Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.4e-129 467.2 443 100.0
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 4.2e-86 322.8 447 83.2
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 1.3e-26 125.2 243 42.8
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.7e-24 117.5 249 37.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 8.6e-23 112.5 248 38.7
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 1.4e-20 105.1 228 38.2
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 1.2e-19 102.1 244 35.2
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 4.4e-19 100.1 242 34.3
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 9.8e-19 99.0 251 35.5
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 6.4e-18 96.3 248 32.7
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 6.4e-18 96.3 214 36.0
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 8.3e-18 95.9 268 32.8
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 1.4e-17 95.1 239 34.7
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 1.8e-17 94.7 262 31.3
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 4.1e-17 93.6 241 33.6
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 4.1e-17 93.6 236 31.8
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 9.2e-17 92.4 230 36.1
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 9.2e-17 92.4 220 33.6
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 1.6e-16 91.7 65 61.5
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 2.0e-16 91.3 270 33.7
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 2.0e-16 91.3 247 31.6
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 2.7e-16 90.9 262 30.5
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 4.6e-16 90.1 222 35.6
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.3e-15 88.6 224 33.0
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.9e-15 87.0 227 33.5
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 5.0e-15 86.7 122 45.9
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 5.0e-15 86.7 246 30.5
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 6.6e-15 86.3 253 32.8
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.1e-14 85.5 238 32.4
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 1.9e-14 84.7 209 33.5
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 2.5e-14 84.3 235 32.3
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 3.3e-14 84.0 237 32.9
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 4.3e-14 83.6 261 29.9
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 4.3e-14 83.6 203 33.5
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 4.3e-14 83.6 245 34.3
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 7.3e-14 82.8 225 33.3
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 7.3e-14 82.8 233 33.0
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 9.5e-14 82.4 109 48.6
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 9.5e-14 82.4 255 31.4
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 9.5e-14 82.4 244 30.3
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 2.1e-13 81.3 143 39.9
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 2.8e-13 80.9 238 31.5
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 2.8e-13 80.9 259 30.9
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 2.8e-13 80.9 247 31.6
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 3.6e-13 80.5 201 34.3
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 3.6e-13 80.5 68 61.8
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 6.2e-13 79.7 100 50.0
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 1.0e-12 79.0 100 50.0
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 1.0e-12 79.0 203 32.5
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.8e-12 78.2 248 29.8
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.8e-12 78.2 173 36.4
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 1.8e-12 78.2 169 33.7
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 3.1e-12 77.4 248 29.4
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 3.1e-12 77.4 221 31.7
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 4.0e-12 77.0 164 36.0
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 4.0e-12 77.0 230 31.3
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 6.8e-12 76.3 255 31.4
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 6.8e-12 76.3 220 31.4
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 8.9e-12 75.9 218 32.6
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 1.5e-11 75.1 240 30.4
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.5e-11 75.1 248 28.6
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.5e-11 75.1 248 28.6
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 4.4e-11 73.6 241 29.9
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 4.4e-11 73.6 200 33.5
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 5.8e-11 73.2 231 31.2
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 7.5e-11 72.8 225 33.3
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 9.8e-11 72.4 128 39.1
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 1.3e-10 72.0 190 33.2
Zm00001eb015900 Zea mays HOM05D006830 ORTHO05D008119 3.7e-10 70.5 61 62.3
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 6.4e-10 69.7 90 48.9
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 6.4e-10 69.7 133 38.3
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 8.3e-10 69.3 165 37.0
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.9e-09 68.2 191 33.5
HPP92_012572 Vanilla planifolia HOM05D006830 ORTHO05D008119 2.4e-09 67.8 226 32.3
HPP92_012541 Vanilla planifolia HOM05D006830 ORTHO05D008119 3.2e-09 67.4 65 53.8
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 4.1e-09 67.0 217 32.3
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 5.4e-09 66.6 239 29.7
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 7.0e-09 66.2 241 29.5
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 1.2e-08 65.5 211 31.8
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 1.2e-08 65.5 259 29.7
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 1.6e-08 65.1 217 31.8
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.6e-08 65.1 176 31.8
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 2.0e-08 64.7 68 50.0
Aqoxy4G03294 Aquilegia oxysepala HOM05D006830 ORTHO05D008119 2.7e-08 64.3 76 48.7
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 3.5e-08 63.9 227 30.4
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 3.5e-08 63.9 227 30.4
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 3.5e-08 63.9 253 28.9
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 4.6e-08 63.5 87 43.7
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 4.6e-08 63.5 158 35.4
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 7.8e-08 62.8 227 30.0
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 7.8e-08 62.8 227 30.0
Lsat_1_v5_gn_5_151701 Lactuca sativa HOM05D006830 ORTHO05D008119 1.7e-07 61.6 59 54.2
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 3.9e-07 60.5 173 31.8
Os03g0333000 Oryza sativa ssp. japonica HOM05D006830 ORTHO05D008119 3.9e-07 60.5 192 33.3
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 6.6e-07 59.7 221 30.3
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 6.6e-07 59.7 231 29.0
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 1.1e-06 58.9 258 26.7
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 1.5e-06 58.5 169 32.5
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.5e-06 58.5 161 36.6
Aa31LG5G23390 Aethionema arabicum HOM05D006830 ORTHO05D008119 2.5e-06 57.8 73 46.6
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 2.5e-06 57.8 30 83.3
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 4.3e-06 57.0 165 37.6
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 5.6e-06 56.6 188 31.9


User provided reference genes

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