Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2831 Papaver somniferum HOM05D004499 ORTHO05D004928 1.1e-141 506.9 300 100.0
PSO339G1230 Papaver somniferum HOM05D004499 ORTHO05D004928 8.2e-102 374.4 311 75.2
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 1.3e-22 111.3 323 34.7
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 6.0e-20 102.4 330 35.5
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 1.0e-19 101.7 311 33.4
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 3.9e-19 99.8 301 37.2
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 8.7e-19 98.6 333 33.3
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 1.5e-18 97.8 328 36.0
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 9.6e-18 95.1 340 32.9
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 1.3e-17 94.7 296 33.1
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 1.3e-17 94.7 333 32.1
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.1e-17 94.0 323 32.8
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 3.6e-17 93.2 306 34.0
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 1.1e-16 91.7 334 33.2
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 1.1e-16 91.7 344 32.3
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 2.4e-16 90.5 308 32.8
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 9.0e-16 88.6 316 33.5
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 2.0e-15 87.4 294 36.1
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 2.0e-15 87.4 287 35.5
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 2.6e-15 87.0 291 33.7
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 3.4e-15 86.7 184 42.9
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 3.4e-15 86.7 291 33.7
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 3.4e-15 86.7 219 34.7
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 3.4e-15 86.7 289 33.2
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 3.4e-15 86.7 333 33.3
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 5.8e-15 85.9 332 31.6
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.3e-14 84.7 318 33.6
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 1.3e-14 84.7 330 32.1
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 1.3e-14 84.7 220 36.4
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 1.3e-14 84.7 220 36.4
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 1.7e-14 84.3 317 32.8
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 2.2e-14 84.0 218 36.2
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 2.2e-14 84.0 218 36.2
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 2.9e-14 83.6 318 33.3
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 3.8e-14 83.2 344 32.8
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 3.8e-14 83.2 326 33.1
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 4.9e-14 82.8 301 33.2
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 4.9e-14 82.8 325 31.1
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 4.9e-14 82.8 218 35.8
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 8.4e-14 82.0 311 34.4
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 8.4e-14 82.0 219 36.1
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 8.4e-14 82.0 219 36.1
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 1.1e-13 81.6 305 31.8
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 1.1e-13 81.6 306 32.4
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.4e-13 81.3 331 31.4
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 1.4e-13 81.3 285 34.0
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 1.4e-13 81.3 318 31.8
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.9e-13 80.9 337 30.9
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 2.4e-13 80.5 326 31.3
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 2.4e-13 80.5 347 30.8
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 3.2e-13 80.1 300 32.0
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 3.2e-13 80.1 303 32.3
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 4.2e-13 79.7 338 30.2
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 5.4e-13 79.3 277 31.0
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 7.1e-13 79.0 338 30.2
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 7.1e-13 79.0 338 30.2
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 7.1e-13 79.0 327 30.3
Manes.08G004906 Manihot esculenta HOM05D004499 ORTHO05D004928 9.3e-13 78.6 192 37.5
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 1.2e-12 78.2 333 31.8
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 1.2e-12 78.2 337 30.3
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 1.6e-12 77.8 308 31.2
Aa31LG5G22320 Aethionema arabicum HOM05D004499 ORTHO05D004928 2.1e-12 77.4 282 35.8
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 3.5e-12 76.6 324 31.8
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 4.6e-12 76.3 275 34.5
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 4.6e-12 76.3 307 31.6
MELO3C014257.2 Cucumis melo HOM05D004499 ORTHO05D004928 7.9e-12 75.5 301 28.9
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 1.3e-11 74.7 307 33.6
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 1.3e-11 74.7 332 31.9
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 1.8e-11 74.3 317 29.7
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 1.8e-11 74.3 325 31.4
SGA_v2.0_scaffold126G33909 Striga asiatica HOM05D004499 ORTHO05D004928 1.8e-11 74.3 300 27.3
Manes.12G048251 Manihot esculenta HOM05D004499 ORTHO05D004928 2.3e-11 73.9 192 36.5
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 2.3e-11 73.9 290 33.4
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 3.0e-11 73.6 291 31.3
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 5.1e-11 72.8 303 32.3
Manes.05G197001 Manihot esculenta HOM05D004499 ORTHO05D004928 6.7e-11 72.4 192 36.5
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 8.7e-11 72.0 332 31.6
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 8.7e-11 72.0 310 30.0
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 1.5e-10 71.2 302 29.8
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 1.5e-10 71.2 312 29.2
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.9e-10 70.9 330 28.2
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 2.5e-10 70.5 348 30.5
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 2.5e-10 70.5 333 29.4
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 2.5e-10 70.5 311 28.9
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 3.3e-10 70.1 310 32.9
ClCG04G008860 Citrullus lanatus HOM05D004499 ORTHO05D004928 3.3e-10 70.1 274 31.0
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 5.6e-10 69.3 294 31.3
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 5.6e-10 69.3 335 31.6
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 9.6e-10 68.6 237 33.8
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 9.6e-10 68.6 309 27.8
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 9.6e-10 68.6 303 31.0
COL.COLO4_27061 Corchorus olitorius HOM05D004499 ORTHO05D004928 1.3e-09 68.2 86 44.2
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 2.1e-09 67.4 328 33.2
Peaxi162Scf00005g04016 Petunia axillaris HOM05D004499 ORTHO05D004928 2.1e-09 67.4 145 38.6
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 2.8e-09 67.0 293 30.0
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 4.8e-09 66.2 286 29.7
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 4.8e-09 66.2 286 29.7
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 4.8e-09 66.2 326 28.5
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 4.8e-09 66.2 347 31.1
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 6.2e-09 65.9 230 34.3
Manes.05G197300 Manihot esculenta HOM05D004499 ORTHO05D004928 8.1e-09 65.5 231 31.2
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 8.1e-09 65.5 291 30.6
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 1.1e-08 65.1 285 28.8
CsaV3_6G039360 Cucumis sativus L. HOM05D004499 ORTHO05D004928 1.1e-08 65.1 281 29.9
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 1.1e-08 65.1 374 27.5
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 2.4e-08 63.9 346 29.8
HanXRQChr02g0051991 Helianthus annuus HOM05D004499 ORTHO05D004928 2.4e-08 63.9 85 50.6
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 3.1e-08 63.5 196 34.7
Gohir.D04G114901 Gossypium hirsutum HOM05D004499 ORTHO05D004928 5.3e-08 62.8 170 32.4
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 9.0e-08 62.0 281 31.7
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 9.0e-08 62.0 296 28.7
AT2G37100 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 1.5e-07 61.2 296 32.4
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 2.0e-07 60.8 337 29.7
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 2.6e-07 60.5 246 33.7
MD12G1122400 Malus domestica HOM05D004499 ORTHO05D004928 2.6e-07 60.5 207 29.0
TPR.G36959 Trifolium pratense HOM05D004499 ORTHO05D004928 4.5e-07 59.7 74 47.3
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 5.8e-07 59.3 304 29.9
Carub.0004s1899 Capsella rubella HOM05D004499 ORTHO05D004928 7.6e-07 58.9 292 33.6
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 7.6e-07 58.9 294 29.9
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 7.6e-07 58.9 278 29.9
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 7.6e-07 58.9 164 41.5
Sc02g0001920 Simmondsia chinensis HOM05D004499 ORTHO05D004928 1.3e-06 58.2 211 31.8
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 2.2e-06 57.4 281 29.9
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 3.8e-06 56.6 280 27.5
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 4.9e-06 56.2 360 26.7
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 4.9e-06 56.2 305 31.5
Sed0011318 Sechium edule HOM05D004499 ORTHO05D004928 4.9e-06 56.2 211 28.4
SHI12538 Sapria himalayana HOM05D004499 ORTHO05D004928 8.4e-06 55.5 299 28.4


User provided reference genes

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