Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3057 Papaver somniferum HOM05D003715 ORTHO05D003958 9.8e-92 340.1 172 100.0
PSO782G0808 Papaver somniferum HOM05D003715 ORTHO05D003958 5.4e-66 254.6 132 97.0
PSO781G0019 Papaver somniferum HOM05D003715 ORTHO05D003958 1.9e-55 219.5 141 81.6
PSO384G3755 Papaver somniferum HOM05D003715 ORTHO05D003958 6.4e-43 177.9 142 71.8
PSO339G5928 Papaver somniferum HOM05D003715 ORTHO05D003958 1.6e-41 173.3 142 71.8
TAR623G0055 Trochodendron aralioides HOM05D003715 ORTHO05D003958 2.2e-30 136.3 147 53.1
Nn7g35866 Nelumbo nucifera HOM05D003715 ORTHO05D003958 3.8e-27 125.6 151 49.0
TAR369G0375 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.9e-26 123.2 141 53.9
Potri.013G057200 Populus trichocarpa HOM05D003715 ORTHO05D003958 2.3e-24 116.3 147 46.3
Potri.019G035600 Populus trichocarpa HOM05D003715 ORTHO05D003958 5.1e-24 115.2 144 43.1
MBI01_g25640_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 8.7e-24 114.4 144 48.6
Haze_19430 Corylus avellana HOM05D003715 ORTHO05D003958 1.1e-23 114.0 144 48.6
Sabra13G0051000 Salix brachista HOM05D003715 ORTHO05D003958 1.1e-23 114.0 145 46.9
Sabra19G0044200 Salix brachista HOM05D003715 ORTHO05D003958 1.1e-23 114.0 150 44.0
Sabra19G0047500 Salix brachista HOM05D003715 ORTHO05D003958 1.1e-23 114.0 150 44.0
TAR633G2492 Trochodendron aralioides HOM05D003715 ORTHO05D003958 1.1e-23 114.0 143 47.6
Oeu035703.1 Olea europaea HOM05D003715 ORTHO05D003958 1.7e-22 110.2 142 45.8
Cfa001533 Carpinus fangiana HOM05D003715 ORTHO05D003958 2.2e-22 109.8 147 46.9
Aqoxy2G00514 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 3.7e-22 109.0 145 45.5
CiPaw.10G001300 Carya illinoinensis HOM05D003715 ORTHO05D003958 4.8e-22 108.6 147 46.3
MBI04_g47731_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 4.8e-22 108.6 143 44.1
MBI04_g28023_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 8.2e-22 107.8 143 44.1
Manes.09G140500 Manihot esculenta HOM05D003715 ORTHO05D003958 8.2e-22 107.8 163 39.3
vmacro12564 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 8.2e-22 107.8 146 42.5
Actinidia30549 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.1e-21 107.5 156 42.9
MSTRG.26069 Avicennia marina HOM05D003715 ORTHO05D003958 1.8e-21 106.7 143 44.8
Hma1.2p1_0152F.1_g067600 Hydrangea macrophylla HOM05D003715 ORTHO05D003958 2.4e-21 106.3 142 41.5
Manes.08G145000 Manihot esculenta HOM05D003715 ORTHO05D003958 3.1e-21 105.9 143 43.4
Dinv14575 Davidia involucrata HOM05D003715 ORTHO05D003958 4.1e-21 105.5 143 46.9
Sc13g0002630 Simmondsia chinensis HOM05D003715 ORTHO05D003958 9.1e-21 104.4 153 39.9
QL07p018445 Quercus lobata HOM05D003715 ORTHO05D003958 1.2e-20 104.0 148 45.3
CiPaw.09G002400 Carya illinoinensis HOM05D003715 ORTHO05D003958 2.0e-20 103.2 141 46.8
Rhsim04G0091400 Rhododendron simsii HOM05D006013 ORTHO05D007383 4.5e-20 102.1 140 44.3
Eucgr.A02102 Eucalyptus grandis HOM05D003715 ORTHO05D003958 5.9e-20 101.7 145 44.1
Actinidia22080 Actinidia chinensis HOM05D003715 ORTHO05D003958 2.9e-19 99.4 159 42.1
Atru.chr2.1400 Acer truncatum HOM05D003715 ORTHO05D003958 1.4e-18 97.1 141 39.7
Thecc.05G249800 Theobroma cacao HOM05D003715 ORTHO05D003958 2.5e-18 96.3 144 39.6
TWI32G0411 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 7.2e-18 94.7 147 38.8
Dinv37021 Davidia involucrata HOM05D003715 ORTHO05D003958 2.1e-17 93.2 150 43.3
TWI34G1349 Tripterygium wilfordii HOM05D003715 ORTHO05D003958 2.7e-17 92.8 147 40.1
EL10Ac3g06828 Beta vulgaris HOM05D003715 ORTHO05D003958 6.1e-17 91.7 143 40.6
VMungo0464G1653 Vigna mungo HOM05D003715 ORTHO05D003958 6.1e-17 91.7 140 39.3
Nn2g12054 Nelumbo nucifera HOM05D003715 ORTHO05D003958 7.9e-17 91.3 142 41.5
Oeu024502.1 Olea europaea HOM05D003715 ORTHO05D003958 7.9e-17 91.3 142 40.1
HanXRQChr14g0438161 Helianthus annuus HOM05D003715 ORTHO05D003958 1.0e-16 90.9 142 42.3
PGR042G0616 Punica granatum HOM05D003715 ORTHO05D003958 1.0e-16 90.9 147 42.9
Hund19231 Selenicereus undatus HOM05D003715 ORTHO05D003958 1.4e-16 90.5 143 39.9
Aqoxy1G00472 Aquilegia oxysepala HOM05D003715 ORTHO05D003958 5.1e-16 88.6 145 37.2
Phvul.004G080700 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 5.1e-16 88.6 140 35.7
ECA238G2879 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.1e-15 87.4 146 42.5
Ciclev10021362m.g Citrus clementina HOM05D003715 ORTHO05D003958 2.0e-15 86.7 146 41.1
Gohir.D11G246200 Gossypium hirsutum HOM05D003715 ORTHO05D003958 2.6e-15 86.3 152 34.2
Gorai.007G262000 Gossypium raimondii HOM05D003715 ORTHO05D003958 4.4e-15 85.5 146 35.6
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 5.7e-15 85.1 142 40.8
Solyc10g078590.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 5.7e-15 85.1 141 40.4
Glyma.02G072500 Glycine max HOM05D003715 ORTHO05D003958 9.7e-15 84.3 142 35.2
Sopen10g029220 Solanum pennellii HOM05D003715 ORTHO05D003958 1.7e-14 83.6 141 39.7
Ca_04486_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 3.7e-14 82.4 146 32.2
PGSC0003DMG400008354 Solanum tuberosum HOM05D003715 ORTHO05D003958 3.7e-14 82.4 141 39.0
TPR.G9142 Trifolium pratense HOM05D003715 ORTHO05D003958 3.7e-14 82.4 141 34.0
Gohir.A11G235300 Gossypium hirsutum HOM05D003715 ORTHO05D003958 4.8e-14 82.0 145 35.2
THA.LOC104820776 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.8e-14 82.0 152 35.5
Duzib106G1922 Durio zibethinus HOM05D003715 ORTHO05D003958 6.3e-14 81.6 144 36.8
HanXRQChr13g0397871 Helianthus annuus HOM05D003715 ORTHO05D003958 6.3e-14 81.6 157 34.4
Lsat_1_v5_gn_2_58261 Lactuca sativa HOM05D003715 ORTHO05D003958 6.3e-14 81.6 139 41.0
Lalb_Chr02g0157161 Lupinus albus HOM05D003715 ORTHO05D003958 6.3e-14 81.6 141 36.9
ClCG04G005350 Citrullus lanatus HOM05D003715 ORTHO05D003958 8.2e-14 81.3 140 38.6
DCAR_019875 Daucus carota HOM05D003715 ORTHO05D003958 8.2e-14 81.3 141 39.0
Medtr7g085790 Medicago truncatula HOM05D003715 ORTHO05D003958 8.2e-14 81.3 139 35.3
CANSAT78G1806 Cannabis sativa HOM05D003715 ORTHO05D003958 1.1e-13 80.9 156 37.2
Nitab4.5_0000658g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.1e-13 80.9 146 41.1
MELO3C008806.2 Cucumis melo HOM05D003715 ORTHO05D003958 1.8e-13 80.1 140 40.7
Sed0021221 Sechium edule HOM05D003715 ORTHO05D003958 1.8e-13 80.1 140 40.7
CsaV3_4G013240 Cucumis sativus L. HOM05D003715 ORTHO05D003958 3.1e-13 79.3 140 40.0
Medtr6g029250 Medicago truncatula HOM05D003715 ORTHO05D003958 4.1e-13 79.0 143 35.0
Glyma.16G153700 Glycine max HOM05D003715 ORTHO05D003958 5.3e-13 78.6 142 33.8
Psat1g091040 Pisum sativum HOM05D003715 ORTHO05D003958 5.3e-13 78.6 141 34.0
Lj1g0012553 Lotus japonicus HOM05D003715 ORTHO05D003958 6.9e-13 78.2 134 32.1
TPR.G5870 Trifolium pratense HOM05D003715 ORTHO05D003958 9.1e-13 77.8 143 35.0
COL.COLO4_36085 Corchorus olitorius HOM05D003715 ORTHO05D003958 1.2e-12 77.4 145 37.9
Carub.0006s1642 Capsella rubella HOM05D003715 ORTHO05D003958 1.5e-12 77.0 152 36.8
vmacro09135 Vaccinium macrocarpon HOM05D003715 ORTHO05D003958 1.5e-12 77.0 134 41.8
Solyc10g080670.2 Solanum lycopersicum HOM05D003715 ORTHO05D003958 2.6e-12 76.3 118 44.1
Sopen10g031210 Solanum pennellii HOM05D003715 ORTHO05D003958 2.6e-12 76.3 118 44.1
Nitab4.5_0001079g0120 Nicotiana tabacum HOM05D003715 ORTHO05D003958 3.4e-12 75.9 134 40.3
Lj1g0002462 Lotus japonicus HOM05D003715 ORTHO05D003958 4.5e-12 75.5 140 32.9
PGR142G1981 Punica granatum HOM05D003715 ORTHO05D003958 4.5e-12 75.5 153 37.3
CDE02G4343 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 5.9e-12 75.1 149 39.6
HanXRQChr02g0054571 Helianthus annuus HOM05D003715 ORTHO05D003958 5.9e-12 75.1 147 34.7
Ca_08274_v3 Cicer arietinum L. HOM05D003715 ORTHO05D003958 7.7e-12 74.7 142 31.7
Thhalv10021350m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 7.7e-12 74.7 152 32.9
Lsat_1_v5_gn_6_37461 Lactuca sativa HOM05D003715 ORTHO05D003958 7.7e-12 74.7 132 34.8
PGSC0003DMG400023700 Solanum tuberosum HOM05D003715 ORTHO05D003958 7.7e-12 74.7 109 44.0
Carub.0003s0306 Capsella rubella HOM05D003715 ORTHO05D003958 1.0e-11 74.3 150 32.0
ECA233G0839 Erigeron canadensis HOM05D003715 ORTHO05D003958 1.0e-11 74.3 157 35.7
AT5G18130 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 2.2e-11 73.2 151 34.4
Peaxi162Scf00463g00019 Petunia axillaris HOM05D003715 ORTHO05D003958 2.2e-11 73.2 154 37.7
ATR0737G080 Amborella trichopoda HOM05D003715 ORTHO05D003958 2.9e-11 72.8 140 37.1
SalBow1G3164 Salvia bowleyana HOM05D003715 ORTHO05D003958 2.9e-11 72.8 146 32.9
MBI04_g37012_MAGBIO Magnolia biondii HOM05D003715 ORTHO05D003958 3.8e-11 72.4 152 35.5
Nitab4.5_0009367g0020 Nicotiana tabacum HOM05D003715 ORTHO05D003958 6.5e-11 71.6 115 42.6
AL6G29330 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 8.5e-11 71.2 151 35.1
Sp6g26180 Schrenkiella parvula HOM05D003715 ORTHO05D003958 8.5e-11 71.2 161 32.9
Nitab4.5_0002769g0040 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.9e-10 70.1 141 36.9
AL3G13760 Arabidopsis lyrata HOM05D003715 ORTHO05D003958 2.5e-10 69.7 161 32.9
Prupe.7G006100 Prunus persica HOM05D003715 ORTHO05D003958 2.5e-10 69.7 174 32.8
MD12G1005100 Malus domestica HOM05D003715 ORTHO05D003958 3.2e-10 69.3 155 35.5
Sed0002226 Sechium edule HOM05D003715 ORTHO05D003958 4.2e-10 68.9 155 35.5
A02p04750 Brassica napus HOM05D003715 ORTHO05D003958 7.2e-10 68.2 156 30.8
BraA05t23092Z Brassica rapa HOM05D003715 ORTHO05D003958 7.2e-10 68.2 150 29.3
Thhalv10014292m.g Eutrema salsugineum HOM05D003715 ORTHO05D003958 7.2e-10 68.2 156 34.0
RcHm_v2.0_Chr3g0497011 Rosa chinensis HOM05D003715 ORTHO05D003958 7.2e-10 68.2 152 31.6
Cc06_g23060 Coffea canephora HOM05D003715 ORTHO05D003958 9.4e-10 67.8 146 34.9
SGA_v2.0_scaffold94G28404 Striga asiatica HOM05D003715 ORTHO05D003958 1.2e-09 67.4 143 36.4
AT3G03870 Arabidopsis thaliana HOM05D003715 ORTHO05D003958 1.6e-09 67.0 155 31.6
arahy.Tifrunner.gnm1.ann1.V3MY1S Arachis hypogaea HOM05D003715 ORTHO05D003958 2.1e-09 66.6 85 36.5
Glyma.19G112800 Glycine max HOM05D003715 ORTHO05D003958 2.1e-09 66.6 162 30.9
Lalb_Chr22g0359081 Lupinus albus HOM05D003715 ORTHO05D003958 2.1e-09 66.6 143 30.8
VMungo1383G2890 Vigna mungo HOM05D003715 ORTHO05D003958 2.1e-09 66.6 73 41.1
Sp3g02840 Schrenkiella parvula HOM05D003715 ORTHO05D003958 2.7e-09 66.2 152 33.6
BcaB08g36703 Brassica carinata HOM05D003715 ORTHO05D003958 3.6e-09 65.9 157 29.9
Peaxi162Scf00003g04827 Petunia axillaris HOM05D003715 ORTHO05D003958 3.6e-09 65.9 142 35.9
THA.LOC104827275 Tarenaya hassleriana HOM05D003715 ORTHO05D003958 4.7e-09 65.5 141 36.2
BcaB01g06399 Brassica carinata HOM05D003715 ORTHO05D003958 6.1e-09 65.1 149 32.2
MD14G1003600 Malus domestica HOM05D003715 ORTHO05D003958 6.1e-09 65.1 151 35.8
A05p43520 Brassica napus HOM05D003715 ORTHO05D003958 8.0e-09 64.7 150 28.7
BcaB05g23302 Brassica carinata HOM05D003715 ORTHO05D003958 1.0e-08 64.3 154 29.9
A03p08670 Brassica napus HOM05D003715 ORTHO05D003958 1.0e-08 64.3 150 28.0
A10p21370 Brassica napus HOM05D003715 ORTHO05D003958 1.0e-08 64.3 151 30.5
C02p09710 Brassica napus HOM05D003715 ORTHO05D003958 1.0e-08 64.3 154 30.5
BolC2t06880H Brassica oleracea HOM05D003715 ORTHO05D003958 1.0e-08 64.3 154 30.5
Nitab4.5_0000358g0150 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.0e-08 64.3 141 36.9
Aa31LG5G14450 Aethionema arabicum HOM05D003715 ORTHO05D003958 1.4e-08 63.9 151 32.5
CDE05G3048 Ceratophyllum demersum HOM05D003715 ORTHO05D003958 1.4e-08 63.9 149 35.6
Glyma.16G040300 Glycine max HOM05D003715 ORTHO05D003958 1.4e-08 63.9 163 30.7
Psat3g088760 Pisum sativum HOM05D003715 ORTHO05D003958 1.4e-08 63.9 140 29.3
Actinidia38611 Actinidia chinensis HOM05D003715 ORTHO05D003958 1.8e-08 63.5 174 31.6
BolC9t58728H Brassica oleracea HOM05D003715 ORTHO05D003958 1.8e-08 63.5 151 29.8
BraA10t44200Z Brassica rapa HOM05D003715 ORTHO05D003958 1.8e-08 63.5 151 30.5
Os03g0806600 Oryza sativa ssp. japonica HOM05D003715 ORTHO05D003958 1.8e-08 63.5 92 41.3
BcaB01g05177 Brassica carinata HOM05D003715 ORTHO05D003958 2.3e-08 63.2 150 29.3
C03p10110 Brassica napus HOM05D003715 ORTHO05D003958 2.3e-08 63.2 150 29.3
BolC3t13497H Brassica oleracea HOM05D003715 ORTHO05D003958 2.3e-08 63.2 150 29.3
BraA03t10190Z Brassica rapa HOM05D003715 ORTHO05D003958 2.3e-08 63.2 150 29.3
BcaC05g29901 Brassica carinata HOM05D003715 ORTHO05D003958 3.0e-08 62.8 161 29.8
BcaC05g30247 Brassica carinata HOM05D003715 ORTHO05D003958 3.0e-08 62.8 158 28.5
BolC5t34973H Brassica oleracea HOM05D003715 ORTHO05D003958 3.0e-08 62.8 161 29.8
Cpa.g.sc51.130 Carica papaya HOM05D003715 ORTHO05D003958 3.9e-08 62.4 87 43.7
BolC1t05801H Brassica oleracea HOM05D003715 ORTHO05D003958 5.2e-08 62.0 150 31.3
BraA02t05434Z Brassica rapa HOM05D003715 ORTHO05D003958 5.2e-08 62.0 154 31.2
Lalb_Chr14g0364551 Lupinus albus HOM05D003715 ORTHO05D003958 6.7e-08 61.6 136 30.1
C09p58840 Brassica napus HOM05D003715 ORTHO05D003958 8.8e-08 61.2 151 28.5
BcaC03g13579 Brassica carinata HOM05D003715 ORTHO05D003958 1.1e-07 60.8 154 29.9
CSS0027479 Camellia sinensis var. sinensis HOM05D003715 ORTHO05D003958 1.5e-07 60.5 55 41.8
FvH4_1g28230 Fragaria vesca HOM05D003715 ORTHO05D003958 2.0e-07 60.1 160 31.9
CARHR077990 Cardamine hirsuta HOM05D003715 ORTHO05D003958 2.6e-07 59.7 152 32.9
CARHR194940 Cardamine hirsuta HOM05D003715 ORTHO05D003958 3.3e-07 59.3 147 30.6
Duzib106G0556 Durio zibethinus HOM05D003715 ORTHO05D003958 3.3e-07 59.3 112 36.6
FAN26G1768 Fragaria x ananassa HOM05D003715 ORTHO05D003958 4.4e-07 58.9 155 33.5
FAN23G0877 Fragaria x ananassa HOM05D003715 ORTHO05D003958 5.7e-07 58.5 160 31.2
CDE02G1486 Ceratophyllum demersum HOM05D002360 ORTHO05D006297 7.4e-07 58.2 152 32.9
FAN19G0160 Fragaria x ananassa HOM05D003715 ORTHO05D003958 7.4e-07 58.2 157 33.1
Phvul.001G111500 Phaseolus vulgaris HOM05D003715 ORTHO05D003958 7.4e-07 58.2 128 31.2
Nitab4.5_0000394g0140 Nicotiana tabacum HOM05D003715 ORTHO05D003958 1.7e-06 57.0 153 37.3
BcaNung05741 Brassica carinata HOM05D003715 ORTHO05D003958 2.8e-06 56.2 150 33.3
Zm00001eb302900 Zea mays HOM05D003715 ORTHO05D003958 6.3e-06 55.1 54 40.7
Peaxi162Scf00249g00717 Petunia axillaris HOM05D003715 ORTHO05D003958 8.2e-06 54.7 105 39.0


User provided reference genes

Program Settings