Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3168 Papaver somniferum HOM05D006595 ORTHO05D008238 1.2e-90 336.7 193 100.0
PSO339G5391 Papaver somniferum HOM05D006595 ORTHO05D008238 8.7e-89 330.5 193 97.4
Prupe.6G012000 Prunus persica HOM05D006595 ORTHO05D008238 3.8e-44 182.2 187 63.6
MD03G1011600 Malus domestica HOM05D006595 ORTHO05D008238 1.5e-43 180.3 186 64.0
Dinv13419 Davidia involucrata HOM05D006595 ORTHO05D008238 5.5e-43 178.3 190 61.1
TAR636G1600 Trochodendron aralioides HOM05D006595 ORTHO05D008238 5.5e-43 178.3 194 63.9
Atru.chr3.2190 Acer truncatum HOM05D006595 ORTHO05D008238 1.6e-42 176.8 188 62.8
Ciclev10016858m.g Citrus clementina HOM05D006595 ORTHO05D008238 2.7e-42 176.0 174 64.9
Aqoxy2G00094 Aquilegia oxysepala HOM05D006595 ORTHO05D008238 6.8e-41 171.4 180 60.0
Manes.03G089200 Manihot esculenta HOM05D006595 ORTHO05D008238 2.6e-40 169.5 187 60.4
QL01p010272 Quercus lobata HOM05D006595 ORTHO05D008238 9.8e-40 167.5 161 64.6
Potri.001G009800 Populus trichocarpa HOM05D006595 ORTHO05D008238 1.3e-39 167.2 195 57.4
RcHm_v2.0_Chr5g0081351 Rosa chinensis HOM05D006595 ORTHO05D008238 1.7e-39 166.8 186 61.8
Nn7g35969 Nelumbo nucifera HOM05D006595 ORTHO05D008238 4.1e-38 162.2 194 58.2
FAN21G3045 Fragaria x ananassa HOM05D000750 ORTHO05D000714 5.4e-38 161.8 163 64.4
FAN25G3451 Fragaria x ananassa HOM05D000750 ORTHO05D000714 9.1e-38 161.0 186 59.7
FvH4_3g44681 Fragaria vesca HOM05D006595 ORTHO05D008238 1.2e-37 160.6 186 59.1
Sopen01g002130 Solanum pennellii HOM05D006595 ORTHO05D008238 1.2e-37 160.6 192 56.8
PGSC0003DMG401032143 Solanum tuberosum HOM05D006595 ORTHO05D008238 1.2e-37 160.6 192 57.8
Sabra01G0007800 Salix brachista HOM05D006595 ORTHO05D008238 4.5e-37 158.7 214 52.3
AUR62019207 Chenopodium quinoa HOM05D006595 ORTHO05D008238 1.3e-36 157.1 191 59.7
FAN17G0104 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.3e-36 157.1 188 58.0
EL10Ac4g10339 Beta vulgaris HOM05D006595 ORTHO05D008238 1.7e-36 156.8 186 60.8
CiPaw.13G171400 Carya illinoinensis HOM05D006595 ORTHO05D008238 2.3e-36 156.4 187 57.8
Solyc01g006130.4 Solanum lycopersicum HOM05D006595 ORTHO05D008238 3.8e-36 155.6 188 56.4
FAN16G1668 Fragaria x ananassa HOM05D000750 ORTHO05D000714 5.0e-36 155.2 163 62.6
Peaxi162Scf00441g00213 Petunia axillaris HOM05D006595 ORTHO05D008238 5.0e-36 155.2 188 58.0
Dinv34743 Davidia involucrata HOM05D006595 ORTHO05D008238 6.6e-36 154.8 133 71.4
Migut.F01376 Erythranthe guttata HOM05D006595 ORTHO05D008238 1.9e-35 153.3 189 56.1
Duzib168G0997 Durio zibethinus HOM05D006595 ORTHO05D008238 2.5e-35 152.9 188 58.5
AUR62000037 Chenopodium quinoa HOM05D006595 ORTHO05D008238 3.3e-35 152.5 194 58.2
Rhsim13G0228400 Rhododendron simsii HOM05D000750 ORTHO05D000714 3.3e-35 152.5 161 63.4
GSVIVG01025384001 Vitis vinifera HOM05D006595 ORTHO05D008238 3.3e-35 152.5 194 55.2
CAN.G140.24 Capsicum annuum HOM05D006595 ORTHO05D008238 4.2e-35 152.1 189 57.7
TWI34G0416 Tripterygium wilfordii HOM05D006595 ORTHO05D008238 4.2e-35 152.1 191 57.1
Lj5g0010961 Lotus japonicus HOM05D006595 ORTHO05D008238 5.5e-35 151.8 147 64.6
Sed0019652 Sechium edule HOM05D006595 ORTHO05D008238 7.2e-35 151.4 178 56.7
Phvul.007G006200 Phaseolus vulgaris HOM05D006595 ORTHO05D008238 1.2e-34 150.6 145 64.1
Gohir.D11G216800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 1.6e-34 150.2 188 56.9
CSS0011176 Camellia sinensis var. sinensis HOM05D006595 ORTHO05D008238 2.1e-34 149.8 174 60.3
Gorai.004G093500 Gossypium raimondii HOM05D006595 ORTHO05D008238 2.8e-34 149.4 188 56.4
Gohir.A11G206900 Gossypium hirsutum HOM05D006595 ORTHO05D008238 4.7e-34 148.7 188 56.4
SGA_v2.0_scaffold78G25462 Striga asiatica HOM05D006595 ORTHO05D008238 6.1e-34 148.3 192 53.6
Gohir.A08G079300 Gossypium hirsutum HOM05D006595 ORTHO05D008238 8.0e-34 147.9 188 55.9
SalBow6G7140 Salvia bowleyana HOM05D006595 ORTHO05D008238 8.0e-34 147.9 192 55.7
CANSAT11G0726 Cannabis sativa HOM05D006595 ORTHO05D008238 1.0e-33 147.5 182 56.0
CsaV3_4G023550 Cucumis sativus L. HOM05D006595 ORTHO05D008238 1.0e-33 147.5 187 55.1
Cfa009626 Carpinus fangiana HOM05D006595 ORTHO05D008238 1.8e-33 146.7 187 56.1
Sp4g17140 Schrenkiella parvula HOM05D006595 ORTHO05D008238 3.0e-33 146.0 195 56.9
Haze_22995 Corylus avellana HOM05D006595 ORTHO05D008238 4.0e-33 145.6 187 55.6
Gohir.D08G088800 Gossypium hirsutum HOM05D006595 ORTHO05D008238 4.0e-33 145.6 188 55.3
Gorai.007G232900 Gossypium raimondii HOM05D006595 ORTHO05D008238 5.2e-33 145.2 189 54.0
Lj2A706G26 Lonicera japonica HOM05D006595 ORTHO05D008238 6.8e-33 144.8 164 62.8
PGR102G3301 Punica granatum HOM05D006595 ORTHO05D008238 6.8e-33 144.8 191 55.5
CARHR129020 Cardamine hirsuta HOM05D006595 ORTHO05D008238 1.2e-32 144.1 192 54.7
AT2G34860 Arabidopsis thaliana HOM05D006595 ORTHO05D008238 5.7e-32 141.7 182 57.1
Cc01_g00990 Coffea canephora HOM05D006595 ORTHO05D008238 5.7e-32 141.7 194 54.6
THA.LOC104815114 Tarenaya hassleriana HOM05D006595 ORTHO05D008238 5.7e-32 141.7 131 68.7
Carub.0004s1654 Capsella rubella HOM05D006595 ORTHO05D008238 1.7e-31 140.2 195 55.9
CDE04G0274 Ceratophyllum demersum HOM05D006595 ORTHO05D008238 2.2e-31 139.8 193 56.0
ClCG02G023820 Citrullus lanatus HOM05D006595 ORTHO05D008238 2.2e-31 139.8 187 54.5
MELO3C014661.2 Cucumis melo HOM05D006595 ORTHO05D008238 2.8e-31 139.4 184 54.9
Eucgr.B03632 Eucalyptus grandis HOM05D006595 ORTHO05D008238 2.8e-31 139.4 170 57.6
MSTRG.208 Avicennia marina HOM05D006595 ORTHO05D008238 1.1e-30 137.5 189 52.9
Thhalv10017283m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 1.1e-30 137.5 195 54.4
MSTRG.8324 Avicennia marina HOM05D006595 ORTHO05D008238 1.8e-30 136.7 194 53.1
Nitab4.5_0001620g0030 Nicotiana tabacum HOM05D006595 ORTHO05D008238 2.4e-30 136.3 193 44.6
ECA248G3199 Erigeron canadensis HOM05D006595 ORTHO05D008238 3.2e-30 136.0 165 60.0
Oeu038858.2 Olea europaea HOM05D006595 ORTHO05D008238 3.2e-30 136.0 192 55.2
Ah.04g161600 Amaranthus hybridus HOM05D000750 ORTHO05D000714 7.0e-30 134.8 152 63.2
COL.COLO4_10447 Corchorus olitorius HOM05D006595 ORTHO05D008238 7.0e-30 134.8 196 41.8
Os08g0463900 Oryza sativa ssp. japonica HOM05D006595 ORTHO05D008238 7.0e-30 134.8 133 65.4
BcaB06g28828 Brassica carinata HOM05D006595 ORTHO05D008238 1.6e-29 133.7 184 54.9
Aa31sc409G10 Aethionema arabicum HOM05D006595 ORTHO05D008238 2.0e-29 133.3 190 53.2
Glyma.10G293900 Glycine max HOM05D006595 ORTHO05D008238 2.0e-29 133.3 162 55.6
A05p10810 Brassica napus HOM05D006595 ORTHO05D008238 2.7e-29 132.9 164 57.3
BraA04t18167Z Brassica rapa HOM05D006595 ORTHO05D008238 3.5e-29 132.5 191 53.9
BraA05t20025Z Brassica rapa HOM05D006595 ORTHO05D008238 3.5e-29 132.5 163 55.2
Medtr1g116170 Medicago truncatula HOM05D006595 ORTHO05D008238 3.5e-29 132.5 125 72.0
Glyma.20G243800 Glycine max HOM05D006595 ORTHO05D008238 1.0e-28 131.0 103 77.7
TPR.G10430 Trifolium pratense HOM05D006595 ORTHO05D008238 1.0e-28 131.0 126 68.3
HPP92_026734 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.0e-28 131.0 195 52.3
BcaC02g07751 Brassica carinata HOM05D006595 ORTHO05D008238 1.3e-28 130.6 191 53.4
BolC4t27880H Brassica oleracea HOM05D006595 ORTHO05D008238 1.3e-28 130.6 191 53.4
HPP92_016182 Vanilla planifolia HOM05D006595 ORTHO05D008238 1.3e-28 130.6 162 59.3
C04p64040 Brassica napus HOM05D006595 ORTHO05D008238 1.7e-28 130.2 191 53.4
Lj2A705G49 Lonicera japonica HOM05D006595 ORTHO05D008238 2.3e-28 129.8 135 54.8
A04p26620 Brassica napus HOM05D006595 ORTHO05D008238 2.9e-28 129.4 191 53.4
Ca_11377_v3 Cicer arietinum L. HOM05D001261 ORTHO05D001130 3.9e-28 129.0 131 67.9
Nitab4.5_0005477g0080 Nicotiana tabacum HOM05D006595 ORTHO05D008238 5.0e-28 128.6 193 44.0
arahy.Tifrunner.gnm1.ann1.ZL64GD Arachis hypogaea HOM05D006595 ORTHO05D008238 6.6e-28 128.3 141 61.7
Lalb_Chr02g0143771 Lupinus albus HOM05D006595 ORTHO05D008238 8.6e-28 127.9 188 52.7
BcaC02g11570 Brassica carinata HOM05D006595 ORTHO05D008238 1.1e-27 127.5 189 52.4
C04p13910 Brassica napus HOM05D006595 ORTHO05D008238 1.1e-27 127.5 188 51.1
BolC4t22980H Brassica oleracea HOM05D006595 ORTHO05D008238 1.1e-27 127.5 188 51.1
Thecc.09G215500 Theobroma cacao HOM05D006595 ORTHO05D008238 2.5e-27 126.3 139 51.8
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.3e-27 125.9 145 62.1
Cpa.g.sc119.91 Carica papaya HOM05D006595 ORTHO05D008238 5.6e-27 125.2 196 51.0
Psat6g238960 Pisum sativum HOM05D006595 ORTHO05D008238 5.6e-27 125.2 187 55.1
Sc16g0012000 Simmondsia chinensis HOM05D006595 ORTHO05D008238 2.8e-26 122.9 164 56.1
SEGI_11759 Sequoiadendron giganteum HOM05D006595 ORTHO05D008238 3.6e-26 122.5 156 57.7
ATR1149G131 Amborella trichopoda HOM05D006595 ORTHO05D008238 6.1e-26 121.7 89 84.3
Hund06674 Selenicereus undatus HOM05D006595 ORTHO05D008238 1.2e-24 117.5 138 63.0
Mapoly0120s0023 Marchantia polymorpha HOM05D006595 ORTHO05D008238 1.5e-24 117.1 138 58.0
Lsat_1_v5_gn_1_68280 Lactuca sativa HOM05D006595 ORTHO05D008238 4.4e-24 115.5 150 45.3
arahy.Tifrunner.gnm1.ann1.SSSL8J Arachis hypogaea HOM05D006595 ORTHO05D008238 5.8e-24 115.2 133 60.2
HanXRQChr11g0344931 Helianthus annuus HOM05D006595 ORTHO05D008238 3.7e-23 112.5 146 49.3
unitig_747.g21415 Utricularia gibba HOM05D006595 ORTHO05D008238 4.9e-23 112.1 155 55.5
Pp3c3_12490 Physcomitrium patens HOM05D006595 ORTHO05D008238 3.2e-22 109.4 138 56.5
SMO331G0037 Selaginella moellendorffii HOM05D006595 ORTHO05D008238 7.0e-22 108.2 111 65.8
QL01p010258 Quercus lobata HOM05D006595 ORTHO05D008238 9.2e-22 107.8 118 46.6
QL08p062509 Quercus lobata HOM05D006595 ORTHO05D008238 9.2e-22 107.8 118 46.6
VMungo0720G3035 Vigna mungo HOM05D006595 ORTHO05D008238 9.2e-22 107.8 111 48.6
AL4G30870 Arabidopsis lyrata HOM05D006595 ORTHO05D008238 5.0e-20 102.1 186 39.2
MD11G1014500 Malus domestica HOM05D006595 ORTHO05D008238 1.1e-19 100.9 76 63.2
CBR_g22940 Chara braunii HOM05D006595 ORTHO05D008238 1.9e-19 100.1 154 51.3
FAN11G2269 Fragaria x ananassa HOM05D000750 ORTHO05D000714 4.3e-19 99.0 76 63.2
vmacro04249 Vaccinium macrocarpon HOM05D006595 ORTHO05D008238 4.3e-19 99.0 303 30.7
FAN16G0514 Fragaria x ananassa HOM05D000005 ORTHO05D000012 9.5e-19 97.8 104 50.0
FvH4_3g44571 Fragaria vesca HOM05D006595 ORTHO05D008238 8.1e-18 94.7 74 60.8
PRCOL_00006415 Prasinoderma coloniale HOM05D006595 ORTHO05D008238 4.0e-17 92.4 118 61.9
MCO03G122 Micromonas commoda HOM05D006595 ORTHO05D008238 1.5e-16 90.5 109 61.5
Cre11.g475850 Chlamydomonas reinhardtii HOM05D006595 ORTHO05D008238 2.2e-15 86.7 131 42.7
BcaC07g42181 Brassica carinata HOM05D006595 ORTHO05D008238 4.3e-11 72.4 161 34.2
Thhalv10012349m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 2.8e-10 69.7 61 57.4
BcaB01g02723 Brassica carinata HOM05D006595 ORTHO05D008238 1.1e-09 67.8 149 33.6
BcaB06g29011 Brassica carinata HOM05D006595 ORTHO05D008238 4.0e-09 65.9 57 57.9
BcaB01g03109 Brassica carinata HOM05D006595 ORTHO05D008238 1.5e-08 63.9 85 43.5
Pp3c4_29200 Physcomitrium patens HOM05D006595 ORTHO05D008238 8.4e-07 58.2 111 35.1


User provided reference genes

Program Settings