Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2791 Papaver somniferum HOM05D004778 ORTHO05D005679 1.7e-19 98.6 60 100.0
PSO339G4337 Papaver somniferum HOM05D004778 ORTHO05D005679 6.6e-19 96.7 60 98.3
PSO339G1550 Papaver somniferum HOM05D004778 ORTHO05D005679 1.4e-16 89.0 60 90.0
PSO339G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 4.9e-14 80.5 60 85.0
PSO384G3395 Papaver somniferum HOM05D004778 ORTHO05D005679 2.4e-13 78.2 60 80.0
PSO339G3914 Papaver somniferum HOM05D004778 ORTHO05D005679 7.8e-12 73.2 61 73.8
Aqoxy1G00473 Aquilegia oxysepala HOM05D004778 ORTHO05D005679 3.0e-11 71.2 60 68.3
Hma1.2p1_0152F.1_g067660 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 6.6e-11 70.1 60 70.0
Potri.013G057500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.5e-10 68.9 58 69.0
Potri.019G035500 Populus trichocarpa HOM05D004778 ORTHO05D005679 1.9e-10 68.6 60 68.3
PSO339G2985 Papaver somniferum HOM05D004778 ORTHO05D005679 2.5e-10 68.2 59 71.2
Duzib177G0058 Durio zibethinus HOM05D004778 ORTHO05D005679 3.3e-10 67.8 60 66.7
PSO384G3806 Papaver somniferum HOM05D004778 ORTHO05D005679 4.3e-10 67.4 59 69.5
Thecc.05G250100 Theobroma cacao HOM05D004778 ORTHO05D005679 7.3e-10 66.6 60 66.7
Duzib106G0337 Durio zibethinus HOM05D004778 ORTHO05D005679 1.2e-09 65.9 60 66.7
CANSAT78G1478 Cannabis sativa HOM05D004778 ORTHO05D005679 1.6e-09 65.5 60 68.3
Duzib106G1560 Durio zibethinus HOM05D004778 ORTHO05D005679 2.1e-09 65.1 60 66.7
Manes.09G140700 Manihot esculenta HOM05D004778 ORTHO05D005679 3.6e-09 64.3 60 65.0
Nn2g15855 Nelumbo nucifera HOM05D004778 ORTHO05D005679 3.6e-09 64.3 60 65.0
TAR633G1575 Trochodendron aralioides HOM05D004778 ORTHO05D005679 3.6e-09 64.3 60 61.7
Cfa001534 Carpinus fangiana HOM05D004778 ORTHO05D005679 4.7e-09 63.9 61 65.6
Duzib128G0115 Durio zibethinus HOM05D004778 ORTHO05D005679 6.2e-09 63.5 60 63.3
Manes.08G144900 Manihot esculenta HOM05D004778 ORTHO05D005679 8.1e-09 63.2 58 63.8
Sabra19G0043900 Salix brachista HOM05D004778 ORTHO05D005679 1.4e-08 62.4 61 63.9
Sabra19G0047200 Salix brachista HOM05D004778 ORTHO05D005679 1.4e-08 62.4 61 63.9
TAR623G1546 Trochodendron aralioides HOM05D004778 ORTHO05D005679 1.8e-08 62.0 60 58.3
Gohir.D11G246400 Gossypium hirsutum HOM05D004778 ORTHO05D005679 2.3e-08 61.6 60 61.7
TWI32G0653 Tripterygium wilfordii HOM05D004778 ORTHO05D005679 3.1e-08 61.2 60 60.0
Hma1.2p1_0589F.1_g184910 Hydrangea macrophylla HOM05D004778 ORTHO05D005679 1.2e-07 59.3 60 60.0
AL7G26630 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 3.4e-07 57.8 60 60.0
AT4G26320 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 3.4e-07 57.8 60 60.0
AT3G13520 Arabidopsis thaliana HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 60.7
PGR142G3834 Punica granatum HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 62.3
Rhsim13G0232700 Rhododendron simsii HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 59.0
PGSC0003DMG400008381 Solanum tuberosum HOM05D004778 ORTHO05D005679 7.6e-07 56.6 61 60.7
Eucgr.K01501 Eucalyptus grandis HOM05D004778 ORTHO05D005679 9.9e-07 56.2 57 64.9
Gohir.A13G099600 Gossypium hirsutum HOM05D004778 ORTHO05D005679 9.9e-07 56.2 60 58.3
A01p17570 Brassica napus HOM05D004778 ORTHO05D005679 1.7e-06 55.5 60 56.7
BraA01t01710Z Brassica rapa HOM05D004778 ORTHO05D005679 1.7e-06 55.5 60 56.7
Cpa.g.sc119.43 Carica papaya HOM05D004778 ORTHO05D005679 1.7e-06 55.5 60 58.3
Carub.0008s1702 Capsella rubella HOM05D004778 ORTHO05D005679 2.2e-06 55.1 61 59.0
CARHR233890 Cardamine hirsuta HOM05D004778 ORTHO05D005679 2.2e-06 55.1 60 56.7
COL.COLO4_36083 Corchorus olitorius HOM05D004778 ORTHO05D005679 2.2e-06 55.1 62 59.7
C07p54800 Brassica napus HOM05D004778 ORTHO05D005679 2.9e-06 54.7 60 56.7
BcaC06g32759 Brassica carinata HOM05D004778 ORTHO05D005679 3.7e-06 54.3 60 55.0
BcaNung02429 Brassica carinata HOM05D004778 ORTHO05D005679 3.7e-06 54.3 60 53.3
A03p56600 Brassica napus HOM05D004778 ORTHO05D005679 3.7e-06 54.3 60 55.0
PGSC0003DMG400032211 Solanum tuberosum HOM05D004778 ORTHO05D005679 3.7e-06 54.3 58 56.9
BcaC09g50690 Brassica carinata HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 56.7
C01p22170 Brassica napus HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 56.7
BolC1t02147H Brassica oleracea HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 56.7
BolC7t45969H Brassica oleracea HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 55.0
Thhalv10027232m.g Eutrema salsugineum HOM05D004778 ORTHO05D005679 4.9e-06 53.9 60 53.3
MD03G1004000 Malus domestica HOM05D004778 ORTHO05D005679 4.9e-06 53.9 61 57.4
Aa31LG3G12430 Aethionema arabicum HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 55.7
AL3G25430 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 57.4
Carub.0007s1462 Capsella rubella HOM05D004778 ORTHO05D005679 6.4e-06 53.5 60 53.3
Prupe.6G003500 Prunus persica HOM05D004778 ORTHO05D005679 6.4e-06 53.5 61 59.0
AL8G32300 Arabidopsis lyrata HOM05D004778 ORTHO05D005679 8.4e-06 53.1 61 55.7
BcaNung06233 Brassica carinata HOM05D004778 ORTHO05D005679 8.4e-06 53.1 62 56.5
BolC5t34103H Brassica oleracea HOM05D004778 ORTHO05D005679 8.4e-06 53.1 62 56.5


User provided reference genes

Program Settings