Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G3006 Papaver somniferum HOM05D031015 ORTHO05D002188 0.0e+00 1401.7 1046 100.0
PSO135G0315 Papaver somniferum HOM05D031015 ORTHO05D002188 0.0e+00 1217.6 1046 84.8
PSO170G1523 Papaver somniferum HOM05D031015 ORTHO05D002188 0.0e+00 1099.7 1017 79.2
PSO170G1432 Papaver somniferum HOM05D031015 ORTHO05D002188 1.9e-153 547.7 488 83.6
TAR374G1003 Trochodendron aralioides HOM05D002129 ORTHO05D002188 1.4e-26 126.3 285 34.4
Ciclev10018618m.g Citrus clementina HOM05D002129 ORTHO05D002188 5.1e-26 124.4 1136 24.7
MD06G1102300 Malus domestica HOM05D002129 ORTHO05D002188 1.5e-22 112.8 298 29.9
Rhsim07G0084000 Rhododendron simsii HOM05D002129 ORTHO05D002188 3.8e-21 108.2 305 30.8
CiPaw.11G123900 Carya illinoinensis HOM05D002129 ORTHO05D002188 9.4e-20 103.6 256 39.8
CiPaw.12G085000 Carya illinoinensis HOM05D002129 ORTHO05D002188 2.1e-19 102.4 310 35.5
QL02p031434 Quercus lobata HOM05D002129 ORTHO05D002188 4.7e-19 101.3 226 33.6
MBI07_g09921_MAGBIO Magnolia biondii HOM05D002129 ORTHO05D002188 6.7e-18 97.4 291 29.2
Sed0022097 Sechium edule HOM05D002129 ORTHO05D002188 1.5e-17 96.3 728 23.2
AUR62010809 Chenopodium quinoa HOM05D002129 ORTHO05D002188 1.3e-16 93.2 310 30.6
FAN18G4528 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.8e-16 92.0 198 35.9
FAN18G3989 Fragaria x ananassa HOM05D002129 ORTHO05D002188 3.7e-16 91.7 198 35.4
Ca_17494_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 1.1e-15 90.1 307 34.9
FvH4_5g04072 Fragaria vesca HOM05D002129 ORTHO05D002188 1.4e-15 89.7 1207 25.0
DCAR_005027 Daucus carota HOM05D002129 ORTHO05D002188 2.4e-15 89.0 233 31.8
FvH4_5g04071 Fragaria vesca HOM05D002129 ORTHO05D002188 5.3e-15 87.8 838 22.3
MD14G1121500 Malus domestica HOM05D002129 ORTHO05D002188 5.3e-15 87.8 1069 30.9
Medtr8g099275 Medicago truncatula HOM05D002129 ORTHO05D002188 9.1e-15 87.0 188 38.8
Sabra03G0098900 Salix brachista HOM05D002129 ORTHO05D002188 1.2e-14 86.7 193 34.2
vmacro13912 Vaccinium macrocarpon HOM05D002129 ORTHO05D002188 1.2e-14 86.7 301 33.2
CsaV3_4G006420 Cucumis sativus L. HOM05D002129 ORTHO05D002188 2.0e-14 85.9 299 26.1
FAN04G1467 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.6e-14 85.5 820 24.8
Psat7g027680 Pisum sativum HOM05D002129 ORTHO05D002188 4.5e-14 84.7 202 44.6
Lalb_Chr16g0390551 Lupinus albus HOM05D002129 ORTHO05D002188 5.9e-14 84.3 337 28.2
Sabra01G0070100 Salix brachista HOM05D002129 ORTHO05D002188 7.7e-14 84.0 315 31.4
TWI15G0725 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 7.7e-14 84.0 345 28.4
Actinidia27335 Actinidia chinensis HOM05D002129 ORTHO05D002188 1.0e-13 83.6 194 44.3
MELO3C016308.2 Cucumis melo HOM05D002129 ORTHO05D002188 1.3e-13 83.2 300 26.3
Dinv37550 Davidia involucrata HOM05D002129 ORTHO05D002188 1.3e-13 83.2 189 38.6
Lj4g0008940 Lotus japonicus HOM05D002129 ORTHO05D002188 1.7e-13 82.8 188 34.6
AUR62019808 Chenopodium quinoa HOM05D002129 ORTHO05D002188 2.9e-13 82.0 270 29.3
CSS0047098 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 5.0e-13 81.3 328 29.3
Gohir.D09G185400 Gossypium hirsutum HOM05D002129 ORTHO05D002188 5.0e-13 81.3 190 35.8
TAR374G0929 Trochodendron aralioides HOM05D002129 ORTHO05D002188 6.5e-13 80.9 188 36.2
Duzib068G1418 Durio zibethinus HOM05D002129 ORTHO05D002188 8.5e-13 80.5 1145 27.3
TPR.G3412 Trifolium pratense HOM05D002129 ORTHO05D002188 8.5e-13 80.5 276 32.2
FAN13G0971 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.1e-12 80.1 320 28.8
FAN08G2643 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.5e-12 79.7 218 30.3
Solyc08g082010.3 Solanum lycopersicum HOM05D002129 ORTHO05D002188 1.5e-12 79.7 250 31.6
Thecc.03G293200 Theobroma cacao HOM05D002129 ORTHO05D002188 1.9e-12 79.3 192 30.7
CANSAT21G2383 Cannabis sativa HOM05D002129 ORTHO05D002188 2.5e-12 79.0 172 33.7
RcHm_v2.0_Chr7g0195441 Rosa chinensis HOM05D002129 ORTHO05D002188 2.5e-12 79.0 322 26.1
Dinv38857 Davidia involucrata HOM05D002129 ORTHO05D002188 3.2e-12 78.6 301 29.6
Manes.01G045900 Manihot esculenta HOM05D002129 ORTHO05D002188 4.2e-12 78.2 1071 23.3
Ah.07g197190 Amaranthus hybridus HOM05D002129 ORTHO05D002188 5.5e-12 77.8 304 28.0
CSS0045654 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 5.5e-12 77.8 1156 29.0
Migut.A00679 Erythranthe guttata HOM05D002129 ORTHO05D002188 5.5e-12 77.8 295 28.5
Potri.003G137400 Populus trichocarpa HOM05D002129 ORTHO05D002188 5.5e-12 77.8 192 32.8
ClCG07G014890 Citrullus lanatus HOM05D002129 ORTHO05D002188 7.2e-12 77.4 730 22.7
Sopen08g030310 Solanum pennellii HOM05D002129 ORTHO05D002188 7.2e-12 77.4 310 29.4
Duzib084G0891 Durio zibethinus HOM05D002129 ORTHO05D002188 9.4e-12 77.0 199 33.2
Gohir.A02G102200 Gossypium hirsutum HOM05D002129 ORTHO05D002188 9.4e-12 77.0 415 26.0
Dinv37551 Davidia involucrata HOM05D002129 ORTHO05D002188 1.2e-11 76.6 310 30.0
RcHm_v2.0_Chr7g0195431 Rosa chinensis HOM05D002129 ORTHO05D002188 1.2e-11 76.6 188 38.3
TWI60G1278 Tripterygium wilfordii HOM05D002129 ORTHO05D002188 1.2e-11 76.6 321 29.0
arahy.Tifrunner.gnm1.ann1.Q3GPI2 Arachis hypogaea HOM05D002129 ORTHO05D002188 1.6e-11 76.3 296 28.7
MSTRG.1816 Avicennia marina HOM05D002129 ORTHO05D002188 1.6e-11 76.3 294 31.0
Gohir.D03G081900 Gossypium hirsutum HOM05D002129 ORTHO05D002188 2.1e-11 75.9 408 34.1
VMungo0251G1428 Vigna mungo HOM05D002129 ORTHO05D002188 2.1e-11 75.9 185 31.4
QL12p010595 Quercus lobata HOM05D002129 ORTHO05D002188 2.7e-11 75.5 310 30.3
unitig_52.g17439 Utricularia gibba HOM05D002129 ORTHO05D002188 2.7e-11 75.5 294 26.9
Atru.chr9.2042 Acer truncatum HOM05D002129 ORTHO05D002188 4.7e-11 74.7 91 45.1
FAN18G4347 Fragaria x ananassa HOM05D002129 ORTHO05D002188 4.7e-11 74.7 319 27.3
PGSC0003DMG400012303 Solanum tuberosum HOM05D002129 ORTHO05D002188 4.7e-11 74.7 239 31.0
Atru.chr9.2043 Acer truncatum HOM05D002129 ORTHO05D002188 6.1e-11 74.3 354 27.1
CSS0006894 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 6.1e-11 74.3 265 30.6
Gorai.003G081700 Gossypium raimondii HOM05D002129 ORTHO05D002188 6.1e-11 74.3 501 24.0
Gorai.006G207900 Gossypium raimondii HOM05D002129 ORTHO05D002188 6.1e-11 74.3 300 27.0
CSS0018198 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 8.0e-11 73.9 335 30.7
CSS0027740 Camellia sinensis var. sinensis HOM05D002129 ORTHO05D002188 8.0e-11 73.9 310 28.7
Ca_17495_v3 Cicer arietinum L. HOM05D002129 ORTHO05D002188 8.0e-11 73.9 189 42.3
Cc08_g15780 Coffea canephora HOM05D002129 ORTHO05D002188 8.0e-11 73.9 95 42.1
QL12p009828 Quercus lobata HOM05D002129 ORTHO05D002188 1.0e-10 73.6 310 30.0
FAN18G1710 Fragaria x ananassa HOM05D002129 ORTHO05D002188 1.4e-10 73.2 1096 20.2
QL02p031447 Quercus lobata HOM05D002129 ORTHO05D002188 1.4e-10 73.2 305 27.9
SGA_v2.0_scaffold173G39089 Striga asiatica HOM05D002129 ORTHO05D002188 1.8e-10 72.8 257 30.4
Manes.02G012600 Manihot esculenta HOM05D002129 ORTHO05D002188 4.0e-10 71.6 238 30.3
CAN.G825.42 Capsicum annuum HOM05D002129 ORTHO05D002188 6.7e-10 70.9 231 29.9
MD14G1121400 Malus domestica HOM05D002129 ORTHO05D002188 8.8e-10 70.5 295 27.8
Nitab4.5_0000223g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 8.8e-10 70.5 246 28.9
Ah.12g052310 Amaranthus hybridus HOM05D002129 ORTHO05D002188 1.2e-09 70.1 302 25.2
Gohir.A09G190800 Gossypium hirsutum HOM05D002129 ORTHO05D002188 1.2e-09 70.1 188 35.1
Peaxi162Scf00074g01134 Petunia axillaris HOM05D002129 ORTHO05D002188 1.2e-09 70.1 238 27.7
Rhsim02G0241100 Rhododendron simsii HOM05D002129 ORTHO05D002188 1.2e-09 70.1 212 32.5
CANSAT21G0822 Cannabis sativa HOM05D002129 ORTHO05D002188 2.0e-09 69.3 293 26.6
FAN04G1700 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.6e-09 68.9 359 24.8
FAN04G3154 Fragaria x ananassa HOM05D002129 ORTHO05D002188 2.6e-09 68.9 359 24.8
Lj8P210T83 Lonicera japonica HOM05D002129 ORTHO05D002188 2.6e-09 68.9 274 29.2
Migut.E01236 Erythranthe guttata HOM05D002129 ORTHO05D002188 3.3e-09 68.6 175 39.4
Solyc08g008260.2 Solanum lycopersicum HOM05D002129 ORTHO05D002188 3.3e-09 68.6 214 31.8
Sopen08g004110 Solanum pennellii HOM05D002129 ORTHO05D002188 3.3e-09 68.6 214 31.3
SGA_v2.0_scaffold144G35850 Striga asiatica HOM05D002129 ORTHO05D002188 4.4e-09 68.2 178 42.1
vmacro11445 Vaccinium macrocarpon HOM05D001971 ORTHO05D003057 5.7e-09 67.8 318 28.3
EL10Ac5g12884 Beta vulgaris HOM05D002129 ORTHO05D002188 7.5e-09 67.4 228 27.6
Aqoxy5G04152 Aquilegia oxysepala HOM05D002129 ORTHO05D002188 1.3e-08 66.6 1295 28.3
MSTRG.11936 Avicennia marina HOM05D002129 ORTHO05D002188 1.3e-08 66.6 300 28.0
PGR042G1587 Punica granatum HOM05D002129 ORTHO05D002188 1.3e-08 66.6 205 31.2
Glyma.08G021400 Glycine max HOM05D002129 ORTHO05D002188 1.7e-08 66.2 320 28.4
Prupe.5G115300 Prunus persica HOM05D002129 ORTHO05D002188 1.7e-08 66.2 297 25.3
Haze_08667 Corylus avellana HOM05D002129 ORTHO05D002188 2.2e-08 65.9 703 25.0
Migut.A00678 Erythranthe guttata HOM05D002129 ORTHO05D002188 2.2e-08 65.9 215 26.0
unitig_62.g23616 Utricularia gibba HOM05D002129 ORTHO05D002188 2.2e-08 65.9 306 25.8
Carub.0007s3359 Capsella rubella HOM05D002129 ORTHO05D002188 2.8e-08 65.5 183 38.8
Nitab4.5_0006656g0010 Nicotiana tabacum HOM05D002129 ORTHO05D002188 2.8e-08 65.5 216 30.6
SalBow1G3214 Salvia bowleyana HOM05D002129 ORTHO05D002188 2.8e-08 65.5 250 32.8
Sed0023438 Sechium edule HOM05D002129 ORTHO05D002188 2.8e-08 65.5 273 25.3
Nitab4.5_0002944g0210 Nicotiana tabacum HOM05D002129 ORTHO05D002188 3.7e-08 65.1 214 30.4
Oeu009945.1 Olea europaea HOM05D002129 ORTHO05D002188 3.7e-08 65.1 210 28.6
Lalb_Chr16g0376981 Lupinus albus HOM05D002129 ORTHO05D002188 4.8e-08 64.7 292 26.7
Psat7g027480 Pisum sativum HOM05D002129 ORTHO05D002188 4.8e-08 64.7 362 26.0
unitig_748.g7418 Utricularia gibba HOM05D002129 ORTHO05D002188 4.8e-08 64.7 336 25.0
Actinidia04211 Actinidia chinensis HOM05D002129 ORTHO05D002188 6.3e-08 64.3 312 27.9
BcaC04g22559 Brassica carinata HOM05D002129 ORTHO05D002188 8.2e-08 63.9 92 34.8
C09p17910 Brassica napus HOM05D002129 ORTHO05D002188 8.2e-08 63.9 92 34.8
BolC9t54688H Brassica oleracea HOM05D002129 ORTHO05D002188 8.2e-08 63.9 92 34.8
Duzib068G0910 Durio zibethinus HOM05D002129 ORTHO05D002188 8.2e-08 63.9 323 26.0
COL.COLO4_21718 Corchorus olitorius HOM05D002129 ORTHO05D002188 1.1e-07 63.5 534 27.2
Thhalv10023387m.g Eutrema salsugineum HOM05D002129 ORTHO05D002188 1.1e-07 63.5 178 37.6
Aa31LG9G340 Aethionema arabicum HOM05D002129 ORTHO05D002188 1.4e-07 63.2 198 37.4
BcaB07g31455 Brassica carinata HOM05D002129 ORTHO05D002188 1.4e-07 63.2 93 34.4
A09p14790 Brassica napus HOM05D002129 ORTHO05D002188 1.4e-07 63.2 91 35.2
Migut.E01235 Erythranthe guttata HOM05D002129 ORTHO05D002188 1.4e-07 63.2 262 29.4
SalBow8G2059 Salvia bowleyana HOM05D002129 ORTHO05D002188 1.4e-07 63.2 91 38.5
BcaC02g08917 Brassica carinata HOM05D002129 ORTHO05D002188 1.8e-07 62.8 176 34.1
C04p49150 Brassica napus HOM05D002129 ORTHO05D002188 1.8e-07 62.8 176 34.1
BolC4t26499H Brassica oleracea HOM05D002129 ORTHO05D002188 1.8e-07 62.8 176 34.1
Carub.0002s0048 Capsella rubella HOM05D002129 ORTHO05D002188 1.8e-07 62.8 93 35.5
CARHR046630 Cardamine hirsuta HOM05D002129 ORTHO05D002188 1.8e-07 62.8 87 36.8
Cfa012842 Carpinus fangiana HOM05D002129 ORTHO05D002188 1.8e-07 62.8 715 24.3
Carub.0007s3367 Capsella rubella HOM05D002129 ORTHO05D021914 2.4e-07 62.4 183 36.6
THA.LOC104809341 Tarenaya hassleriana HOM05D002129 ORTHO05D002188 2.4e-07 62.4 183 39.3
AT5G41790 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 5.3e-07 61.2 93 33.3
ECA233G6022 Erigeron canadensis HOM05D002129 ORTHO05D002188 5.3e-07 61.2 212 29.7
Potri.001G094200 Populus trichocarpa HOM05D002129 ORTHO05D002188 5.3e-07 61.2 1147 24.5
Sp7g00300 Schrenkiella parvula HOM05D002129 ORTHO05D002188 5.3e-07 61.2 183 36.6
HPP92_004589 Vanilla planifolia HOM05D034831 ORTHO05D026005 5.3e-07 61.2 256 24.6
BraA04t17139Z Brassica rapa HOM05D002129 ORTHO05D002188 7.0e-07 60.8 177 35.6
AT1G64330 Arabidopsis thaliana HOM05D002129 ORTHO05D002188 9.1e-07 60.5 93 34.4
BcaB06g27672 Brassica carinata HOM05D002129 ORTHO05D002188 9.1e-07 60.5 176 37.5
CAN.G792.47 Capsicum annuum HOM05D002129 ORTHO05D002188 9.1e-07 60.5 214 29.9
SalBow8G3978 Salvia bowleyana HOM05D002129 ORTHO05D002188 9.1e-07 60.5 308 26.6
PGSC0003DMG400005787 Solanum tuberosum HOM05D002129 ORTHO05D002188 9.1e-07 60.5 262 28.2
AL2G10610 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 1.2e-06 60.1 93 34.4
CAN.G532.94 Capsicum annuum HOM05D002129 ORTHO05D002188 1.2e-06 60.1 206 30.1
HanXRQChr02g0048241 Helianthus annuus HOM05D002129 ORTHO05D002188 1.2e-06 60.1 171 33.3
Sc07g0009960 Simmondsia chinensis HOM05D002129 ORTHO05D002188 1.2e-06 60.1 96 38.5
CsaV3_4G006410 Cucumis sativus L. HOM05D002129 ORTHO05D002188 1.6e-06 59.7 340 23.5
TAR374G0015 Trochodendron aralioides HOM05D002129 ORTHO05D002188 1.6e-06 59.7 269 27.5
arahy.Tifrunner.gnm1.ann1.X2XLI1 Arachis hypogaea HOM05D002129 ORTHO05D002188 2.0e-06 59.3 321 25.2
Phvul.002G296300 Phaseolus vulgaris HOM05D002129 ORTHO05D002188 2.0e-06 59.3 307 25.7
Prupe.5G115200 Prunus persica HOM05D002129 ORTHO05D002188 2.0e-06 59.3 348 23.9
AL2G10620 Arabidopsis lyrata HOM05D002129 ORTHO05D002188 2.7e-06 58.9 226 26.1
Ciclev10024006m.g Citrus clementina HOM05D002129 ORTHO05D002188 2.7e-06 58.9 278 24.5
Medtr8g099290 Medicago truncatula HOM05D002129 ORTHO05D002188 2.7e-06 58.9 682 24.3
Hund11405 Selenicereus undatus HOM05D002129 ORTHO05D002188 2.7e-06 58.9 129 33.3
AUR62019807 Chenopodium quinoa HOM05D002129 ORTHO05D002188 3.5e-06 58.5 224 26.3
A04p14960 Brassica napus HOM05D002129 ORTHO05D002188 4.5e-06 58.2 177 35.0
LjContig00312_ERROPOS870357g0010036 Lotus japonicus HOM05D002129 ORTHO05D002188 4.5e-06 58.2 327 25.1
GSVIVG01019499001 Vitis vinifera HOM05D002129 ORTHO05D002188 4.5e-06 58.2 300 26.0
MELO3C016309.2 Cucumis melo HOM05D002129 ORTHO05D002188 5.9e-06 57.8 330 24.2
Medtr8g099265 Medicago truncatula HOM05D002129 ORTHO05D002188 5.9e-06 57.8 322 25.5
Oeu042386.1 Olea europaea HOM05D002129 ORTHO05D002188 5.9e-06 57.8 312 26.6
Lalb_Chr05g0224241 Lupinus albus HOM05D002129 ORTHO05D002188 7.7e-06 57.4 844 21.8
Lalb_Chr05g0224251 Lupinus albus HOM05D002129 ORTHO05D002188 7.7e-06 57.4 338 24.3
Nitab4.5_0004161g0030 Nicotiana tabacum HOM05D002129 ORTHO05D002188 7.7e-06 57.4 238 26.1


User provided reference genes

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