Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 7.3e-104 380.6 191 100.0
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 1.7e-60 236.5 121 95.9
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 2.6e-32 142.9 118 60.2
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 1.1e-30 137.5 117 58.1
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 2.0e-29 133.3 118 61.0
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 2.0e-29 133.3 116 57.8
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 5.9e-29 131.7 119 59.7
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 5.9e-29 131.7 117 58.1
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 1.1e-27 127.5 119 55.5
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 1.4e-27 127.1 119 59.7
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 2.5e-27 126.3 117 55.6
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 7.2e-27 124.8 121 52.9
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 7.2e-27 124.8 117 56.4
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 7.2e-27 124.8 117 56.4
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 9.4e-27 124.4 117 57.3
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 9.4e-27 124.4 117 57.3
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 9.4e-27 124.4 117 56.4
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 9.4e-27 124.4 117 57.3
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 1.0e-25 120.9 115 52.2
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 1.0e-25 120.9 122 51.6
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 1.8e-25 120.2 116 54.3
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 1.8e-25 120.2 116 56.0
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 3.9e-25 119.0 116 54.3
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 3.9e-25 119.0 116 55.2
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 6.7e-25 118.2 100 57.0
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 8.8e-25 117.9 117 50.4
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 2.0e-24 116.7 118 55.1
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 3.3e-24 115.9 120 52.5
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 5.7e-24 115.2 120 53.3
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 7.4e-24 114.8 123 51.2
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 1.3e-23 114.0 118 47.5
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 1.3e-23 114.0 118 53.4
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 1.7e-23 113.6 116 52.6
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 1.7e-23 113.6 117 54.7
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.7e-23 113.6 116 51.7
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 2.8e-23 112.8 117 47.9
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 8.2e-23 111.3 116 50.0
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 1.1e-22 110.9 116 48.3
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 1.1e-22 110.9 120 50.0
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 1.8e-22 110.2 121 51.2
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 2.4e-22 109.8 114 54.4
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 3.1e-22 109.4 115 50.4
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 3.1e-22 109.4 116 49.1
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 3.1e-22 109.4 117 53.0
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 4.1e-22 109.0 115 53.0
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 4.1e-22 109.0 116 50.9
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 9.1e-22 107.8 116 50.0
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 9.1e-22 107.8 122 49.2
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.2e-21 107.5 105 57.1
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 2.0e-21 106.7 116 47.4
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 2.0e-21 106.7 115 50.4
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 2.6e-21 106.3 118 50.0
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 2.6e-21 106.3 118 50.0
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 5.9e-21 105.1 116 47.4
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 5.9e-21 105.1 115 48.7
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 7.7e-21 104.8 111 47.7
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 7.7e-21 104.8 122 51.6
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 7.7e-21 104.8 115 51.3
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 7.7e-21 104.8 133 47.4
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 1.3e-20 104.0 116 50.9
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 1.7e-20 103.6 119 48.7
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.9e-20 102.8 122 48.4
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 8.5e-20 101.3 128 44.5
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 1.1e-19 100.9 114 50.9
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 1.1e-19 100.9 119 48.7
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 1.5e-19 100.5 119 51.3
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 1.5e-19 100.5 121 47.1
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 1.5e-19 100.5 121 47.1
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 1.5e-19 100.5 117 48.7
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 1.5e-19 100.5 119 44.5
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 1.9e-19 100.1 115 47.8
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 2.5e-19 99.8 121 47.1
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 4.2e-19 99.0 118 46.6
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 5.5e-19 98.6 129 45.7
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 7.2e-19 98.2 101 50.5
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 1.2e-18 97.4 119 45.4
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.6e-18 97.1 103 51.5
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 2.7e-18 96.3 121 46.3
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 3.6e-18 95.9 116 49.1
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 3.6e-18 95.9 119 47.9
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 6.1e-18 95.1 122 45.9
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 8.0e-18 94.7 122 45.9
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 4.0e-17 92.4 115 41.7
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 4.0e-17 92.4 133 40.6
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 1.2e-16 90.9 115 45.2
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 3.3e-16 89.4 81 53.1
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 7.5e-16 88.2 78 53.8
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 1.3e-15 87.4 94 47.9
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.8e-15 86.3 116 40.5
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.8e-15 86.3 101 48.5
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 2.4e-14 83.2 114 43.9
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 4.5e-13 79.0 117 41.0
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 5.9e-13 78.6 79 49.4
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 5.0e-12 75.5 88 46.6
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 8.5e-12 74.7 53 58.5
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 2.5e-11 73.2 88 46.6
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 2.7e-10 69.7 100 46.0
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 6.1e-10 68.6 199 29.6
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 1.0e-09 67.8 84 42.9
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 1.4e-09 67.4 112 36.6
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.4e-09 67.4 90 40.0
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 1.4e-09 67.4 121 33.1
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 1.8e-09 67.0 48 64.6
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 2.3e-09 66.6 81 45.7
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 4.0e-09 65.9 81 42.0
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 6.8e-09 65.1 113 37.2
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 2.0e-08 63.5 50 58.0
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 3.4e-08 62.8 80 40.0
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 1.3e-07 60.8 85 41.2
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 2.2e-07 60.1 85 42.4
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 2.2e-07 60.1 85 42.4
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 7.0e-06 55.1 116 34.5
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 9.1e-06 54.7 127 32.3


User provided reference genes

Program Settings