Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3211 Papaver somniferum HOM05D028390 ORTHO05D021353 4.7e-160 567.8 277 100.0
PSO384G0348 Papaver somniferum HOM05D028390 ORTHO05D021353 2.7e-51 206.5 275 42.9
PSO210G1786 Papaver somniferum HOM05D028390 ORTHO05D021353 3.9e-42 176.0 264 42.0
PSO384G4914 Papaver somniferum HOM05D028390 ORTHO05D021353 4.1e-39 166.0 223 38.1
PSO170G1155 Papaver somniferum HOM05D002080 ORTHO05D002062 5.2e-18 95.9 147 34.0
Psat2g119560 Pisum sativum HOM05D000001 ORTHO05D000501 9.5e-12 75.1 214 26.6
Psat2g119520 Pisum sativum HOM05D000001 ORTHO05D000501 1.2e-11 74.7 214 26.2
Psat2g119640 Pisum sativum HOM05D000001 ORTHO05D000501 8.0e-11 72.0 192 27.1
Cfa000496 Carpinus fangiana HOM05D000001 ORTHO05D000501 1.4e-10 71.2 140 31.4
Ah.03g135030 Amaranthus hybridus HOM05D000001 ORTHO05D000501 4.0e-10 69.7 180 25.6
Oeu022759.1 Olea europaea HOM05D000001 ORTHO05D000501 4.0e-10 69.7 201 23.9
Peaxi162Scf00222g00322 Petunia axillaris HOM05D000001 ORTHO05D000501 4.0e-10 69.7 180 26.7
QL03p068781 Quercus lobata HOM05D000001 ORTHO05D000501 8.9e-10 68.6 199 28.1
AUR62005793 Chenopodium quinoa HOM05D000001 ORTHO05D000501 1.2e-09 68.2 190 24.7
AUR62032783 Chenopodium quinoa HOM05D000001 ORTHO05D000501 1.2e-09 68.2 190 24.7
CANSAT64G0303 Cannabis sativa HOM05D000001 ORTHO05D000501 3.4e-09 66.6 182 26.9
Eucgr.G02497 Eucalyptus grandis HOM05D000001 ORTHO05D000501 3.4e-09 66.6 192 26.6
Haze_06420 Corylus avellana HOM05D003185 ORTHO05D009915 4.4e-09 66.2 139 28.1
Dinv16652 Davidia involucrata HOM05D000001 ORTHO05D000501 9.8e-09 65.1 157 27.4
GSVIVG01019974001 Vitis vinifera HOM05D000001 ORTHO05D000501 9.8e-09 65.1 192 26.0
Glyma.20G036200 Glycine max HOM05D000001 ORTHO05D000501 2.2e-08 63.9 197 27.4
Sc04g0008070 Simmondsia chinensis HOM05D000001 ORTHO05D000501 2.9e-08 63.5 182 25.8
Cc11_g12940 Coffea canephora HOM05D000001 ORTHO05D000501 6.4e-08 62.4 189 23.3
Cc11_g12970 Coffea canephora HOM05D000001 ORTHO05D000501 8.3e-08 62.0 160 25.0
MBI05_g34369_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 8.3e-08 62.0 191 27.2
MSTRG.702 Avicennia marina HOM05D000001 ORTHO05D000501 1.4e-07 61.2 190 24.7
PSO423G0042 Papaver somniferum HOM05D024892 ORTHO05D026022 1.8e-07 60.8 197 30.5
CiPaw.05G134500 Carya illinoinensis HOM05D000001 ORTHO05D000501 2.4e-07 60.5 163 25.8
MD13G1071500 Malus domestica HOM05D000001 ORTHO05D000501 4.1e-07 59.7 157 25.5
ATR0564G168 Amborella trichopoda HOM05D000001 ORTHO05D000501 7.0e-07 58.9 156 28.8
Eucgr.G02499 Eucalyptus grandis HOM05D000001 ORTHO05D000501 7.0e-07 58.9 156 25.0
Actinidia18087 Actinidia chinensis HOM05D000001 ORTHO05D000501 1.2e-06 58.2 198 29.8
AL1G26110 Arabidopsis lyrata HOM05D000001 ORTHO05D000501 1.2e-06 58.2 196 24.0
Cpa.g.sc128.33 Carica papaya HOM05D000001 ORTHO05D000501 1.2e-06 58.2 203 24.6
MELO3C012099.2 Cucumis melo HOM05D000001 ORTHO05D000501 1.2e-06 58.2 157 25.5
FAN17G2920 Fragaria x ananassa HOM05D000001 ORTHO05D000501 1.2e-06 58.2 157 25.5
Prupe.1G275400 Prunus persica HOM05D000001 ORTHO05D000501 1.2e-06 58.2 158 26.6
CANSAT64G2532 Cannabis sativa HOM05D000001 ORTHO05D000501 1.6e-06 57.8 157 24.2
Ca_27055_v3 Cicer arietinum L. HOM05D000001 ORTHO05D000501 1.6e-06 57.8 157 24.8
Gohir.A12G164700 Gossypium hirsutum HOM05D000001 ORTHO05D000501 1.6e-06 57.8 192 24.5
VMungo0720G1318 Vigna mungo HOM05D000001 ORTHO05D000501 1.6e-06 57.8 130 33.8
Cpa.g.sc128.34 Carica papaya HOM05D000001 ORTHO05D000501 2.0e-06 57.4 182 28.0
FvH4_4g31290 Fragaria vesca HOM05D000001 ORTHO05D000501 2.0e-06 57.4 157 24.8
FAN12G3485 Fragaria x ananassa HOM05D000001 ORTHO05D000501 2.0e-06 57.4 157 24.8
FAN22G0963 Fragaria x ananassa HOM05D000001 ORTHO05D000501 2.0e-06 57.4 157 24.8
Gohir.A06G174400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 2.0e-06 57.4 210 27.6
Thecc.10G164700 Theobroma cacao HOM05D000001 ORTHO05D000501 2.0e-06 57.4 186 26.9
Actinidia18086 Actinidia chinensis HOM05D000001 ORTHO05D000501 2.7e-06 57.0 194 29.9
Gohir.D12G167800 Gossypium hirsutum HOM05D000001 ORTHO05D000501 2.7e-06 57.0 192 24.5
Gorai.008G180700 Gossypium raimondii HOM05D000001 ORTHO05D000501 2.7e-06 57.0 192 24.5
Medtr5g041010 Medicago truncatula HOM05D000001 ORTHO05D000501 2.7e-06 57.0 157 24.2
QL03p068759 Quercus lobata HOM05D000001 ORTHO05D000501 2.7e-06 57.0 154 26.6
TPR.G39204 Trifolium pratense HOM05D000001 ORTHO05D000501 2.7e-06 57.0 157 24.2
Gohir.D06G184400 Gossypium hirsutum HOM05D000001 ORTHO05D000501 3.5e-06 56.6 203 26.1
MBI05_g36699_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000501 3.5e-06 56.6 191 26.7
Medtr1g048200 Medicago truncatula HOM05D000001 ORTHO05D021353 3.5e-06 56.6 178 24.2
RcHm_v2.0_Chr4g0439731 Rosa chinensis HOM05D000001 ORTHO05D000501 3.5e-06 56.6 171 26.3
BcaB03g13107 Brassica carinata HOM05D000001 ORTHO05D000501 4.6e-06 56.2 134 29.9
Gohir.D10G190300 Gossypium hirsutum HOM05D008337 ORTHO05D000501 5.9e-06 55.8 131 27.5
Gorai.011G213300 Gossypium raimondii HOM05D008337 ORTHO05D000501 5.9e-06 55.8 131 29.8
Psat2g119480 Pisum sativum HOM05D000001 ORTHO05D000501 5.9e-06 55.8 163 23.3


User provided reference genes

Program Settings