Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3023 Papaver somniferum HOM05D003744 ORTHO05D004327 2.4e-237 825.1 406 100.0
Aqoxy1G00571 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 1.3e-166 590.1 413 74.8
Nn2g14543 Nelumbo nucifera HOM05D003744 ORTHO05D004327 1.3e-158 563.5 410 70.5
Ca_07785_v3 Cicer arietinum L. HOM05D003744 ORTHO05D004327 1.6e-153 546.6 407 68.3
Medtr7g073970 Medicago truncatula HOM05D003744 ORTHO05D004327 2.6e-151 539.3 410 66.6
Prupe.1G346400 Prunus persica HOM05D003744 ORTHO05D004327 9.9e-151 537.3 322 79.5
Lj1g0013770 Lotus japonicus HOM05D003744 ORTHO05D004327 1.3e-150 537.0 419 65.6
MD15G1355200 Malus domestica HOM05D003744 ORTHO05D004327 2.2e-150 536.2 407 67.8
QL03p042814 Quercus lobata HOM05D003744 ORTHO05D004327 3.8e-150 535.4 297 85.2
QL03p058539 Quercus lobata HOM05D003744 ORTHO05D004327 3.8e-150 535.4 300 84.7
arahy.Tifrunner.gnm1.ann1.G2KDP7 Arachis hypogaea HOM05D003744 ORTHO05D004327 4.9e-150 535.0 417 66.4
Prupe.4G276200 Prunus persica HOM05D003744 ORTHO05D004327 6.4e-150 534.6 416 67.3
COL.COLO4_10100 Corchorus olitorius HOM05D003744 ORTHO05D004327 1.1e-149 533.9 408 68.6
arahy.Tifrunner.gnm1.ann1.DDPE54 Arachis hypogaea HOM05D003744 ORTHO05D004327 2.4e-149 532.7 417 66.2
CiPaw.05G168300 Carya illinoinensis HOM05D003744 ORTHO05D004327 2.4e-149 532.7 408 65.7
Glyma.18G216400 Glycine max HOM05D003744 ORTHO05D004327 3.2e-149 532.3 409 66.5
PGSC0003DMG400024499 Solanum tuberosum HOM05D003744 ORTHO05D004327 3.2e-149 532.3 305 81.6
Manes.01G040712 Manihot esculenta HOM05D003744 ORTHO05D004327 7.1e-149 531.2 413 65.9
Thecc.02G161400 Theobroma cacao HOM05D003744 ORTHO05D004327 9.2e-149 530.8 408 68.4
Gorai.008G149600 Gossypium raimondii HOM05D003744 ORTHO05D004327 1.6e-148 530.0 332 78.6
Lalb_Chr12g0205351 Lupinus albus HOM05D003744 ORTHO05D004327 2.1e-148 529.6 410 67.8
CSS0044819 Camellia sinensis var. sinensis HOM05D003744 ORTHO05D004327 2.7e-148 529.3 422 67.3
Gohir.A12G134500 Gossypium hirsutum HOM05D003744 ORTHO05D004327 4.6e-148 528.5 359 74.1
GSVIVG01012037001 Vitis vinifera HOM05D003744 ORTHO05D004327 6.0e-148 528.1 325 79.1
Cfa008732 Carpinus fangiana HOM05D003744 ORTHO05D004327 7.8e-148 527.7 415 67.5
RcHm_v2.0_Chr5g0044851 Rosa chinensis HOM05D003744 ORTHO05D004327 7.8e-148 527.7 380 69.5
Sabra05G0077500 Salix brachista HOM05D003744 ORTHO05D004327 1.0e-147 527.3 412 67.7
VMungo1383G1042 Vigna mungo HOM05D003744 ORTHO05D004327 2.3e-147 526.2 409 65.8
FvH4_4g36840 Fragaria vesca HOM05D003744 ORTHO05D004327 8.7e-147 524.2 405 67.4
PGR044G0777 Punica granatum HOM05D003744 ORTHO05D004327 8.7e-147 524.2 311 80.7
Dinv17603 Davidia involucrata HOM05D003744 ORTHO05D004327 1.9e-146 523.1 397 68.0
AT4G23660 Arabidopsis thaliana HOM05D003744 ORTHO05D004327 2.5e-146 522.7 409 67.5
Gohir.D12G138100 Gossypium hirsutum HOM05D003744 ORTHO05D004327 2.5e-146 522.7 408 67.6
Ciclev10031746m.g Citrus clementina HOM05D003744 ORTHO05D004327 3.3e-146 522.3 403 66.3
Atru.chr11.479 Acer truncatum HOM05D003744 ORTHO05D004327 5.6e-146 521.5 405 66.9
AL7G29700 Arabidopsis lyrata HOM05D003744 ORTHO05D004327 9.6e-146 520.8 414 67.4
CANSAT78G0298 Cannabis sativa HOM05D003744 ORTHO05D004327 1.2e-145 520.4 315 78.7
arahy.Tifrunner.gnm1.ann1.686LQU Arachis hypogaea HOM05D003744 ORTHO05D004327 1.6e-145 520.0 421 64.1
RcHm_v2.0_Chr4g0446591 Rosa chinensis HOM05D003744 ORTHO05D004327 1.6e-145 520.0 313 79.9
Sc23g0003470 Simmondsia chinensis HOM05D003744 ORTHO05D004327 1.6e-145 520.0 315 78.4
Phvul.008G080300 Phaseolus vulgaris HOM05D003744 ORTHO05D004327 2.1e-145 519.6 411 65.5
Sp7g21590 Schrenkiella parvula HOM05D003744 ORTHO05D004327 8.1e-145 517.7 406 65.8
CsaV3_3G031430 Cucumis sativus L. HOM05D003744 ORTHO05D004327 2.4e-144 516.2 307 79.2
EL10Ac7g17368 Beta vulgaris HOM05D003744 ORTHO05D004327 3.1e-144 515.8 403 64.5
Sed0024199 Sechium edule HOM05D003744 ORTHO05D004327 3.1e-144 515.8 305 79.7
Carub.0007s1748 Capsella rubella HOM05D003744 ORTHO05D004327 4.0e-144 515.4 406 67.2
MELO3C024026.2 Cucumis melo HOM05D003744 ORTHO05D004327 4.0e-144 515.4 345 73.3
HanXRQChr11g0332851 Helianthus annuus HOM05D003744 ORTHO05D004327 4.0e-144 515.4 410 64.6
BcaNung01074 Brassica carinata HOM05D003744 ORTHO05D004327 5.2e-144 515.0 405 65.7
Cc04_g13930 Coffea canephora HOM05D003744 ORTHO05D004327 6.9e-144 514.6 374 69.8
ECA233G3748 Erigeron canadensis HOM05D003744 ORTHO05D004327 1.2e-143 513.8 299 80.9
Thhalv10025345m.g Eutrema salsugineum HOM05D003744 ORTHO05D004327 2.0e-143 513.1 410 65.6
THA.LOC104814817 Tarenaya hassleriana HOM05D003744 ORTHO05D004327 2.0e-143 513.1 319 77.7
MSTRG.11446 Avicennia marina HOM05D003744 ORTHO05D004327 3.4e-143 512.3 402 66.9
BcaC09g50959 Brassica carinata HOM05D003744 ORTHO05D004327 1.7e-142 510.0 410 65.6
Migut.I00018 Erythranthe guttata HOM05D003744 ORTHO05D004327 1.7e-142 510.0 412 65.3
C01p18750 Brassica napus HOM05D003744 ORTHO05D004327 2.2e-142 509.6 410 65.6
A01p14960 Brassica napus HOM05D003744 ORTHO05D004327 7.1e-141 504.6 409 64.8
Rhsim09G0044700 Rhododendron simsii HOM05D003744 ORTHO05D004327 2.1e-140 503.1 357 72.3
Aa31LG6G6900 Aethionema arabicum HOM05D003744 ORTHO05D004327 2.7e-140 502.7 409 64.5
BolC1t01805H Brassica oleracea HOM05D003744 ORTHO05D004327 2.3e-139 499.6 426 63.1
BraA01t01437Z Brassica rapa HOM05D003744 ORTHO05D004327 3.0e-139 499.2 424 63.0
Os08g0322600 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 3.0e-139 499.2 322 73.3
RhsimUnG0157000 Rhododendron simsii HOM05D003744 ORTHO05D004327 3.0e-139 499.2 357 71.7
BcaNung03441 Brassica carinata HOM05D003744 ORTHO05D004327 8.7e-139 497.7 403 64.0
C07p52950 Brassica napus HOM05D003744 ORTHO05D004327 8.7e-139 497.7 403 64.0
A03p54630 Brassica napus HOM05D003744 ORTHO05D004327 1.9e-138 496.5 409 64.1
ATR1100G008 Amborella trichopoda HOM05D003744 ORTHO05D004327 1.3e-137 493.8 381 65.9
Lsat_1_v5_gn_6_17921 Lactuca sativa HOM05D003744 ORTHO05D004327 1.3e-137 493.8 294 80.6
vmacro07295 Vaccinium macrocarpon HOM05D003744 ORTHO05D004327 1.3e-137 493.8 388 68.3
BcaNung03181 Brassica carinata HOM05D003744 ORTHO05D004327 2.1e-137 493.0 407 64.6
Solyc03g114300.4 Solanum lycopersicum HOM05D003744 ORTHO05D004327 2.8e-137 492.7 285 81.1
Potri.005G093600 Populus trichocarpa HOM05D003744 ORTHO05D004327 8.1e-137 491.1 310 74.8
Haze_11743 Corylus avellana HOM05D003744 ORTHO05D004327 4.0e-136 488.8 407 65.8
AUR62036656 Chenopodium quinoa HOM05D003744 ORTHO05D004327 5.3e-136 488.4 391 65.2
Aqoxy5G02199 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 5.8e-135 485.0 358 72.6
Aqoxy94s001 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 5.8e-135 485.0 358 72.6
Aqoxy94s003 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 5.8e-135 485.0 358 72.6
BolC7t45794H Brassica oleracea HOM05D003744 ORTHO05D004327 1.3e-134 483.8 419 61.1
Duzib132G0191 Durio zibethinus HOM05D003744 ORTHO05D004327 2.9e-134 482.6 313 74.4
Prupe.1G346500 Prunus persica HOM05D003744 ORTHO05D004327 2.9e-134 482.6 320 72.8
ClCG10G011930 Citrullus lanatus HOM05D003744 ORTHO05D004327 1.2e-132 477.2 334 72.2
Aa31LG9G10990 Aethionema arabicum HOM05D003744 ORTHO05D004327 3.0e-131 472.6 306 73.5
TAR374G0876 Trochodendron aralioides HOM05D003744 ORTHO05D004327 2.5e-130 469.5 416 62.7
Lj8A264T57 Lonicera japonica HOM05D003744 ORTHO05D004327 6.2e-129 464.9 372 65.3
MD11G1112600 Malus domestica HOM05D003744 ORTHO05D004327 6.2e-129 464.9 410 60.0
BraA03t14530Z Brassica rapa HOM05D003744 ORTHO05D004327 2.4e-128 463.0 392 64.5
Zm00001eb190740 Zea mays HOM05D003744 ORTHO05D004327 2.6e-127 459.5 297 73.7
Mapoly0100s0056 Marchantia polymorpha HOM05D003744 ORTHO05D004327 2.9e-126 456.1 313 68.7
CAN.G781.16 Capsicum annuum HOM05D003744 ORTHO05D004327 9.3e-125 451.1 257 82.9
SMO164G0212 Selaginella moellendorffii HOM05D003744 ORTHO05D004327 2.7e-124 449.5 292 72.3
Thecc.02G176000 Theobroma cacao HOM05D003744 ORTHO05D004327 3.5e-124 449.1 348 63.5
SalBow1G2569 Salvia bowleyana HOM05D003744 ORTHO05D004327 4.6e-124 448.7 326 69.0
AagrBONN_evm.TU.Sc2ySwM_340.154 Anthoceros agrestis HOM05D003744 ORTHO05D004327 1.0e-123 447.6 312 67.3
Ah.15g093700 Amaranthus hybridus HOM05D003744 ORTHO05D004327 5.1e-123 445.3 394 60.4
MD11G1112700 Malus domestica HOM05D003744 ORTHO05D004327 8.2e-121 438.0 313 68.7
Os08g0388900 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 1.4e-120 437.2 295 68.5
PSO170G1927 Papaver somniferum HOM05D003744 ORTHO05D004327 6.9e-120 434.9 401 56.9
TWI53G1336 Tripterygium wilfordii HOM05D003744 ORTHO05D004327 1.2e-119 434.1 358 64.8
Peaxi162Scf00017g02835 Petunia axillaris HOM05D003744 ORTHO05D004327 3.4e-119 432.6 417 57.3
Duzib132G0180 Durio zibethinus HOM05D003744 ORTHO05D004327 4.6e-116 422.2 334 63.2
DCAR_026464 Daucus carota HOM05D003744 ORTHO05D004327 6.0e-116 421.8 242 81.8
Nitab4.5_0000852g0010 Nicotiana tabacum HOM05D003744 ORTHO05D004327 1.3e-115 420.6 292 71.9
DCAR_029703 Daucus carota HOM05D003744 ORTHO05D004327 2.3e-115 419.9 245 80.8
AUR62034614 Chenopodium quinoa HOM05D003744 ORTHO05D004327 1.3e-113 414.1 236 82.6
unitig_52.g17488 Utricularia gibba HOM05D003744 ORTHO05D004327 1.3e-113 414.1 328 66.2
arahy.Tifrunner.gnm1.ann1.Z9T1G4 Arachis hypogaea HOM05D003744 ORTHO05D004327 8.2e-113 411.4 419 54.9
Gorai.008G153000 Gossypium raimondii HOM05D003744 ORTHO05D004327 3.1e-112 409.5 339 59.0
TWI53G1840 Tripterygium wilfordii HOM05D003744 ORTHO05D004327 9.0e-112 407.9 413 55.9
arahy.Tifrunner.gnm1.ann1.KM1SID Arachis hypogaea HOM05D003744 ORTHO05D004327 2.6e-111 406.4 262 76.3
Gohir.A12G137600 Gossypium hirsutum HOM05D003744 ORTHO05D004327 4.5e-111 405.6 339 58.4
Gohir.D12G141600 Gossypium hirsutum HOM05D003744 ORTHO05D004327 5.0e-110 402.1 339 58.4
Gohir.A12G137650 Gossypium hirsutum HOM05D003744 ORTHO05D004327 1.5e-106 390.6 339 57.5
Nitab4.5_0005862g0050 Nicotiana tabacum HOM05D003744 ORTHO05D004327 1.7e-105 387.1 404 53.7
CDE05G3331 Ceratophyllum demersum HOM05D003744 ORTHO05D004327 9.1e-104 381.3 290 66.2
QL08p053649 Quercus lobata HOM05D003744 ORTHO05D004327 1.2e-103 380.9 215 85.1
SGA_v2.0_scaffold90G27943 Striga asiatica HOM05D003744 ORTHO05D004327 1.1e-101 374.4 243 75.7
BcaB03g12405 Brassica carinata HOM05D003744 ORTHO05D004327 4.7e-100 369.0 256 71.9
Pp3c17_13460 Physcomitrium patens HOM05D003744 ORTHO05D004327 6.1e-100 368.6 331 57.7
RcHm_v2.0_Chr5g0044921 Rosa chinensis HOM05D003744 ORTHO05D004327 2.6e-98 363.2 215 81.4
Cc04_g13880 Coffea canephora HOM05D003744 ORTHO05D004327 7.4e-98 361.7 347 52.2
Potri.005G093700 Populus trichocarpa HOM05D003744 ORTHO05D004327 8.2e-97 358.2 219 77.2
Sed0012155 Sechium edule HOM05D003744 ORTHO05D004327 5.3e-96 355.5 329 58.7
SalBow1G6149 Salvia bowleyana HOM05D003744 ORTHO05D004327 7.0e-96 355.1 303 61.1
Cre06.g291800 Chlamydomonas reinhardtii HOM05D003744 ORTHO05D004327 1.2e-92 344.4 287 60.3
MCO12G284 Micromonas commoda HOM05D003744 ORTHO05D004327 1.3e-89 334.3 300 57.0
Lj2g0000279 Lotus japonicus HOM05D003744 ORTHO05D004327 7.0e-88 328.6 220 72.7
CARHR231030 Cardamine hirsuta HOM05D003744 ORTHO05D004327 2.6e-87 326.6 298 60.7
TAR374G1448 Trochodendron aralioides HOM05D003744 ORTHO05D004327 1.4e-83 314.3 276 60.5
Medtr3g111660 Medicago truncatula HOM05D003744 ORTHO05D004327 1.2e-82 311.2 367 49.6
Os08g0389300 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 3.7e-81 306.2 204 71.1
Eucgr.G01369 Eucalyptus grandis HOM05D003744 ORTHO05D004327 6.5e-78 295.4 327 52.3
BcaC01g00486 Brassica carinata HOM05D003744 ORTHO05D004327 2.5e-77 293.5 308 54.5
TPR.G35100 Trifolium pratense HOM05D003744 ORTHO05D004327 2.7e-76 290.0 160 82.5
arahy.Tifrunner.gnm1.ann1.1L5CCL Arachis hypogaea HOM05D003744 ORTHO05D004327 1.4e-75 287.7 173 79.2
CBR_g5669 Chara braunii HOM05D003744 ORTHO05D004327 5.2e-75 285.8 215 67.0
TAR374G1156 Trochodendron aralioides HOM05D003744 ORTHO05D004327 5.7e-74 282.3 195 75.9
Eucgr.H03234 Eucalyptus grandis HOM05D003744 ORTHO05D004327 1.3e-73 281.2 158 82.9
FAN17G0528 Fragaria x ananassa HOM05D003744 ORTHO05D004327 1.7e-70 270.8 267 53.9
PRCOL_00006084 Prasinoderma coloniale HOM05D003744 ORTHO05D004327 2.9e-70 270.0 281 52.7
A08p21950 Brassica napus HOM05D003744 ORTHO05D004327 3.6e-68 263.1 188 68.1
Sopen03g033400 Solanum pennellii HOM05D003744 ORTHO05D004327 1.4e-67 261.2 157 79.0
Cc00_g30150 Coffea canephora HOM05D003744 ORTHO05D004327 7.5e-66 255.4 173 69.9
Haze_26705 Corylus avellana HOM05D003744 ORTHO05D004327 1.7e-65 254.2 282 44.3
SEGI_31034 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 5.4e-64 249.2 150 76.7
SHI31057 Sapria himalayana HOM05D000482 ORTHO05D000349 1.9e-61 240.7 239 51.9
TPR.G24330 Trifolium pratense HOM05D003744 ORTHO05D004327 7.3e-61 238.8 255 54.5
SEGI_29356 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 2.2e-57 227.3 276 45.3
Lj1g0011441 Lotus japonicus HOM05D003744 ORTHO05D004327 6.0e-55 219.2 137 73.7
SEGI_19125 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 6.0e-55 219.2 147 70.1
FAN07G0518 Fragaria x ananassa HOM05D003744 ORTHO05D004327 8.6e-54 215.3 144 71.5
Hund23867 Selenicereus undatus HOM05D003744 ORTHO05D004327 1.9e-53 214.2 147 70.1
Oeu024760.1 Olea europaea HOM05D003744 ORTHO05D004327 5.6e-53 212.6 158 65.2
HPP92_014779 Vanilla planifolia HOM05D003744 ORTHO05D004327 8.0e-52 208.8 140 69.3
Cfa021958 Carpinus fangiana HOM05D003744 ORTHO05D004327 5.2e-51 206.1 274 45.3
C03p80510 Brassica napus HOM05D003744 ORTHO05D004327 3.7e-49 199.9 190 60.0
Cc04_g15800 Coffea canephora HOM05D003744 ORTHO05D004327 5.1e-46 189.5 171 55.6
Cpa.g.sc5.31 Carica papaya HOM05D003744 ORTHO05D004327 4.3e-45 186.4 195 55.4
Gohir.A12G137450 Gossypium hirsutum HOM05D003744 ORTHO05D004327 8.1e-44 182.2 224 45.1
CBR_g4211 Chara braunii HOM05D003744 ORTHO05D004327 1.9e-40 171.0 127 63.0
MD16G1001300 Malus domestica HOM05D003744 ORTHO05D004327 5.4e-40 169.5 150 60.0
FAN12G4043 Fragaria x ananassa HOM05D003744 ORTHO05D004327 2.8e-36 157.1 191 48.7
QL08p053645 Quercus lobata HOM05D003744 ORTHO05D004327 2.0e-34 151.0 189 48.1
TAR374G0013 Trochodendron aralioides HOM05D003744 ORTHO05D004327 1.0e-30 138.7 81 79.0
Cc00_g32230 Coffea canephora HOM05D003744 ORTHO05D004327 2.0e-26 124.4 122 47.5
SEGI_11824 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 9.3e-24 115.5 70 78.6
Lalb_Chr12g0204281 Lupinus albus HOM05D003744 ORTHO05D004327 3.5e-23 113.6 72 76.4
Cc04_g13890 Coffea canephora HOM05D003744 ORTHO05D004327 1.7e-22 111.3 102 52.9
Glyma.09G272651 Glycine max HOM05D003744 ORTHO05D004327 2.1e-20 104.4 180 38.3
Lalb_Chr12g0204291 Lupinus albus HOM05D003744 ORTHO05D004327 1.5e-18 98.2 164 42.7
TPR.G23229 Trifolium pratense HOM05D003744 ORTHO05D004327 5.8e-18 96.3 53 77.4
RcHm_v2.0_Chr5g0044931 Rosa chinensis HOM05D003744 ORTHO05D004327 3.8e-17 93.6 64 64.1
Aqoxy5G00880 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 1.1e-16 92.0 60 75.0
BolC3t20296H Brassica oleracea HOM05D003744 ORTHO05D004327 1.3e-14 85.1 66 60.6
Cc04_g13900 Coffea canephora HOM05D003744 ORTHO05D004327 1.1e-13 82.0 56 73.2
DCAR_026463 Daucus carota HOM05D003744 ORTHO05D004327 2.5e-13 80.9 156 36.5
Migut.H00604 Erythranthe guttata HOM05D003744 ORTHO05D004327 2.1e-12 77.8 68 54.4
Cpa.g.sc5.29 Carica papaya HOM05D003744 ORTHO05D004327 3.1e-11 73.9 159 37.7
Migut.N01582 Erythranthe guttata HOM05D003744 ORTHO05D004327 3.1e-11 73.9 70 52.9
C03p80520 Brassica napus HOM05D003744 ORTHO05D004327 6.9e-11 72.8 48 72.9
vmacro10898 Vaccinium macrocarpon HOM05D003744 ORTHO05D004327 5.8e-10 69.7 45 73.3
RcHm_v2.0_Chr5g0044971 Rosa chinensis HOM05D003744 ORTHO05D004327 7.6e-10 69.3 43 76.7
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 6.7e-06 56.2 268 25.4


User provided reference genes

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