Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 5.6e-206 720.7 364 100.0
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 8.4e-202 706.8 364 98.1
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 7.5e-150 534.3 362 72.9
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 9.8e-150 533.9 363 73.6
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 1.1e-148 530.4 364 73.4
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 2.0e-147 526.2 358 72.9
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 8.6e-146 520.8 358 71.5
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 7.3e-145 517.7 362 71.5
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 4.7e-144 515.0 359 71.6
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 8.0e-144 514.2 359 71.9
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 1.8e-143 513.1 359 71.9
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 2.3e-143 512.7 405 64.4
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 5.2e-143 511.5 359 71.0
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.5e-142 510.0 365 71.5
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 2.6e-142 509.2 364 70.3
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 4.4e-142 508.4 362 72.1
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 3.7e-141 505.4 367 70.3
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 1.4e-140 503.4 356 73.0
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.9e-140 503.1 362 71.3
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 3.2e-140 502.3 359 70.8
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 5.4e-140 501.5 410 64.4
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 7.0e-140 501.1 358 70.1
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.2e-139 500.4 418 62.9
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 1.2e-139 500.4 343 72.6
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 1.6e-139 500.0 344 72.1
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.0e-139 498.0 363 69.7
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.0e-139 498.0 363 69.4
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 1.3e-138 496.9 390 65.9
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.7e-138 496.5 363 69.4
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 3.0e-138 495.7 380 67.1
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 6.6e-138 494.6 364 69.2
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 1.1e-137 493.8 354 69.8
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 1.5e-137 493.4 364 68.7
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 7.3e-137 491.1 365 68.8
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 7.3e-137 491.1 396 64.9
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.8e-136 489.2 358 69.6
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.1e-135 487.3 354 67.2
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 2.3e-135 486.1 349 71.1
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 2.3e-135 486.1 358 68.2
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 3.1e-135 485.7 405 63.2
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 3.4e-134 482.3 412 62.1
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 4.4e-134 481.9 354 68.1
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 1.3e-133 480.3 359 68.2
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 3.7e-133 478.8 321 73.2
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 6.4e-133 478.0 459 57.1
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 8.3e-133 477.6 412 61.7
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 1.1e-132 477.2 354 68.1
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.1e-132 477.2 361 68.1
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.9e-132 476.5 355 67.9
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 5.4e-132 474.9 369 65.9
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 7.0e-132 474.6 370 65.9
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 7.0e-132 474.6 325 72.3
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.6e-131 473.4 360 67.5
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 4.6e-131 471.9 325 71.7
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 1.7e-130 469.9 342 67.8
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 2.3e-130 469.5 368 64.4
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 6.6e-130 468.0 355 65.1
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 9.5e-129 464.2 358 65.6
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 1.2e-128 463.8 411 59.9
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 4.7e-128 461.8 354 66.9
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 8.1e-128 461.1 358 64.8
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 1.4e-127 460.3 399 61.2
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 3.1e-127 459.1 411 59.1
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 3.1e-127 459.1 384 62.0
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 5.2e-127 458.4 397 61.5
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 8.9e-127 457.6 336 67.9
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 4.4e-126 455.3 405 61.0
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 7.5e-126 454.5 382 63.4
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 7.5e-126 454.5 386 61.1
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 9.9e-126 454.1 361 64.8
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 1.3e-125 453.8 401 59.9
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.7e-125 453.4 342 66.7
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 3.7e-125 452.2 402 60.2
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 4.9e-125 451.8 342 65.8
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 6.4e-125 451.4 407 60.0
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 8.3e-125 451.1 413 58.6
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 1.9e-124 449.9 402 60.2
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 2.4e-124 449.5 330 68.8
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 3.2e-124 449.1 336 68.2
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 4.1e-124 448.7 408 59.8
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 2.7e-123 446.0 399 59.9
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 2.7e-123 446.0 399 59.9
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 6.0e-123 444.9 424 57.8
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 6.0e-123 444.9 377 59.7
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.7e-122 443.4 342 65.5
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.7e-122 443.4 334 67.4
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 8.6e-122 441.0 370 61.1
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 3.3e-121 439.1 449 55.2
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 5.6e-121 438.3 310 71.9
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 2.8e-120 436.0 374 61.8
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 4.0e-119 432.2 375 61.3
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 3.5e-115 419.1 368 60.9
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 2.5e-113 412.9 354 60.5
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 1.8e-111 406.8 368 59.8
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 9.9e-110 401.0 358 59.8
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 9.9e-110 401.0 363 58.4
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 1.3e-109 400.6 403 56.6
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 2.9e-109 399.4 368 59.5
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 2.9e-109 399.4 358 59.8
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 4.9e-109 398.7 354 59.9
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 8.7e-106 387.9 346 60.1
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.5e-105 387.1 346 59.8
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.5e-105 386.3 346 59.8
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 2.1e-104 383.3 346 59.5
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 4.8e-104 382.1 346 59.2
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 2.4e-103 379.8 298 65.4
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 2.4e-103 379.8 298 65.4
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 5.8e-102 375.2 314 59.9
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 7.4e-97 358.2 365 53.2
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 2.6e-94 349.7 270 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 7.6e-94 348.2 367 50.7
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 3.1e-87 326.2 213 75.1
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 1.0e-82 311.2 311 50.8
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 3.7e-80 302.8 216 69.4
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.2e-77 293.5 369 48.2
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 1.9e-76 290.4 214 66.4
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.8e-72 276.6 214 64.5
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 5.0e-61 239.2 255 53.7
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 7.4e-57 225.3 394 36.8
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 7.7e-54 215.3 157 69.4
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.0e-53 214.9 150 69.3
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 1.2e-51 208.0 126 83.3
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.2e-45 187.2 148 64.9
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-44 184.9 128 71.1
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.7e-43 180.3 158 58.2
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 6.3e-40 169.1 115 72.2
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 2.5e-28 130.6 79 78.5
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.9e-23 114.4 147 46.3
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 1.2e-22 111.7 73 78.1
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 9.2e-15 85.5 66 60.6
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 6.6e-13 79.3 424 21.9
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 4.7e-11 73.2 72 51.4
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 4.0e-10 70.1 59 64.4
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 8.9e-10 68.9 53 62.3


User provided reference genes

Program Settings