Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3135 Papaver somniferum HOM05D024353 ORTHO05D304316 3.3e-86 321.6 155 100.0
PSO675G2390 Papaver somniferum HOM05D024353 ORTHO05D304864 4.6e-48 194.9 155 60.0
PSO170G3488 Papaver somniferum HOM05D024353 ORTHO05D007080 2.9e-42 175.6 155 52.3
PSO407G0395 Papaver somniferum HOM05D024353 ORTHO05D305441 4.9e-26 121.7 114 46.5
PSO170G0541 Papaver somniferum HOM05D024353 ORTHO05D305024 1.6e-21 106.7 59 86.4
PSO384G2543 Papaver somniferum HOM05D000009 ORTHO05D000008 5.0e-18 95.1 87 59.8
PSO832G4203 Papaver somniferum HOM05D003692 ORTHO05D004295 1.3e-13 80.5 101 43.6
PSO761G0472 Papaver somniferum HOM05D005702 ORTHO05D007080 1.5e-11 73.6 140 32.9
PSO339G5775 Papaver somniferum HOM05D023780 ORTHO05D302189 6.5e-10 68.2 116 35.3
Haze_26338 Corylus avellana HOM05D005702 ORTHO05D007080 8.5e-10 67.8 160 28.8
ATR0332G108 Amborella trichopoda HOM05D005702 ORTHO05D007080 5.5e-09 65.1 146 28.8
Os03g0699400 Oryza sativa ssp. japonica HOM05D005702 ORTHO05D007080 2.1e-08 63.2 146 28.1
BcaC05g24554 Brassica carinata HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
BcaC05g24631 Brassica carinata HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
A10p01770 Brassica napus HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
C05p01750 Brassica napus HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
BraA10t42452Z Brassica rapa HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
TPR.G4786 Trifolium pratense HOM05D005702 ORTHO05D007080 2.7e-08 62.8 146 27.4
Atru.chr5.1455 Acer truncatum HOM05D005702 ORTHO05D007080 3.6e-08 62.4 146 27.4
Psat3g003080 Pisum sativum HOM05D005702 ORTHO05D007080 3.6e-08 62.4 146 27.4
HPP92_023571 Vanilla planifolia HOM05D005702 ORTHO05D007080 3.6e-08 62.4 146 27.4
A08p37460 Brassica napus HOM05D005702 ORTHO05D007080 4.6e-08 62.0 146 26.7
BraA08t35644Z Brassica rapa HOM05D005702 ORTHO05D007080 4.6e-08 62.0 146 26.7
AL1G12620 Arabidopsis lyrata HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
AT1G03150 Arabidopsis thaliana HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
Carub.0001s0229 Capsella rubella HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
CARHR002490 Cardamine hirsuta HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
Cpa.g.sc52.44 Carica papaya HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 27.4
Ciclev10022184m.g Citrus clementina HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 27.4
Thhalv10008907m.g Eutrema salsugineum HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
Sp1g02180 Schrenkiella parvula HOM05D005702 ORTHO05D007080 6.1e-08 61.6 146 26.7
Phvul.001G152200 Phaseolus vulgaris HOM05D005702 ORTHO05D007080 7.9e-08 61.2 146 27.4
SEGI_22390 Sequoiadendron giganteum HOM05D005702 ORTHO05D007080 7.9e-08 61.2 146 27.4
Zm00001eb054010 Zea mays HOM05D005702 ORTHO05D007080 7.9e-08 61.2 146 27.4
CSS0013604 Camellia sinensis var. sinensis HOM05D005702 ORTHO05D007080 1.0e-07 60.8 146 27.4
CiPaw.08G105700 Carya illinoinensis HOM05D005702 ORTHO05D007080 1.0e-07 60.8 146 27.4
Dinv34763 Davidia involucrata HOM05D005702 ORTHO05D007080 1.0e-07 60.8 146 27.4
Duzib211G0381 Durio zibethinus HOM05D005702 ORTHO05D007080 1.0e-07 60.8 146 27.4
Glyma.03G154800 Glycine max HOM05D005702 ORTHO05D007080 1.0e-07 60.8 146 27.4
PSO339G5655 Papaver somniferum HOM05D023780 ORTHO05D303492 1.0e-07 60.8 131 31.3
FvH4_2g23390 Fragaria vesca HOM05D005702 ORTHO05D007080 1.4e-07 60.5 146 27.4
FAN15G2915 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.4e-07 60.5 146 27.4
FAN24G0191 Fragaria x ananassa HOM05D005702 ORTHO05D007080 1.4e-07 60.5 146 27.4
RcHm_v2.0_Chr6g0290851 Rosa chinensis HOM05D005702 ORTHO05D007080 1.4e-07 60.5 146 27.4
arahy.Tifrunner.gnm1.ann1.DZ64CF Arachis hypogaea HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.7
arahy.Tifrunner.gnm1.ann1.TC3YPE Arachis hypogaea HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.7
Cc01_g19390 Coffea canephora HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.7
Gorai.004G216300 Gossypium raimondii HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.7
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.0
SGA_v2.0_scaffold81G26013 Striga asiatica HOM05D005702 ORTHO05D007080 1.8e-07 60.1 146 26.7
AUR62029075 Chenopodium quinoa HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
FAN27G1453 Fragaria x ananassa HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 27.4
Gohir.D08G075100 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
Gohir.D08G204300 Gossypium hirsutum HOM05D005702 ORTHO05D007080 2.3e-07 59.7 145 26.2
Gorai.004G079400 Gossypium raimondii HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
Oeu047872.1 Olea europaea HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
THA.LOC104815941 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
GSVIVG01001156001 Vitis vinifera HOM05D005702 ORTHO05D007080 2.3e-07 59.7 146 26.7
Atru.chr5.1454 Acer truncatum HOM05D005702 ORTHO05D007080 3.0e-07 59.3 146 26.7
Nn4g26287 Nelumbo nucifera HOM05D005702 ORTHO05D007080 3.0e-07 59.3 146 26.7
Potri.005G210400 Populus trichocarpa HOM05D005702 ORTHO05D007080 3.0e-07 59.3 146 26.0
Gohir.A08G066400 Gossypium hirsutum HOM05D005702 ORTHO05D007080 3.9e-07 58.9 146 26.7
PSO135G0401 Papaver somniferum HOM05D023780 ORTHO05D304497 3.9e-07 58.9 134 32.1
Hund26623 Selenicereus undatus HOM05D005702 ORTHO05D007080 3.9e-07 58.9 146 26.7
Migut.N02047 Erythranthe guttata HOM05D005702 ORTHO05D007080 5.1e-07 58.5 146 26.7
CsaV3_7G028070 Cucumis sativus L. HOM05D005702 ORTHO05D007080 6.7e-07 58.2 146 26.0
HanXRQChr04g0118891 Helianthus annuus HOM05D005702 ORTHO05D007080 6.7e-07 58.2 146 26.0
Hma1.2p1_0822F.1_g224450 Hydrangea macrophylla HOM05D005702 ORTHO05D007080 6.7e-07 58.2 146 26.0
CANSAT25G3124 Cannabis sativa HOM05D005702 ORTHO05D007080 8.8e-07 57.8 146 26.0
ECA236G5031 Erigeron canadensis HOM05D005702 ORTHO05D007080 8.8e-07 57.8 146 26.0
Lsat_1_v5_gn_8_56441 Lactuca sativa HOM05D005702 ORTHO05D007080 8.8e-07 57.8 146 26.0
Lj1A47G37 Lonicera japonica HOM05D005702 ORTHO05D007080 1.1e-06 57.4 146 26.0
TWI59G0659 Tripterygium wilfordii HOM05D005702 ORTHO05D007080 1.1e-06 57.4 146 26.0
MSTRG.17448 Avicennia marina HOM05D005702 ORTHO05D007080 1.5e-06 57.0 146 26.0
CDE02G2156 Ceratophyllum demersum HOM05D005702 ORTHO05D007080 1.5e-06 57.0 141 24.8
DCAR_012484 Daucus carota HOM05D005702 ORTHO05D007080 2.0e-06 56.6 146 26.0
SalBow6G1090 Salvia bowleyana HOM05D005702 ORTHO05D007080 2.0e-06 56.6 146 25.3
Aa31LG1G9380 Aethionema arabicum HOM05D005702 ORTHO05D007080 2.5e-06 56.2 148 25.7
Manes.01G207200 Manihot esculenta HOM05D005702 ORTHO05D007080 2.5e-06 56.2 146 25.3
Dinv32924 Davidia involucrata HOM05D005702 ORTHO05D007080 4.3e-06 55.5 145 25.5


User provided reference genes

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