Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3225 Papaver somniferum HOM05D005608 ORTHO05D007543 7.4e-169 597.0 285 100.0
PSO339G6269 Papaver somniferum HOM05D005608 ORTHO05D007543 1.8e-167 592.4 285 98.9
Duzib106G2070 Durio zibethinus HOM05D005608 ORTHO05D007543 2.2e-152 542.3 285 88.4
Gohir.A01G193800 Gossypium hirsutum HOM05D005608 ORTHO05D007543 2.2e-152 542.3 285 88.1
Gohir.D01G184100 Gossypium hirsutum HOM05D005608 ORTHO05D007543 6.3e-152 540.8 285 88.8
Gorai.002G227600 Gossypium raimondii HOM05D005608 ORTHO05D007543 6.3e-152 540.8 285 88.8
GSVIVG01033232001 Vitis vinifera HOM05D005608 ORTHO05D007543 8.2e-152 540.4 284 87.0
QL07p003736 Quercus lobata HOM05D005608 ORTHO05D007543 1.1e-151 540.0 284 89.1
Thecc.05G148100 Theobroma cacao HOM05D005608 ORTHO05D007543 1.4e-151 539.7 285 87.4
Prupe.7G053400 Prunus persica HOM05D005608 ORTHO05D007543 6.9e-151 537.3 286 88.1
CiPaw.09G040300 Carya illinoinensis HOM05D005608 ORTHO05D007543 1.5e-150 536.2 284 88.4
Nn2g15128 Nelumbo nucifera HOM05D005608 ORTHO05D007543 1.5e-150 536.2 283 88.0
MD14G1077300 Malus domestica HOM05D005608 ORTHO05D007543 2.0e-150 535.8 284 87.0
Oeu017928.1 Olea europaea HOM05D005608 ORTHO05D007543 2.0e-150 535.8 283 87.6
TWI77G0221 Tripterygium wilfordii HOM05D005608 ORTHO05D007543 2.6e-150 535.4 285 85.3
Manes.08G052000 Manihot esculenta HOM05D005608 ORTHO05D007543 3.4e-150 535.0 285 87.4
Nitab4.5_0001618g0150 Nicotiana tabacum HOM05D005608 ORTHO05D007543 1.0e-149 533.5 285 87.0
Aqoxy2G00245 Aquilegia oxysepala HOM05D005608 ORTHO05D007543 1.7e-149 532.7 285 87.0
RcHm_v2.0_Chr3g0483631 Rosa chinensis HOM05D005608 ORTHO05D007543 5.0e-149 531.2 285 87.0
Actinidia39202 Actinidia chinensis HOM05D005608 ORTHO05D007543 1.1e-148 530.0 285 86.0
Lj1A1125T63 Lonicera japonica HOM05D005608 ORTHO05D007543 1.1e-148 530.0 288 86.8
Atru.chr1.1230 Acer truncatum HOM05D005608 ORTHO05D007543 1.9e-148 529.3 285 86.7
Nitab4.5_0000826g0060 Nicotiana tabacum HOM05D005608 ORTHO05D007543 4.2e-148 528.1 285 86.7
Phvul.007G250500 Phaseolus vulgaris HOM05D005608 ORTHO05D007543 4.2e-148 528.1 284 84.9
TAR369G0715 Trochodendron aralioides HOM05D005608 ORTHO05D007543 4.2e-148 528.1 282 87.2
TAR633G2234 Trochodendron aralioides HOM05D005608 ORTHO05D007543 4.2e-148 528.1 285 86.3
Haze_19791 Corylus avellana HOM05D005608 ORTHO05D007543 7.2e-148 527.3 284 87.3
Haze_19795 Corylus avellana HOM05D005608 ORTHO05D007543 7.2e-148 527.3 284 87.3
CSS0026365 Camellia sinensis var. sinensis HOM05D005608 ORTHO05D007543 1.2e-147 526.6 285 84.9
CAN.G676.7 Capsicum annuum HOM05D005608 ORTHO05D007543 2.1e-147 525.8 285 85.3
Sabra06G0032700 Salix brachista HOM05D005608 ORTHO05D007543 2.1e-147 525.8 285 84.9
EL10Ac3g07137 Beta vulgaris HOM05D005608 ORTHO05D007543 3.6e-147 525.0 285 84.9
Hma1.2p1_0110F.1_g052840 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.6e-147 525.0 285 85.3
Hma1.2p1_1997F.1_g310445 Hydrangea macrophylla HOM05D005608 ORTHO05D007543 3.6e-147 525.0 285 85.3
PGSC0003DMG401012699 Solanum tuberosum HOM05D005608 ORTHO05D007543 3.6e-147 525.0 285 84.9
MSTRG.26133 Avicennia marina HOM05D005608 ORTHO05D007543 4.7e-147 524.6 284 86.3
Cfa016779 Carpinus fangiana HOM05D005608 ORTHO05D007543 7.9e-147 523.9 284 87.0
TAR369G0194 Trochodendron aralioides HOM05D005608 ORTHO05D007543 1.4e-146 523.1 282 86.5
Solyc04g016360.3 Solanum lycopersicum HOM05D005608 ORTHO05D007543 1.8e-146 522.7 285 85.3
Potri.006G047000 Populus trichocarpa HOM05D005608 ORTHO05D007543 3.0e-146 521.9 285 84.2
Hund24681 Selenicereus undatus HOM05D005608 ORTHO05D007543 3.9e-146 521.5 285 84.6
MELO3C026333.2 Cucumis melo HOM05D005608 ORTHO05D007543 1.1e-145 520.0 284 83.5
Glyma.10G106900 Glycine max HOM05D005608 ORTHO05D007543 2.6e-145 518.8 282 84.8
Sc19g0008540 Simmondsia chinensis HOM05D005608 ORTHO05D007543 2.6e-145 518.8 285 84.6
FAN02G1028 Fragaria x ananassa HOM05D005608 ORTHO05D007543 3.3e-145 518.5 284 84.5
Sopen04g008450 Solanum pennellii HOM05D005608 ORTHO05D007543 3.3e-145 518.5 285 84.2
FAN05G0975 Fragaria x ananassa HOM05D005608 ORTHO05D007543 5.7e-145 517.7 286 84.6
CANSAT80G2626 Cannabis sativa HOM05D005608 ORTHO05D007543 7.4e-145 517.3 285 84.9
Rhsim03G0028900 Rhododendron simsii HOM05D005608 ORTHO05D007543 7.4e-145 517.3 289 84.4
MSTRG.19838 Avicennia marina HOM05D005608 ORTHO05D007543 9.7e-145 516.9 281 84.7
Lj5g0018305 Lotus japonicus HOM05D005608 ORTHO05D007543 1.7e-144 516.2 285 84.2
Ciclev10005572m.g Citrus clementina HOM05D005608 ORTHO05D007543 2.2e-144 515.8 285 84.9
FvH4_6g24520 Fragaria vesca HOM05D005608 ORTHO05D007543 2.2e-144 515.8 285 84.2
SalBow6G4364 Salvia bowleyana HOM05D005608 ORTHO05D007543 2.8e-144 515.4 282 83.7
Aa31LG1G23580 Aethionema arabicum HOM05D005608 ORTHO05D007543 6.3e-144 514.2 286 83.6
Glyma.02G186700 Glycine max HOM05D005608 ORTHO05D007543 6.3e-144 514.2 284 84.2
vmacro21968 Vaccinium macrocarpon HOM05D005608 ORTHO05D007543 6.3e-144 514.2 285 83.9
VMungo0720G2960 Vigna mungo HOM05D005608 ORTHO05D007543 6.3e-144 514.2 284 82.7
Sed0023334 Sechium edule HOM05D005608 ORTHO05D007543 8.2e-144 513.8 284 82.7
Cc06_g18100 Coffea canephora HOM05D005608 ORTHO05D007543 2.4e-143 512.3 284 83.8
DCAR_013613 Daucus carota HOM05D005608 ORTHO05D007543 3.1e-143 511.9 283 82.3
Eucgr.K02019 Eucalyptus grandis HOM05D005608 ORTHO05D007543 6.9e-143 510.8 287 83.6
Lalb_Chr06g0173501 Lupinus albus HOM05D005608 ORTHO05D007543 1.2e-142 510.0 284 84.5
CsaV3_4G027510 Cucumis sativus L. HOM05D005608 ORTHO05D007543 2.6e-142 508.8 284 82.0
SGA_v2.0_scaffold273G46432 Striga asiatica HOM05D005608 ORTHO05D007543 2.6e-142 508.8 273 85.0
CANSAT80G0897 Cannabis sativa HOM05D005608 ORTHO05D007543 3.4e-142 508.4 290 83.1
THA.LOC104801987 Tarenaya hassleriana HOM05D005608 ORTHO05D007543 3.4e-142 508.4 284 82.4
arahy.Tifrunner.gnm1.ann1.RCN63F Arachis hypogaea HOM05D005608 ORTHO05D007543 5.9e-142 507.7 284 84.5
BcaNung04068 Brassica carinata HOM05D005608 ORTHO05D007543 7.7e-142 507.3 285 82.8
HanXRQChr04g0125051 Helianthus annuus HOM05D005608 ORTHO05D007543 7.7e-142 507.3 281 84.0
FAN14G1555 Fragaria x ananassa HOM05D005608 ORTHO05D007543 1.0e-141 506.9 288 82.6
CARHR136660 Cardamine hirsuta HOM05D005608 ORTHO05D007543 1.7e-141 506.1 285 83.2
AT2G41530 Arabidopsis thaliana HOM05D005608 ORTHO05D007543 6.5e-141 504.2 280 84.3
Thhalv10017045m.g Eutrema salsugineum HOM05D005608 ORTHO05D007543 1.1e-140 503.4 285 81.1
Sp4g23810 Schrenkiella parvula HOM05D005608 ORTHO05D007543 1.4e-140 503.1 285 81.4
Peaxi162Scf00130g00829 Petunia axillaris HOM05D005608 ORTHO05D007543 7.2e-140 500.7 285 81.8
AL4G39630 Arabidopsis lyrata HOM05D005608 ORTHO05D007543 9.4e-140 500.4 285 81.8
Migut.J01725 Erythranthe guttata HOM05D005608 ORTHO05D007543 1.2e-139 500.0 283 82.7
TPR.G19657 Trifolium pratense HOM05D005608 ORTHO05D007543 2.1e-139 499.2 283 82.7
Carub.0004s2382 Capsella rubella HOM05D005608 ORTHO05D007543 1.0e-138 496.9 285 81.4
BcaC01g05330 Brassica carinata HOM05D005608 ORTHO05D007543 2.3e-138 495.7 285 80.7
BcaB01g03463 Brassica carinata HOM05D005608 ORTHO05D007543 5.2e-138 494.6 285 80.4
C04p02790 Brassica napus HOM05D005608 ORTHO05D007543 5.2e-138 494.6 286 82.2
BolC4t21919H Brassica oleracea HOM05D005608 ORTHO05D007543 5.2e-138 494.6 286 82.2
AUR62026096 Chenopodium quinoa HOM05D005608 ORTHO05D007543 5.2e-138 494.6 302 77.5
A03p23310 Brassica napus HOM05D005608 ORTHO05D007543 6.7e-138 494.2 285 80.0
C03p27830 Brassica napus HOM05D005608 ORTHO05D007543 6.7e-138 494.2 285 80.7
BraA03t11549Z Brassica rapa HOM05D005608 ORTHO05D007543 6.7e-138 494.2 285 80.0
Medtr1g052175 Medicago truncatula HOM05D005608 ORTHO05D007543 6.7e-138 494.2 279 82.8
HPP92_001434 Vanilla planifolia HOM05D005608 ORTHO05D007543 6.7e-138 494.2 280 81.4
arahy.Tifrunner.gnm1.ann1.QZL5XH Arachis hypogaea HOM05D005608 ORTHO05D007543 8.8e-138 493.8 298 79.9
Peaxi162Scf00130g00828 Petunia axillaris HOM05D005608 ORTHO05D007543 8.8e-138 493.8 285 82.8
BolC3t15154H Brassica oleracea HOM05D005608 ORTHO05D007543 1.1e-137 493.4 285 80.4
Medtr4g008660 Medicago truncatula HOM05D005608 ORTHO05D007543 4.4e-137 491.5 279 82.4
BraA05t19229Z Brassica rapa HOM05D005608 ORTHO05D007543 7.4e-137 490.7 286 81.8
CDE05G0378 Ceratophyllum demersum HOM05D005608 ORTHO05D007543 7.4e-137 490.7 279 79.2
A05p02350 Brassica napus HOM05D005608 ORTHO05D007543 1.3e-136 490.0 286 81.5
Nitab4.5_0000636g0050 Nicotiana tabacum HOM05D005608 ORTHO05D007543 3.7e-136 488.4 285 80.4
ECA236G2378 Erigeron canadensis HOM05D005608 ORTHO05D007543 3.1e-135 485.3 271 82.3
Sed0008486 Sechium edule HOM05D005608 ORTHO05D007543 1.2e-134 483.4 284 78.2
ClCG04G003700 Citrullus lanatus HOM05D005608 ORTHO05D007543 2.0e-134 482.6 284 79.2
Ca_12257_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 1.7e-133 479.6 278 81.3
Lsat_1_v5_gn_8_82180 Lactuca sativa HOM05D005608 ORTHO05D007543 1.7e-133 479.6 329 69.9
ATR0721G011 Amborella trichopoda HOM05D005608 ORTHO05D007543 3.6e-131 471.9 277 78.3
Ca_12243_v3 Cicer arietinum L. HOM05D005608 ORTHO05D007543 8.0e-131 470.7 282 79.1
SEGI_13354 Sequoiadendron giganteum HOM05D005608 ORTHO05D007543 1.7e-128 463.0 280 76.4
Cpa.g.sc182.15 Carica papaya HOM05D005608 ORTHO05D007543 2.2e-128 462.6 247 87.0
Os01g0939700 Oryza sativa ssp. japonica HOM05D005608 ORTHO05D007543 2.7e-126 455.7 276 75.4
Sed0024564 Sechium edule HOM05D005608 ORTHO05D007543 1.1e-124 450.3 284 73.9
Eucgr.K01713 Eucalyptus grandis HOM05D005608 ORTHO05D007543 9.8e-121 437.2 275 74.9
unitig_21.g20519 Utricularia gibba HOM05D005608 ORTHO05D007543 1.7e-120 436.4 287 75.3
AUR62024510 Chenopodium quinoa HOM05D005608 ORTHO05D007543 1.8e-119 433.0 236 85.2
MBI19_g29889_MAGBIO Magnolia biondii HOM05D005608 ORTHO05D007543 2.4e-119 432.6 234 84.2
Pp3c11_8660 Physcomitrium patens HOM05D005608 ORTHO05D007543 2.5e-116 422.5 282 69.1
MD12G1082500 Malus domestica HOM05D005608 ORTHO05D007543 8.9e-114 414.1 225 86.2
Mapoly0020s0136 Marchantia polymorpha HOM05D005608 ORTHO05D007543 4.5e-110 401.7 281 66.9
CBR_g12387 Chara braunii HOM05D005608 ORTHO05D007543 1.8e-106 389.8 284 66.2
SMO174G0027 Selaginella moellendorffii HOM05D005608 ORTHO05D007543 9.8e-105 384.0 276 65.2
Dinv39657 Davidia involucrata HOM05D005608 ORTHO05D007543 1.7e-104 383.3 196 89.8
Zm00001eb363240 Zea mays HOM05D005608 ORTHO05D007543 1.1e-100 370.5 219 78.1
Cre03.g158800 Chlamydomonas reinhardtii HOM05D005608 ORTHO05D007543 3.6e-91 339.0 283 58.0
SalBow6G3992 Salvia bowleyana HOM05D005608 ORTHO05D007543 8.1e-91 337.8 289 59.9
COL.COLO4_32782 Corchorus olitorius HOM05D005608 ORTHO05D007543 1.2e-89 334.0 273 62.3
Psat6g091560 Pisum sativum HOM05D005608 ORTHO05D007543 3.2e-79 299.3 171 84.2
TPR.G19661 Trifolium pratense HOM05D005608 ORTHO05D007543 3.5e-78 295.8 167 83.8
Haze_27232 Corylus avellana HOM05D005608 ORTHO05D007543 6.2e-75 285.0 309 47.9
Haze_26706 Corylus avellana HOM05D005608 ORTHO05D007543 6.9e-66 255.0 273 48.0
PRCOL_00003320 Prasinoderma coloniale HOM05D000219 ORTHO05D000226 8.7e-61 238.0 278 47.5
MCO09G089 Micromonas commoda HOM05D000219 ORTHO05D000226 1.1e-60 237.7 277 45.8
Medtr0931s0010 Medicago truncatula HOM05D005608 ORTHO05D044358 3.7e-59 232.6 229 52.0
Medtr1g052165 Medicago truncatula HOM05D005608 ORTHO05D048895 2.1e-51 206.8 114 81.6
TPR.G23055 Trifolium pratense HOM05D005608 ORTHO05D048895 5.7e-44 182.2 103 78.6
Zm00001eb010250 Zea mays HOM05D005608 ORTHO05D007543 3.9e-21 106.3 78 64.1
Zm00001eb141600 Zea mays HOM05D005608 ORTHO05D007543 2.5e-15 87.0 78 53.8
SEGI_35043 Sequoiadendron giganteum HOM05D005608 ORTHO05D384886 2.3e-13 80.5 71 56.3
Pp3c1_10050 Physcomitrium patens HOM05D005608 ORTHO05D319324 3.4e-12 76.6 79 46.8
PSO765G0043 Papaver somniferum HOM05D005608 ORTHO05D302623 1.6e-06 57.8 47 66.0


User provided reference genes

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