Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2775 Papaver somniferum HOM05D004682 ORTHO05D006197 3.0e-99 365.2 183 100.0
PSO407G0071 Papaver somniferum HOM05D004682 ORTHO05D006197 8.0e-84 313.9 165 95.8
PSO170G5080 Papaver somniferum HOM05D004682 ORTHO05D006197 1.0e-83 313.5 165 95.8
TAR633G2734 Trochodendron aralioides HOM05D004682 ORTHO05D006197 4.7e-60 235.0 165 71.5
Atru.chr5.1294 Acer truncatum HOM05D004682 ORTHO05D006197 3.1e-59 232.3 165 70.9
Aqoxy2G03153 Aquilegia oxysepala HOM05D004682 ORTHO05D006197 3.1e-59 232.3 165 69.1
Hma1.2p1_0399F.1_g144320 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 4.0e-59 231.9 164 69.5
Hma1.2p1_1049F.1_g251880 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 4.0e-59 231.9 164 69.5
Hma1.2p1_0399F.1_g144330 Hydrangea macrophylla HOM05D004682 ORTHO05D006197 1.5e-58 229.9 162 69.8
Nn3g21239 Nelumbo nucifera HOM05D004682 ORTHO05D006197 3.4e-58 228.8 165 72.1
Actinidia00705 Actinidia chinensis HOM05D004682 ORTHO05D006197 4.4e-58 228.4 165 67.3
CiPaw.07G098500 Carya illinoinensis HOM05D004682 ORTHO05D006197 7.5e-58 227.6 165 69.7
Dinv32984 Davidia involucrata HOM05D004682 ORTHO05D006197 1.3e-57 226.9 165 69.7
QL12p023612 Quercus lobata HOM05D004682 ORTHO05D006197 2.9e-57 225.7 165 69.7
QL12p023658 Quercus lobata HOM05D004682 ORTHO05D006197 1.1e-56 223.8 165 69.1
GSVIVG01011020001 Vitis vinifera HOM05D004682 ORTHO05D006197 1.9e-56 223.0 165 67.3
CANSAT25G1381 Cannabis sativa HOM05D004682 ORTHO05D006197 3.2e-56 222.2 165 65.5
Sc17g0003630 Simmondsia chinensis HOM05D004682 ORTHO05D006197 3.2e-56 222.2 166 67.5
Haze_04797 Corylus avellana HOM05D004682 ORTHO05D006197 2.1e-55 219.5 165 69.1
Eucgr.K03425 Eucalyptus grandis HOM05D004682 ORTHO05D006197 2.1e-55 219.5 164 65.2
Glyma.03G207600 Glycine max HOM05D004682 ORTHO05D006197 2.1e-55 219.5 165 65.5
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 2.7e-55 219.2 165 69.1
Thecc.01G288600 Theobroma cacao HOM05D004682 ORTHO05D006197 4.6e-55 218.4 165 67.3
TPR.G32282 Trifolium pratense HOM05D004682 ORTHO05D006197 4.6e-55 218.4 165 64.8
Duzib138G0788 Durio zibethinus HOM05D004682 ORTHO05D006197 6.0e-55 218.0 165 67.3
Gohir.A11G118700 Gossypium hirsutum HOM05D004682 ORTHO05D006197 6.0e-55 218.0 165 66.7
Gohir.D11G123600 Gossypium hirsutum HOM05D004682 ORTHO05D006197 6.0e-55 218.0 165 66.7
SalBow3G2371 Salvia bowleyana HOM05D004682 ORTHO05D006197 6.0e-55 218.0 165 64.2
TWI59G0906 Tripterygium wilfordii HOM05D004682 ORTHO05D006197 6.0e-55 218.0 165 66.1
MSTRG.18200 Avicennia marina HOM05D004682 ORTHO05D006197 1.7e-54 216.5 165 63.6
Gorai.007G132500 Gossypium raimondii HOM05D004682 ORTHO05D006197 1.7e-54 216.5 165 66.1
Psat3g025520 Pisum sativum HOM05D004682 ORTHO05D006197 1.7e-54 216.5 165 64.8
CSS0044691 Camellia sinensis var. sinensis HOM05D004682 ORTHO05D006197 3.0e-54 215.7 165 63.6
Oeu002696.1 Olea europaea HOM05D004682 ORTHO05D006197 3.0e-54 215.7 165 66.1
Ciclev10018593m.g Citrus clementina HOM05D004682 ORTHO05D006197 3.9e-54 215.3 165 64.2
DCAR_018370 Daucus carota HOM05D004682 ORTHO05D006197 5.1e-54 214.9 164 66.5
THA.LOC104817537 Tarenaya hassleriana HOM05D004682 ORTHO05D006197 5.1e-54 214.9 164 65.2
arahy.Tifrunner.gnm1.ann1.BJ6WT1 Arachis hypogaea HOM05D004682 ORTHO05D006197 8.6e-54 214.2 165 64.8
Migut.D00237 Erythranthe guttata HOM05D004682 ORTHO05D006197 1.1e-53 213.8 165 62.4
MBI19_g27957_MAGBIO Magnolia biondii HOM05D004682 ORTHO05D006197 1.1e-53 213.8 164 66.5
vmacro02515 Vaccinium macrocarpon HOM05D004682 ORTHO05D006197 1.1e-53 213.8 153 66.7
Phvul.001G201200 Phaseolus vulgaris HOM05D004682 ORTHO05D006197 1.9e-53 213.0 164 62.2
EL10Ac1g01562 Beta vulgaris HOM05D004682 ORTHO05D006197 3.3e-53 212.2 176 58.5
Potri.002G230800 Populus trichocarpa HOM05D004682 ORTHO05D006197 3.3e-53 212.2 165 66.7
arahy.Tifrunner.gnm1.ann1.SJK0SQ Arachis hypogaea HOM05D004682 ORTHO05D006197 5.6e-53 211.5 165 64.2
Ca_09103_v3 Cicer arietinum L. HOM05D004682 ORTHO05D006197 5.6e-53 211.5 165 63.6
Lj1g0026346 Lotus japonicus HOM05D004682 ORTHO05D006197 5.6e-53 211.5 165 64.2
Lalb_Chr20g0111011 Lupinus albus HOM05D004682 ORTHO05D006197 9.5e-53 210.7 165 62.4
Prupe.8G250900 Prunus persica HOM05D004682 ORTHO05D006197 9.5e-53 210.7 164 65.2
VMungo1383G2773 Vigna mungo HOM05D004682 ORTHO05D006197 1.2e-52 210.3 164 61.6
Cc01_g20100 Coffea canephora HOM05D004682 ORTHO05D006197 1.6e-52 209.9 164 61.6
Manes.01G212500 Manihot esculenta HOM05D004682 ORTHO05D006197 1.6e-52 209.9 165 65.5
Rhsim13G0018300 Rhododendron simsii HOM05D004682 ORTHO05D006197 1.6e-52 209.9 164 62.8
Sabra02G0176000 Salix brachista HOM05D004682 ORTHO05D006197 1.6e-52 209.9 166 66.9
SGA_v2.0_scaffold1G00427 Striga asiatica HOM05D004682 ORTHO05D006197 2.1e-52 209.5 164 63.4
MD11G1296700 Malus domestica HOM05D004682 ORTHO05D006197 3.6e-52 208.8 162 65.4
CDE05G1251 Ceratophyllum demersum HOM05D004682 ORTHO05D006197 4.7e-52 208.4 159 66.0
Sed0020737 Sechium edule HOM05D004682 ORTHO05D006197 4.7e-52 208.4 165 60.6
Nitab4.5_0000282g0030 Nicotiana tabacum HOM05D004682 ORTHO05D006197 6.2e-52 208.0 165 63.0
CsaV3_1G038120 Cucumis sativus L. HOM05D004682 ORTHO05D006197 1.4e-51 206.8 165 61.8
Nitab4.5_0000135g0040 Nicotiana tabacum HOM05D004682 ORTHO05D006197 1.4e-51 206.8 164 62.8
Hund18022 Selenicereus undatus HOM05D004682 ORTHO05D006197 1.4e-51 206.8 166 61.4
AT2G47980 Arabidopsis thaliana HOM05D004682 ORTHO05D006197 1.8e-51 206.5 164 62.8
Lalb_Chr25g0287581 Lupinus albus HOM05D004682 ORTHO05D006197 1.8e-51 206.5 166 64.5
AL4G47570 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 2.4e-51 206.1 164 62.8
AUR62026692 Chenopodium quinoa HOM05D004682 ORTHO05D006197 2.4e-51 206.1 176 56.8
AUR62013599 Chenopodium quinoa HOM05D004682 ORTHO05D006197 3.1e-51 205.7 176 56.8
Cpa.g.sc9.149 Carica papaya HOM05D004682 ORTHO05D006197 4.0e-51 205.3 165 63.0
MELO3C015235.2 Cucumis melo HOM05D004682 ORTHO05D006197 5.2e-51 204.9 165 61.2
unitig_22.g5252 Utricularia gibba HOM05D004682 ORTHO05D006197 5.2e-51 204.9 165 60.0
Ah.05g167980 Amaranthus hybridus HOM05D004682 ORTHO05D006197 6.8e-51 204.5 176 58.0
Aa31LG1G29400 Aethionema arabicum HOM05D004682 ORTHO05D006197 8.9e-51 204.1 164 62.8
Medtr1g048130 Medicago truncatula HOM05D004682 ORTHO05D006197 8.9e-51 204.1 165 60.6
Thhalv10001288m.g Eutrema salsugineum HOM05D004682 ORTHO05D006197 1.2e-50 203.8 164 62.8
PGR044G1334 Punica granatum HOM05D004682 ORTHO05D006197 1.5e-50 203.4 160 64.4
CAN.G13.21 Capsicum annuum HOM05D004682 ORTHO05D006197 4.4e-50 201.8 164 61.0
CARHR143360 Cardamine hirsuta HOM05D004682 ORTHO05D006197 5.8e-50 201.4 164 61.6
Medtr7g107440 Medicago truncatula HOM05D004682 ORTHO05D006197 5.8e-50 201.4 165 59.4
PGSC0003DMG401015901 Solanum tuberosum HOM05D004682 ORTHO05D006197 5.8e-50 201.4 165 60.6
Medtr1g047970 Medicago truncatula HOM05D004682 ORTHO05D006197 7.6e-50 201.1 165 59.4
Lsat_1_v5_gn_9_5121 Lactuca sativa HOM05D004682 ORTHO05D006197 9.9e-50 200.7 164 60.4
Sopen05g022990 Solanum pennellii HOM05D004682 ORTHO05D006197 9.9e-50 200.7 165 59.4
Solyc05g026510.4 Solanum lycopersicum HOM05D004682 ORTHO05D006197 1.3e-49 200.3 165 59.4
Carub.0004s3070 Capsella rubella HOM05D004682 ORTHO05D006197 1.7e-49 199.9 165 60.0
HanXRQChr10g0283031 Helianthus annuus HOM05D004682 ORTHO05D006197 4.9e-49 198.4 164 56.7
Sp4g29900 Schrenkiella parvula HOM05D004682 ORTHO05D006197 6.4e-49 198.0 164 60.4
BcaC02g12533 Brassica carinata HOM05D004682 ORTHO05D006197 8.4e-49 197.6 164 61.6
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 8.4e-49 197.6 164 61.6
AL7G17990 Arabidopsis lyrata HOM05D004682 ORTHO05D006197 1.4e-48 196.8 164 61.0
FvH4_2g24570 Fragaria vesca HOM05D004682 ORTHO05D006197 1.4e-48 196.8 165 61.8
FAN20G1430 Fragaria x ananassa HOM05D004682 ORTHO05D006197 1.4e-48 196.8 165 61.8
FAN24G1905 Fragaria x ananassa HOM05D004682 ORTHO05D006197 1.4e-48 196.8 165 61.8
Potri.014G151400 Populus trichocarpa HOM05D004682 ORTHO05D006197 2.4e-48 196.1 182 59.3
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 4.1e-48 195.3 164 61.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 4.1e-48 195.3 164 61.0
FAN27G0404 Fragaria x ananassa HOM05D004682 ORTHO05D006197 4.1e-48 195.3 161 62.7
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 5.4e-48 194.9 164 61.0
BcaB02g08728 Brassica carinata HOM05D004682 ORTHO05D006197 9.2e-48 194.1 164 60.4
FAN15G3206 Fragaria x ananassa HOM05D004682 ORTHO05D006197 9.2e-48 194.1 165 61.2
ECA247G2915 Erigeron canadensis HOM05D004682 ORTHO05D006197 1.2e-47 193.7 164 56.7
Zm00001eb115650 Zea mays HOM05D004682 ORTHO05D006197 1.2e-47 193.7 165 58.2
RcHm_v2.0_Chr6g0292391 Rosa chinensis HOM05D004682 ORTHO05D006197 3.5e-47 192.2 165 61.2
SEGI_13218 Sequoiadendron giganteum HOM05D004682 ORTHO05D006197 7.8e-47 191.0 171 55.0
Peaxi162Scf00159g01650 Petunia axillaris HOM05D004682 ORTHO05D006197 3.0e-46 189.1 164 57.3
Os05g0188500 Oryza sativa ssp. japonica HOM05D004682 ORTHO05D006197 3.9e-46 188.7 165 55.2
Medtr3g050420 Medicago truncatula HOM05D004682 ORTHO05D006197 1.5e-45 186.8 164 61.0
HPP92_017192 Vanilla planifolia HOM05D004682 ORTHO05D006197 8.1e-44 181.0 159 56.6
HPP92_027340 Vanilla planifolia HOM05D004682 ORTHO05D006197 1.8e-43 179.9 159 56.0
SHI14494 Sapria himalayana HOM05D004682 ORTHO05D006197 9.9e-42 174.1 170 53.5
ATR0706G112 Amborella trichopoda HOM05D004682 ORTHO05D006197 1.3e-41 173.7 159 59.1
COL.COLO4_31667 Corchorus olitorius HOM05D004682 ORTHO05D006197 9.3e-40 167.5 171 53.2
Pp3c9_5570 Physcomitrium patens HOM05D004682 ORTHO05D006197 2.5e-37 159.5 170 48.2
Thecc.06G206000 Theobroma cacao HOM05D004682 ORTHO05D006197 1.3e-36 157.1 117 65.8
Mapoly0007s0132 Marchantia polymorpha HOM05D004682 ORTHO05D006197 1.4e-35 153.7 171 46.8
SMO347G0479 Selaginella moellendorffii HOM05D004682 ORTHO05D006197 9.9e-34 147.5 160 46.2
AagrBONN_evm.TU.Sc2ySwM_369.560 Anthoceros agrestis HOM05D004682 ORTHO05D006197 2.5e-29 132.9 160 40.6
COL.COLO4_08044 Corchorus olitorius HOM05D004682 ORTHO05D006197 3.7e-28 129.0 112 60.7
PGSC0003DMG400006683 Solanum tuberosum HOM05D004682 ORTHO05D006197 6.4e-25 118.2 121 54.5
PGSC0003DMG400019559 Solanum tuberosum HOM05D004682 ORTHO05D006197 1.9e-21 106.7 104 53.8
HanXRQChr08g0228681 Helianthus annuus HOM05D004682 ORTHO05D006197 2.6e-18 96.3 102 49.0
Lj2A1184G69 Lonicera japonica HOM05D004682 ORTHO05D006197 5.8e-18 95.1 164 37.2
CBR_g31051 Chara braunii HOM05D004682 ORTHO05D006197 2.9e-17 92.8 134 36.6
Medtr5g092920 Medicago truncatula HOM05D036979 ORTHO05D006197 5.5e-08 62.0 80 47.5
Solyc05g021530.3 Solanum lycopersicum HOM05D025699 ORTHO05D026176 3.0e-06 56.2 78 42.3


User provided reference genes

Program Settings