 3.5e-129 465.7 330 66.7
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 3.5e-129 465.7 333 67.0
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 7.8e-129 464.5 330 65.2
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 1.0e-128 464.2 323 68.7
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 1.0e-128 464.2 331 65.3
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.3e-128 463.8 333 67.0
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.7e-128 463.4 333 66.1
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 3.0e-128 462.6 322 67.4
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 3.9e-128 462.2 323 68.4
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 3.9e-128 462.2 328 68.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 1.5e-127 460.3 326 67.8
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 1.9e-127 459.9 326 66.9
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 1.9e-127 459.9 334 65.6
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 2.5e-127 459.5 333 66.4
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 4.3e-127 458.8 339 64.3
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 4.3e-127 458.8 321 67.0
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 2.1e-126 456.4 331 67.1
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 2.1e-126 456.4 331 67.1
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 2.1e-126 456.4 333 66.4
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 2.1e-126 456.4 333 66.4
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 2.1e-126 456.4 322 68.0
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 3.6e-126 455.7 336 64.9
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 4.7e-126 455.3 330 66.1
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 6.2e-126 454.9 310 68.4
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 6.2e-126 454.9 332 66.6
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 6.2e-126 454.9 332 65.7
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 1.1e-125 454.1 335 66.3
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 1.1e-125 454.1 333 66.1
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.4e-125 453.8 331 67.7
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.4e-125 453.0 308 68.5
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.4e-125 453.0 333 64.9
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 3.1e-125 452.6 328 66.8
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 8.9e-125 451.1 337 63.8
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 8.9e-125 451.1 333 65.2
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 8.9e-125 451.1 331 65.0
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 8.9e-125 451.1 321 65.7
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 1.2e-124 450.7 328 66.8
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 1.2e-124 450.7 328 66.8
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 1.5e-124 450.3 333 63.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 2.6e-124 449.5 321 65.7
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 3.4e-124 449.1 333 65.5
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 5.8e-124 448.4 330 65.2
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 1.3e-123 447.2 324 66.7
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.9e-123 446.0 316 64.9
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 3.8e-123 445.7 327 65.7
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 1.1e-122 444.1 317 67.2
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 6.0e-121 438.3 333 63.7
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.7e-120 436.8 327 63.9
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.0e-120 436.0 357 59.7
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 5.6e-119 431.8 327 63.0
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 7.3e-119 431.4 338 61.8
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 6.2e-118 428.3 343 62.1
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 6.2e-118 428.3 327 63.3
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 9.0e-117 424.5 302 66.9
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 2.0e-116 423.3 337 60.2
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 9.9e-116 421.0 334 62.9
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.1e-114 417.5 291 66.7
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.4e-114 417.2 432 50.9
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 9.3e-114 414.5 325 62.5
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 5.6e-111 405.2 305 63.9
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 2.4e-109 399.8 328 59.8
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 4.5e-108 395.6 318 61.9
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 5.5e-106 388.7 290 63.8
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 3.8e-99 365.9 325 56.3
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.8e-93 347.1 341 52.2
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 1.8e-93 347.1 275 64.7
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 3.5e-89 332.8 247 63.2
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 6.1e-89 332.0 309 53.7
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 7.9e-89 331.6 309 54.0
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 8.7e-88 328.2 340 52.9
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 3.0e-72 276.6 229 62.9
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.3e-38 164.9 99 71.7
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 7.3e-34 149.1 332 34.0
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 6.4e-30 136.0 93 66.7
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.4e-24 118.2 141 47.5
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.4e-23 113.2 65 72.3
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 4.4e-23 113.2 79 63.3
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.1e-16 92.0 47 89.4
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 5.2e-16 89.7 48 85.4
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 1.3e-11 75.1 51 56.9
MD11G1162700 Malus domestica HOM05D006704 ORTHO05D008635 3.6e-09 67.0 128 32.0
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.2e-07 62.0 48 60.4
PSO541G0451 Papaver somniferum HOM05D006704 ORTHO05D305146 2.0e-07 61.2 36 77.8


User provided reference genes

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