Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3190 Papaver somniferum HOM05D007375 ORTHO05D009293 7.6e-81 303.9 167 100.0
PSO339G5659 Papaver somniferum HOM05D007375 ORTHO05D009293 2.2e-80 302.4 167 99.4
TAR623G0701 Trochodendron aralioides HOM05D007375 ORTHO05D009293 9.0e-42 174.1 170 65.9
Gohir.A07G113900 Gossypium hirsutum HOM05D007375 ORTHO05D009293 1.7e-40 169.9 168 63.1
Actinidia22459 Actinidia chinensis HOM05D007375 ORTHO05D009293 2.9e-40 169.1 169 64.5
Manes.04G063400 Manihot esculenta HOM05D007375 ORTHO05D009293 2.9e-40 169.1 168 63.7
Gohir.D07G117600 Gossypium hirsutum HOM05D007375 ORTHO05D009293 6.5e-40 167.9 168 62.5
Gorai.001G126500 Gossypium raimondii HOM05D007375 ORTHO05D009293 6.5e-40 167.9 168 62.5
Thecc.09G269700 Theobroma cacao HOM05D007375 ORTHO05D009293 1.1e-39 167.2 146 65.8
Duzib168G1424 Durio zibethinus HOM05D007375 ORTHO05D009293 1.4e-39 166.8 168 61.9
MD11G1177000 Malus domestica HOM05D007375 ORTHO05D009293 1.8e-37 159.8 171 62.6
Nn6g33246 Nelumbo nucifera HOM05D007375 ORTHO05D009293 1.8e-37 159.8 173 63.0
MD03G1161000 Malus domestica HOM05D007375 ORTHO05D009293 2.3e-37 159.5 169 61.5
Hma1.2p1_1811F.1_g303540 Hydrangea macrophylla HOM05D007375 ORTHO05D009293 3.0e-37 159.1 104 76.9
vmacro14306 Vaccinium macrocarpon HOM05D007375 ORTHO05D009293 8.8e-37 157.5 150 60.7
CiPaw.13G125500 Carya illinoinensis HOM05D007375 ORTHO05D009293 1.9e-36 156.4 167 59.3
GSVIVG01037526001 Vitis vinifera HOM05D007375 ORTHO05D009293 4.3e-36 155.2 110 74.5
Duzib170G0509 Durio zibethinus HOM05D007375 ORTHO05D009293 5.7e-36 154.8 168 60.7
Atru.chr3.3047 Acer truncatum HOM05D007375 ORTHO05D009293 1.7e-35 153.3 98 78.6
Atru.chr3.3056 Acer truncatum HOM05D007375 ORTHO05D009293 1.7e-35 153.3 98 78.6
Lsat_1_v5_gn_6_49101 Lactuca sativa HOM05D007375 ORTHO05D009293 2.8e-35 152.5 168 58.9
HanXRQChr13g0404191 Helianthus annuus HOM05D007375 ORTHO05D009293 4.8e-35 151.8 137 61.3
Lj2E833T0 Lonicera japonica HOM05D007375 ORTHO05D009293 1.4e-34 150.2 171 57.9
CSS0023504 Camellia sinensis var. sinensis HOM05D007375 ORTHO05D009293 1.8e-34 149.8 171 56.7
Rhsim01G0198300 Rhododendron simsii HOM05D007375 ORTHO05D009293 1.8e-34 149.8 155 58.7
EL10Ac7g16260 Beta vulgaris HOM05D007375 ORTHO05D009293 3.1e-34 149.1 117 67.5
CDE07G1152 Ceratophyllum demersum HOM05D007375 ORTHO05D009293 3.1e-34 149.1 114 72.8
CAN.G742.2 Capsicum annuum HOM05D007375 ORTHO05D009293 4.1e-34 148.7 171 62.6
Cc01_g08020 Coffea canephora HOM05D007375 ORTHO05D009293 5.3e-34 148.3 98 82.7
FAN21G2595 Fragaria x ananassa HOM05D007375 ORTHO05D009293 5.3e-34 148.3 105 79.0
RcHm_v2.0_Chr5g0049271 Rosa chinensis HOM05D007375 ORTHO05D009293 6.9e-34 147.9 175 57.1
FvH4_3g26920 Fragaria vesca HOM05D007375 ORTHO05D009293 1.5e-33 146.7 105 77.1
CsaV3_1G004520 Cucumis sativus L. HOM05D007375 ORTHO05D009293 2.0e-33 146.4 97 80.4
MELO3C017379.2 Cucumis melo HOM05D007375 ORTHO05D009293 2.6e-33 146.0 97 80.4
Migut.N02430 Erythranthe guttata HOM05D007375 ORTHO05D009293 2.6e-33 146.0 125 69.6
Sopen11g029380 Solanum pennellii HOM05D007375 ORTHO05D009293 3.4e-33 145.6 168 58.9
Cfa010224 Carpinus fangiana HOM05D007375 ORTHO05D009293 7.7e-33 144.4 86 74.4
ClCG06G014160 Citrullus lanatus HOM05D007375 ORTHO05D009293 7.7e-33 144.4 97 79.4
Solyc11g071710.2 Solanum lycopersicum HOM05D007375 ORTHO05D009293 7.7e-33 144.4 168 60.1
CANSAT54G0888 Cannabis sativa HOM05D007375 ORTHO05D009293 1.0e-32 144.1 171 57.9
ECA233G1923 Erigeron canadensis HOM05D000870 ORTHO05D000715 1.7e-32 143.3 106 70.8
Peaxi162Scf00259g00119 Petunia axillaris HOM05D007375 ORTHO05D009293 5.0e-32 141.7 159 60.4
Potri.009G155700 Populus trichocarpa HOM05D007375 ORTHO05D009293 5.0e-32 141.7 180 51.1
Sabra09G0122000 Salix brachista HOM05D007375 ORTHO05D009293 5.0e-32 141.7 180 51.1
PGSC0003DMG401003010 Solanum tuberosum HOM05D007375 ORTHO05D009293 8.5e-32 141.0 171 57.9
Nitab4.5_0002498g0050 Nicotiana tabacum HOM05D007375 ORTHO05D009293 1.4e-31 140.2 178 58.4
ATR0697G291 Amborella trichopoda HOM05D007375 ORTHO05D009293 2.5e-31 139.4 130 60.0
FAN11G1199 Fragaria x ananassa HOM05D007375 ORTHO05D009293 3.2e-31 139.0 86 74.4
QL01p018876 Quercus lobata HOM05D007375 ORTHO05D009293 4.2e-31 138.7 99 79.8
Sed0019994 Sechium edule HOM05D007375 ORTHO05D009293 5.5e-31 138.3 97 74.2
Sc21g0006670 Simmondsia chinensis HOM05D007375 ORTHO05D009293 7.2e-31 137.9 175 48.6
Nitab4.5_0007815g0030 Nicotiana tabacum HOM05D007375 ORTHO05D009293 9.4e-31 137.5 171 57.3
MSTRG.18802 Avicennia marina HOM05D007375 ORTHO05D009293 1.0e-29 134.0 166 54.2
FAN16G0622 Fragaria x ananassa HOM05D007375 ORTHO05D009293 1.8e-29 133.3 156 54.5
FAN25G3479 Fragaria x ananassa HOM05D000507 ORTHO05D000416 2.3e-29 132.9 150 52.7
Phvul.008G210600 Phaseolus vulgaris HOM05D007375 ORTHO05D009293 2.3e-29 132.9 173 56.1
Psat2g023920 Pisum sativum HOM05D007375 ORTHO05D009293 1.1e-28 130.6 171 56.7
CARHR152710 Cardamine hirsuta HOM05D007375 ORTHO05D009293 1.5e-28 130.2 130 61.5
Lalb_Chr10g0105741 Lupinus albus HOM05D007375 ORTHO05D009293 1.5e-28 130.2 109 69.7
AUR62020198 Chenopodium quinoa HOM05D007375 ORTHO05D009293 2.6e-28 129.4 84 78.6
Ciclev10029424m.g Citrus clementina HOM05D007375 ORTHO05D009293 3.3e-28 129.0 136 54.4
LjContig00564g0003226 Lotus japonicus HOM05D007375 ORTHO05D009293 4.4e-28 128.6 178 54.5
Medtr5g086670 Medicago truncatula HOM05D007375 ORTHO05D009293 1.3e-27 127.1 172 54.7
Glyma.02G271400 Glycine max HOM05D007375 ORTHO05D009293 3.7e-27 125.6 171 55.6
AT3G44020 Arabidopsis thaliana HOM05D007375 ORTHO05D009293 1.4e-26 123.6 103 69.9
BcaC01g02084 Brassica carinata HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 70.3
A06p22290 Brassica napus HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 70.3
C03p68750 Brassica napus HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 70.3
BolC3t19129H Brassica oleracea HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 70.3
BraA06t25313Z Brassica rapa HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 70.3
Sp5g17280 Schrenkiella parvula HOM05D007375 ORTHO05D009293 1.8e-26 123.2 101 68.3
Thhalv10021645m.g Eutrema salsugineum HOM05D007375 ORTHO05D009293 2.4e-26 122.9 102 66.7
VMungo0647G0066 Vigna mungo HOM05D007375 ORTHO05D009293 2.4e-26 122.9 171 53.2
Os01g0930000 Oryza sativa ssp. japonica HOM05D007375 ORTHO05D009293 3.1e-26 122.5 85 65.9
BcaB01g01208 Brassica carinata HOM05D007375 ORTHO05D009293 5.3e-26 121.7 101 69.3
Hund18815 Selenicereus undatus HOM05D007375 ORTHO05D009293 6.9e-26 121.3 239 36.4
HPP92_000979 Vanilla planifolia HOM05D007375 ORTHO05D009293 6.9e-26 121.3 88 73.9
AL5G22060 Arabidopsis lyrata HOM05D007375 ORTHO05D009293 9.1e-26 120.9 158 52.5
Aa31LG2G17160 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.0e-25 119.8 169 51.5
SEGI_05685 Sequoiadendron giganteum HOM05D007375 ORTHO05D009293 2.6e-25 119.4 151 47.7
arahy.Tifrunner.gnm1.ann1.MUTN5S Arachis hypogaea HOM05D007375 ORTHO05D009293 5.9e-25 118.2 171 53.8
Zm00001eb370040 Zea mays HOM05D007375 ORTHO05D009293 1.0e-24 117.5 86 64.0
arahy.Tifrunner.gnm1.ann1.R1KXAM Arachis hypogaea HOM05D007375 ORTHO05D009293 5.0e-24 115.2 171 51.5
Mapoly0036s0048 Marchantia polymorpha HOM05D007375 ORTHO05D009293 1.1e-23 114.0 95 72.6
Carub.0005s0977 Capsella rubella HOM05D007375 ORTHO05D009293 1.4e-23 113.6 164 51.2
AagrBONN_evm.TU.Sc2ySwM_362.1659 Anthoceros agrestis HOM05D007375 ORTHO05D009293 6.7e-21 104.8 84 60.7
Actinidia06350 Actinidia chinensis HOM05D007375 ORTHO05D009293 8.8e-21 104.4 57 84.2
Pp3c7_23060 Physcomitrium patens HOM05D007375 ORTHO05D009293 4.4e-20 102.1 92 69.6
Pp3c11_5080 Physcomitrium patens HOM05D007375 ORTHO05D009293 5.7e-20 101.7 92 69.6
SGA_v2.0_scaffold7G04014 Striga asiatica HOM05D007375 ORTHO05D009293 4.1e-18 95.5 135 48.9
unitig_22.g6168 Utricularia gibba HOM05D007375 ORTHO05D009293 9.1e-18 94.4 109 60.6
Haze_23611 Corylus avellana HOM05D007375 ORTHO05D009293 1.3e-16 90.5 126 46.0
Eucgr.J00596 Eucalyptus grandis HOM05D007375 ORTHO05D009293 9.4e-15 84.3 40 82.5
Oeu048815.1 Olea europaea HOM05D007375 ORTHO05D009293 2.3e-13 79.7 63 68.3
Prupe.6G149200 Prunus persica HOM05D007375 ORTHO05D009293 6.7e-13 78.2 110 50.0
Glyma.14G019800 Glycine max HOM05D007375 ORTHO05D009293 3.3e-12 75.9 75 53.3
Aa31LG4G13610 Aethionema arabicum HOM05D007375 ORTHO05D009293 2.0e-09 66.6 131 40.5
PGR119G2080 Punica granatum HOM05D007375 ORTHO05D009293 2.2e-08 63.2 41 75.6
Dinv18872 Davidia involucrata HOM05D007375 ORTHO05D009293 2.9e-08 62.8 36 77.8
COL.COLO4_25390 Corchorus olitorius HOM05D007375 ORTHO05D009293 4.2e-07 58.9 29 79.3
DCAR_012259 Daucus carota HOM05D007375 ORTHO05D009293 1.6e-06 57.0 106 42.5


User provided reference genes

Program Settings