Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2972 Papaver somniferum HOM05D000354 ORTHO05D000717 9.2e-147 523.5 253 100.0
PSO384G3784 Papaver somniferum HOM05D000354 ORTHO05D000717 3.7e-31 139.4 234 35.0
PSO384G4354 Papaver somniferum HOM05D000354 ORTHO05D000717 3.5e-29 132.9 225 37.3
PSO063G6926 Papaver somniferum HOM05D000354 ORTHO05D000717 1.0e-28 131.3 224 35.7
PSO063G3285 Papaver somniferum HOM05D000354 ORTHO05D000717 2.3e-28 130.2 227 35.2
PSO832G0032 Papaver somniferum HOM05D000354 ORTHO05D000717 1.5e-27 127.5 233 33.9
PSO732G0633 Papaver somniferum HOM05D000354 ORTHO05D000717 5.6e-27 125.6 208 35.6
PSO210G2076 Papaver somniferum HOM05D000354 ORTHO05D000717 9.5e-27 124.8 216 36.6
PSO384G3639 Papaver somniferum HOM05D000354 ORTHO05D000717 5.8e-24 115.5 215 34.4
PSO135G0524 Papaver somniferum HOM05D000354 ORTHO05D000717 4.3e-19 99.4 202 33.7
Sc13g0009740 Simmondsia chinensis HOM05D000354 ORTHO05D000717 1.2e-18 97.8 231 30.3
Nn1g01874 Nelumbo nucifera HOM05D000354 ORTHO05D000717 2.4e-17 93.6 123 40.7
Ciclev10006544m.g Citrus clementina HOM05D000354 ORTHO05D000717 1.5e-16 90.9 259 30.1
Sabra02G0142000 Salix brachista HOM05D000354 ORTHO05D000717 1.1e-14 84.7 247 30.0
Nn1g01875 Nelumbo nucifera HOM05D000354 ORTHO05D000717 3.2e-14 83.2 126 38.1
QL04p095668 Quercus lobata HOM05D000072 ORTHO05D000026 3.2e-14 83.2 152 35.5
Solyc01g095840.2 Solanum lycopersicum HOM05D000354 ORTHO05D000717 3.2e-14 83.2 235 30.2
Peaxi162Scf00550g00448 Petunia axillaris HOM05D000072 ORTHO05D000717 4.1e-14 82.8 235 26.4
Potri.002G170300 Populus trichocarpa HOM05D000354 ORTHO05D000717 5.4e-14 82.4 137 38.0
COL.COLO4_10701 Corchorus olitorius HOM05D000354 ORTHO05D000717 9.2e-14 81.6 132 34.1
PSO384G4076 Papaver somniferum HOM05D000354 ORTHO05D000717 9.2e-14 81.6 126 37.3
Nitab4.5_0002492g0020 Nicotiana tabacum HOM05D000354 ORTHO05D000717 1.6e-13 80.9 134 33.6
MELO3C008479.2 Cucumis melo HOM05D000354 ORTHO05D000717 2.1e-13 80.5 221 32.1
FvH4_5g04554 Fragaria vesca HOM05D000354 ORTHO05D000717 2.1e-13 80.5 137 34.3
CiPaw.06G009700 Carya illinoinensis HOM05D000354 ORTHO05D000717 3.5e-13 79.7 211 29.4
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 3.5e-13 79.7 123 38.2
PGSC0003DMG400010978 Solanum tuberosum HOM05D000354 ORTHO05D000717 3.5e-13 79.7 230 29.1
FAN13G0293 Fragaria x ananassa HOM05D000354 ORTHO05D000717 4.6e-13 79.3 190 30.5
Manes.06G159100 Manihot esculenta HOM05D000354 ORTHO05D000717 4.6e-13 79.3 134 34.3
Eucgr.E00055 Eucalyptus grandis HOM05D000354 ORTHO05D000717 6.0e-13 79.0 190 30.0
Manes.05G023400 Manihot esculenta HOM05D000354 ORTHO05D000717 7.8e-13 78.6 118 38.1
TAR375G0338 Trochodendron aralioides HOM05D000354 ORTHO05D000717 1.3e-12 77.8 126 36.5
Nn3g19019 Nelumbo nucifera HOM05D000354 ORTHO05D000717 2.3e-12 77.0 111 42.3
Potri.014G098200 Populus trichocarpa HOM05D000354 ORTHO05D000717 3.0e-12 76.6 164 31.7
FAN04G2368 Fragaria x ananassa HOM05D000354 ORTHO05D000717 5.1e-12 75.9 192 30.2
PSO135G0229 Papaver somniferum HOM05D000354 ORTHO05D000717 5.1e-12 75.9 179 32.4
TAR636G2385 Trochodendron aralioides HOM05D000354 ORTHO05D000717 5.1e-12 75.9 226 30.5
Haze_15650 Corylus avellana HOM05D000354 ORTHO05D000717 6.6e-12 75.5 127 37.0
Peaxi162Scf00786g00326 Petunia axillaris HOM05D000354 ORTHO05D000717 8.7e-12 75.1 126 33.3
QL04p095571 Quercus lobata HOM05D000072 ORTHO05D000026 8.7e-12 75.1 106 39.6
EL10Ac3g05305 Beta vulgaris HOM05D000354 ORTHO05D000717 1.1e-11 74.7 155 32.9
Prupe.2G187400 Prunus persica HOM05D000354 ORTHO05D000717 1.1e-11 74.7 228 29.8
QL09p009762 Quercus lobata HOM05D000072 ORTHO05D000026 1.1e-11 74.7 156 32.1
Lj1g0007890 Lotus japonicus HOM05D000354 ORTHO05D000717 1.9e-11 73.9 132 37.9
Solyc01g095860.3 Solanum lycopersicum HOM05D000354 ORTHO05D000717 1.9e-11 73.9 225 29.3
CsaV3_3G027950 Cucumis sativus L. HOM05D000354 ORTHO05D000717 2.5e-11 73.6 227 31.3
Glyma.16G025100 Glycine max HOM05D000354 ORTHO05D000717 2.5e-11 73.6 231 28.6
Lj1g0027362 Lotus japonicus HOM05D000354 ORTHO05D000717 2.5e-11 73.6 225 26.7
MD07G1148900 Malus domestica HOM05D000354 ORTHO05D000717 2.5e-11 73.6 148 36.5
PGSC0003DMG400000221 Solanum tuberosum HOM05D000354 ORTHO05D000717 2.5e-11 73.6 227 27.8
Cc02_g39280 Coffea canephora HOM05D000354 ORTHO05D000717 3.3e-11 73.2 141 34.0
Gohir.D11G014300 Gossypium hirsutum HOM05D000354 ORTHO05D000717 3.3e-11 73.2 228 30.3
Nitab4.5_0001715g0010 Nicotiana tabacum HOM05D000354 ORTHO05D000717 3.3e-11 73.2 164 29.3
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 5.6e-11 72.4 213 31.0
CiPaw.11G058500 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.6e-11 72.4 112 33.0
Gorai.007G014700 Gossypium raimondii HOM05D000354 ORTHO05D000717 5.6e-11 72.4 228 30.3
Sopen01g039600 Solanum pennellii HOM05D000354 ORTHO05D000717 5.6e-11 72.4 225 28.9
Peaxi162Scf00786g00327 Petunia axillaris HOM05D000354 ORTHO05D000717 7.3e-11 72.0 150 33.3
Prupe.5G119700 Prunus persica HOM05D000354 ORTHO05D000717 7.3e-11 72.0 126 35.7
Sopen01g039590 Solanum pennellii HOM05D000354 ORTHO05D000717 7.3e-11 72.0 193 29.0
EL10Ac3g05320 Beta vulgaris HOM05D000354 ORTHO05D000717 9.6e-11 71.6 239 25.5
Migut.E00865 Erythranthe guttata HOM05D000354 ORTHO05D000717 9.6e-11 71.6 136 34.6
FAN08G2372 Fragaria x ananassa HOM05D000354 ORTHO05D000717 9.6e-11 71.6 135 34.8
Peaxi162Scf00786g00328 Petunia axillaris HOM05D000354 ORTHO05D000717 9.6e-11 71.6 166 31.9
Duzib205G0576 Durio zibethinus HOM05D000354 ORTHO05D000717 1.2e-10 71.2 135 32.6
RcHm_v2.0_Chr1g0359361 Rosa chinensis HOM05D000354 ORTHO05D000717 1.2e-10 71.2 127 36.2
Haze_00180 Corylus avellana HOM05D000072 ORTHO05D000026 1.6e-10 70.9 129 35.7
RcHm_v2.0_Chr1g0325121 Rosa chinensis HOM05D000072 ORTHO05D000026 2.1e-10 70.5 115 37.4
FAN09G1268 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.6e-10 69.7 116 33.6
Lalb_Chr10g0100481 Lupinus albus HOM05D000354 ORTHO05D000717 3.6e-10 69.7 120 38.3
Sed0003501 Sechium edule HOM05D000354 ORTHO05D000717 3.6e-10 69.7 125 38.4
Gohir.A11G014100 Gossypium hirsutum HOM05D000354 ORTHO05D000717 4.7e-10 69.3 209 30.1
SGA_v2.0_scaffold43G16435 Striga asiatica HOM05D000072 ORTHO05D000026 4.7e-10 69.3 124 36.3
CiPaw.11G121600 Carya illinoinensis HOM05D000354 ORTHO05D000717 6.2e-10 68.9 123 32.5
Haze_00174 Corylus avellana HOM05D000072 ORTHO05D000026 6.2e-10 68.9 116 38.8
Phvul.009G054000 Phaseolus vulgaris HOM05D000354 ORTHO05D000717 6.2e-10 68.9 133 34.6
QL12p009880 Quercus lobata HOM05D000354 ORTHO05D010487 6.2e-10 68.9 132 34.1
QL12p010554 Quercus lobata HOM05D000354 ORTHO05D010487 6.2e-10 68.9 132 34.1
CSS0020324 Camellia sinensis var. sinensis HOM05D000354 ORTHO05D000717 8.1e-10 68.6 144 30.6
CSS0021311 Camellia sinensis var. sinensis HOM05D000354 ORTHO05D000717 8.1e-10 68.6 144 30.6
CANSAT21G2487 Cannabis sativa HOM05D000072 ORTHO05D000026 8.1e-10 68.6 132 34.1
Glyma.07G056200 Glycine max HOM05D000354 ORTHO05D000717 8.1e-10 68.6 231 26.8
QL02p030469 Quercus lobata HOM05D000354 ORTHO05D000717 8.1e-10 68.6 134 35.1
CiPaw.11G058600 Carya illinoinensis HOM05D000072 ORTHO05D000026 1.4e-09 67.8 97 35.1
FvH4_6g23840 Fragaria vesca HOM05D000072 ORTHO05D000026 1.4e-09 67.8 116 32.8
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 2.4e-09 67.0 193 30.1
Phvul.001G076200 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 3.1e-09 66.6 118 33.9
ClCG05G008830 Citrullus lanatus HOM05D000354 ORTHO05D000717 4.0e-09 66.2 211 28.4
QL07p000829 Quercus lobata HOM05D000072 ORTHO05D000026 4.0e-09 66.2 116 33.6
CiPaw.11G058900 Carya illinoinensis HOM05D000072 ORTHO05D000026 5.2e-09 65.9 107 32.7
Peaxi162Scf00450g00004 Petunia axillaris HOM05D000072 ORTHO05D000026 9.0e-09 65.1 73 45.2
QL09p009826 Quercus lobata HOM05D000072 ORTHO05D000026 9.0e-09 65.1 137 30.7
Sc25g0000840 Simmondsia chinensis HOM05D000354 ORTHO05D000717 9.0e-09 65.1 131 35.1
TPR.G4737 Trifolium pratense HOM05D000354 ORTHO05D000717 9.0e-09 65.1 233 28.3
Haze_00873 Corylus avellana HOM05D000072 ORTHO05D000026 1.2e-08 64.7 119 35.3
Migut.E01745 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.2e-08 64.7 108 34.3
VMungo0647G0622 Vigna mungo HOM05D000072 ORTHO05D000026 1.2e-08 64.7 123 34.1
GSVIVG01005786001 Vitis vinifera HOM05D000354 ORTHO05D000717 1.2e-08 64.7 129 34.9
EL10Ac5g12914 Beta vulgaris HOM05D000354 ORTHO05D000717 1.5e-08 64.3 129 35.7
Migut.C00057 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.5e-08 64.3 98 38.8
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.5e-08 64.3 93 41.9
Cc02_g01710 Coffea canephora HOM05D000354 ORTHO05D000717 2.6e-08 63.5 117 32.5
Migut.E01610 Erythranthe guttata HOM05D000072 ORTHO05D000026 3.4e-08 63.2 137 32.1
FvH4_6g52680 Fragaria vesca HOM05D000072 ORTHO05D000026 3.4e-08 63.2 132 31.8
FAN14G2861 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.4e-08 63.2 131 32.8
Potri.003G139900 Populus trichocarpa HOM05D000354 ORTHO05D000717 5.8e-08 62.4 145 30.3
QL09p010101 Quercus lobata HOM05D000072 ORTHO05D000026 5.8e-08 62.4 89 38.2
Sabra14G0072000 Salix brachista HOM05D000354 ORTHO05D000717 5.8e-08 62.4 126 31.7
Cpa.g.sc12.92 Carica papaya HOM05D000354 ORTHO05D000717 7.6e-08 62.0 125 29.6
PGR031G3913 Punica granatum HOM05D000354 ORTHO05D000717 7.6e-08 62.0 191 27.2
QL09p010147 Quercus lobata HOM05D000072 ORTHO05D000026 7.6e-08 62.0 100 34.0
TWI23G0685 Tripterygium wilfordii HOM05D000354 ORTHO05D000717 7.6e-08 62.0 104 35.6
Cfa012015 Carpinus fangiana HOM05D000354 ORTHO05D000717 9.9e-08 61.6 109 31.2
Migut.E01611 Erythranthe guttata HOM05D000354 ORTHO05D000717 9.9e-08 61.6 100 36.0
Peaxi162Scf00218g00726 Petunia axillaris HOM05D000354 ORTHO05D000717 9.9e-08 61.6 152 30.9
AUR62004486 Chenopodium quinoa HOM05D000354 ORTHO05D000717 1.3e-07 61.2 245 24.1
Haze_09054 Corylus avellana HOM05D000354 ORTHO05D000717 1.3e-07 61.2 131 30.5
Lsat_1_v5_gn_8_99681 Lactuca sativa HOM05D000354 ORTHO05D000717 1.7e-07 60.8 206 28.2
CAN.G809.89 Capsicum annuum HOM05D000072 ORTHO05D000026 2.2e-07 60.5 70 41.4
Prupe.5G119000 Prunus persica HOM05D000354 ORTHO05D000717 2.2e-07 60.5 121 36.4
Sabra10G0090900 Salix brachista HOM05D000260 ORTHO05D004405 2.2e-07 60.5 136 34.6
Cpa.g.sc3.63 Carica papaya HOM05D000354 ORTHO05D000717 2.9e-07 60.1 125 32.0
AUR62019359 Chenopodium quinoa HOM05D000354 ORTHO05D000717 2.9e-07 60.1 246 25.6
Migut.E01724 Erythranthe guttata HOM05D000072 ORTHO05D000026 2.9e-07 60.1 100 36.0
Phvul.001G075500 Phaseolus vulgaris HOM05D000072 ORTHO05D000026 2.9e-07 60.1 133 29.3
CSS0046051 Camellia sinensis var. sinensis HOM05D000072 ORTHO05D000026 3.8e-07 59.7 204 27.9
Migut.E01743 Erythranthe guttata HOM05D000354 ORTHO05D000717 3.8e-07 59.7 100 35.0
Migut.E01758 Erythranthe guttata HOM05D000072 ORTHO05D000026 3.8e-07 59.7 100 35.0
Lj3C364T1 Lonicera japonica HOM05D000354 ORTHO05D000717 3.8e-07 59.7 117 31.6
QL04p061142 Quercus lobata HOM05D000354 ORTHO05D000717 3.8e-07 59.7 102 35.3
arahy.Tifrunner.gnm1.ann1.4S7D56 Arachis hypogaea HOM05D000354 ORTHO05D000717 4.9e-07 59.3 145 31.0
CANSAT80G2569 Cannabis sativa HOM05D000072 ORTHO05D000026 4.9e-07 59.3 117 28.2
Glyma.14G118700 Glycine max HOM05D000072 ORTHO05D000026 4.9e-07 59.3 115 33.0
Nitab4.5_0000108g0070 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.9e-07 59.3 72 41.7
Nitab4.5_0003580g0030 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.9e-07 59.3 72 41.7
CANSAT21G0138 Cannabis sativa HOM05D000072 ORTHO05D000026 6.4e-07 58.9 90 40.0
CANSAT21G1813 Cannabis sativa HOM05D000072 ORTHO05D000026 6.4e-07 58.9 104 36.5
Migut.E01730 Erythranthe guttata HOM05D000072 ORTHO05D000026 6.4e-07 58.9 110 34.5
FvH4_6g01501 Fragaria vesca HOM05D000354 ORTHO05D000717 6.4e-07 58.9 110 30.0
Lj3C344T9 Lonicera japonica HOM05D000354 ORTHO05D000717 6.4e-07 58.9 131 32.1
RcHm_v2.0_Chr3g0449391 Rosa chinensis HOM05D000072 ORTHO05D000026 6.4e-07 58.9 109 28.4
CiPaw.05G197200 Carya illinoinensis HOM05D000072 ORTHO05D000026 8.4e-07 58.5 124 31.5
Migut.E00873 Erythranthe guttata HOM05D000072 ORTHO05D000026 8.4e-07 58.5 82 36.6
Migut.E00875 Erythranthe guttata HOM05D000072 ORTHO05D000026 8.4e-07 58.5 115 30.4
Eucgr.D01736 Eucalyptus grandis HOM05D000354 ORTHO05D000717 8.4e-07 58.5 130 29.2
PSO135G0814 Papaver somniferum HOM05D000354 ORTHO05D000717 8.4e-07 58.5 226 26.1
Peaxi162Scf00344g00182 Petunia axillaris HOM05D000072 ORTHO05D000026 8.4e-07 58.5 70 42.9
arahy.Tifrunner.gnm1.ann1.4LNU01 Arachis hypogaea HOM05D000354 ORTHO05D000717 1.1e-06 58.2 145 31.0
Migut.E01703 Erythranthe guttata HOM05D000072 ORTHO05D000026 1.4e-06 57.8 100 34.0
HanXRQChr08g0213471 Helianthus annuus HOM05D000260 ORTHO05D004405 1.4e-06 57.8 91 38.5
Lsat_1_v5_gn_7_1260 Lactuca sativa HOM05D000354 ORTHO05D000717 1.4e-06 57.8 135 30.4
Lj3A373G13 Lonicera japonica HOM05D000072 ORTHO05D000717 1.4e-06 57.8 105 31.4
Lj3C352G3 Lonicera japonica HOM05D000072 ORTHO05D000026 1.4e-06 57.8 105 31.4
vmacro06551 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 1.4e-06 57.8 104 34.6
Lj3C371G2 Lonicera japonica HOM05D000354 ORTHO05D000717 1.9e-06 57.4 130 28.5
MD02G1251000 Malus domestica HOM05D000072 ORTHO05D000026 1.9e-06 57.4 135 33.3
MD02G1252000 Malus domestica HOM05D000072 ORTHO05D000026 1.9e-06 57.4 132 33.3
RcHm_v2.0_Chr3g0449371 Rosa chinensis HOM05D000072 ORTHO05D000026 1.9e-06 57.4 104 29.8
DCAR_007991 Daucus carota HOM05D000072 ORTHO05D000026 2.4e-06 57.0 84 38.1
ECA233G2904 Erigeron canadensis HOM05D000324 ORTHO05D001014 2.4e-06 57.0 117 31.6
Glyma.19G069400 Glycine max HOM05D000072 ORTHO05D000026 2.4e-06 57.0 139 28.1
Lj3C370T3 Lonicera japonica HOM05D000072 ORTHO05D000026 2.4e-06 57.0 122 31.1
Rhsim10G0165400 Rhododendron simsii HOM05D000072 ORTHO05D000026 3.2e-06 56.6 98 39.8
Solyc02g081480.4 Solanum lycopersicum HOM05D000072 ORTHO05D000026 3.2e-06 56.6 105 38.1
Migut.E01753 Erythranthe guttata HOM05D000072 ORTHO05D000026 4.2e-06 56.2 127 29.1
FAN08G1855 Fragaria x ananassa HOM05D000354 ORTHO05D000717 4.2e-06 56.2 76 36.8
FAN14G3543 Fragaria x ananassa HOM05D000072 ORTHO05D000026 4.2e-06 56.2 106 28.3
Lj1g0015877 Lotus japonicus HOM05D000072 ORTHO05D000026 4.2e-06 56.2 98 33.7
Ciclev10023976m.g Citrus clementina HOM05D000354 ORTHO05D000717 5.4e-06 55.8 95 33.7
Eucgr.E00861 Eucalyptus grandis HOM05D000354 ORTHO05D000717 5.4e-06 55.8 96 35.4
Potri.001G154500 Populus trichocarpa HOM05D000354 ORTHO05D010487 5.4e-06 55.8 86 37.2
Actinidia20131 Actinidia chinensis HOM05D000354 ORTHO05D010487 7.1e-06 55.5 124 30.6
Oeu007899.1 Olea europaea HOM05D000354 ORTHO05D000717 7.1e-06 55.5 213 27.2
Prupe.6G142200 Prunus persica HOM05D000072 ORTHO05D000026 9.3e-06 55.1 148 28.4


User provided reference genes

Program Settings