Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2526 Papaver somniferum HOM05D002916 ORTHO05D003152 2.6e-74 282.0 143 100.0
PSO339G4347 Papaver somniferum HOM05D002916 ORTHO05D003152 1.8e-51 206.1 176 68.2
Nn6g34891 Nelumbo nucifera HOM05D002916 ORTHO05D003152 2.0e-21 106.3 153 41.8
Nn2g14164 Nelumbo nucifera HOM05D002916 ORTHO05D003152 6.4e-20 101.3 166 41.0
Aqoxy4G02773 Aquilegia oxysepala HOM05D002916 ORTHO05D003152 1.1e-19 100.5 166 40.4
Atru.chr8.1528 Acer truncatum HOM05D002916 ORTHO05D003152 4.1e-19 98.6 168 40.5
Atru.chr8.1530 Acer truncatum HOM05D002916 ORTHO05D003152 1.6e-18 96.7 168 39.9
Dinv31688 Davidia involucrata HOM05D004140 ORTHO05D006116 2.1e-18 96.3 166 39.2
Duzib128G0442 Durio zibethinus HOM05D002916 ORTHO05D003152 1.3e-17 93.6 165 38.2
Peaxi162Scf00404g00102 Petunia axillaris HOM05D002916 ORTHO05D003152 3.0e-17 92.4 169 38.5
Manes.08G025700 Manihot esculenta HOM05D002916 ORTHO05D003152 3.9e-17 92.0 162 36.4
Rhsim03G0074900 Rhododendron simsii HOM05D002916 ORTHO05D003152 3.9e-17 92.0 167 35.3
Oeu056929.1 Olea europaea HOM05D002916 ORTHO05D003152 5.0e-17 91.7 166 40.4
Thecc.05G089800 Theobroma cacao HOM05D002916 ORTHO05D003152 1.5e-16 90.1 165 35.8
Cpa.g.sc5.15 Carica papaya HOM05D002916 ORTHO05D003152 5.6e-16 88.2 168 37.5
Manes.09G055000 Manihot esculenta HOM05D002916 ORTHO05D003152 2.1e-15 86.3 162 36.4
RcHm_v2.0_Chr3g0473821 Rosa chinensis HOM05D002916 ORTHO05D003152 2.1e-15 86.3 167 34.7
COL.COLO4_29727 Corchorus olitorius HOM05D002916 ORTHO05D003152 2.8e-15 85.9 166 34.3
Oeu047865.1 Olea europaea HOM05D002916 ORTHO05D003152 2.8e-15 85.9 165 37.0
CiPaw.01G252200 Carya illinoinensis HOM05D002916 ORTHO05D003152 3.6e-15 85.5 166 38.6
Glyma.13G153800 Glycine max HOM05D002916 ORTHO05D003152 8.1e-15 84.3 170 38.2
Potri.016G079700 Populus trichocarpa HOM05D002916 ORTHO05D003152 1.1e-14 84.0 167 36.5
Prupe.7G109500 Prunus persica HOM05D002916 ORTHO05D003152 1.1e-14 84.0 164 34.8
MD12G1036700 Malus domestica HOM05D002916 ORTHO05D003152 1.8e-14 83.2 167 35.3
Duzib093G0112 Durio zibethinus HOM05D002916 ORTHO05D003152 2.3e-14 82.8 166 36.7
FAN02G4366 Fragaria x ananassa HOM05D002916 ORTHO05D003152 3.1e-14 82.4 167 34.7
Gohir.A04G062400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.1e-14 82.4 167 34.7
DCAR_013392 Daucus carota HOM05D002916 ORTHO05D003152 6.8e-14 81.3 168 37.5
FvH4_6g18810 Fragaria vesca HOM05D002916 ORTHO05D003152 6.8e-14 81.3 167 34.1
FAN14G1204 Fragaria x ananassa HOM05D002916 ORTHO05D003152 6.8e-14 81.3 167 34.1
Gorai.009G402300 Gossypium raimondii HOM05D002916 ORTHO05D003152 6.8e-14 81.3 167 34.1
DCAR_009166 Daucus carota HOM05D002916 ORTHO05D003152 8.9e-14 80.9 166 34.9
Glyma.19G194943 Glycine max HOM05D002916 ORTHO05D003152 8.9e-14 80.9 162 32.7
Lalb_Chr01g0018131 Lupinus albus HOM05D002916 ORTHO05D003152 8.9e-14 80.9 164 34.1
TWI53G0172 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.2e-13 80.5 167 35.3
Gohir.D04G099400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.5e-13 80.1 167 34.1
Actinidia05426 Actinidia chinensis HOM05D002916 ORTHO05D003152 2.6e-13 79.3 168 35.7
Gorai.002G239800 Gossypium raimondii HOM05D002916 ORTHO05D003152 3.4e-13 79.0 167 35.9
Sabra16G0085600 Salix brachista HOM05D002916 ORTHO05D003152 3.4e-13 79.0 167 32.9
Sabra16G0087700 Salix brachista HOM05D002916 ORTHO05D003152 3.4e-13 79.0 167 32.9
QL05p034193 Quercus lobata HOM05D002916 ORTHO05D003152 4.4e-13 78.6 166 36.7
Ciclev10012941m.g Citrus clementina HOM05D002916 ORTHO05D003152 5.8e-13 78.2 166 32.5
Glyma.10G072400 Glycine max HOM05D002916 ORTHO05D003152 5.8e-13 78.2 172 36.6
DCAR_007755 Daucus carota HOM05D002916 ORTHO05D003152 7.5e-13 77.8 158 38.0
MD14G1023400 Malus domestica HOM05D002916 ORTHO05D003152 7.5e-13 77.8 170 32.9
DCAR_013389 Daucus carota HOM05D002916 ORTHO05D003152 9.9e-13 77.4 163 37.4
DCAR_013391 Daucus carota HOM05D002916 ORTHO05D003152 9.9e-13 77.4 161 34.8
Ciclev10013433m.g Citrus clementina HOM05D002916 ORTHO05D003152 1.3e-12 77.0 169 35.5
Gohir.A01G206200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.3e-12 77.0 169 33.7
TWI74G0225 Tripterygium wilfordii HOM05D002916 ORTHO05D003152 1.3e-12 77.0 163 33.1
Glyma.03G196300 Glycine max HOM05D002916 ORTHO05D003152 2.2e-12 76.3 163 31.3
Gohir.D01G195600 Gossypium hirsutum HOM05D002916 ORTHO05D003152 2.2e-12 76.3 167 35.3
Phvul.001G190500 Phaseolus vulgaris HOM05D002916 ORTHO05D003152 2.2e-12 76.3 167 31.7
Potri.006G213100 Populus trichocarpa HOM05D002916 ORTHO05D003152 2.2e-12 76.3 169 32.5
CsaV3_6G040690 Cucumis sativus L. HOM05D002916 ORTHO05D003152 4.9e-12 75.1 170 33.5
DCAR_013390 Daucus carota HOM05D002916 ORTHO05D003152 6.4e-12 74.7 162 34.0
Hma1.2p1_0084F.1_g043850 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 6.4e-12 74.7 157 36.9
Hma1.2p1_0820F.1_g223855 Hydrangea macrophylla HOM05D002916 ORTHO05D003152 6.4e-12 74.7 157 36.9
Nitab4.5_0000794g0180 Nicotiana tabacum HOM05D002916 ORTHO05D003152 6.4e-12 74.7 142 33.8
Ca_09009_v3 Cicer arietinum L. HOM05D002916 ORTHO05D003152 8.3e-12 74.3 167 30.5
FAN05G4254 Fragaria x ananassa HOM05D002916 ORTHO05D003152 8.3e-12 74.3 167 32.3
Gohir.A07G134900 Gossypium hirsutum HOM05D002916 ORTHO05D003152 8.3e-12 74.3 168 34.5
Sed0018474 Sechium edule HOM05D002916 ORTHO05D003152 8.3e-12 74.3 168 32.1
VMungo1383G0514 Vigna mungo HOM05D002916 ORTHO05D003152 8.3e-12 74.3 167 31.1
MELO3C024547.2 Cucumis melo HOM05D002916 ORTHO05D003152 1.1e-11 73.9 172 33.7
FAN05G3486 Fragaria x ananassa HOM05D002916 ORTHO05D003152 1.1e-11 73.9 167 32.3
MSTRG.26638 Avicennia marina HOM05D002916 ORTHO05D003152 1.9e-11 73.2 168 32.7
Migut.L01781 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.9e-11 73.2 173 33.5
Lsat_1_v5_gn_5_164861 Lactuca sativa HOM05D002916 ORTHO05D003152 2.4e-11 72.8 155 34.8
Eucgr.K02033 Eucalyptus grandis HOM05D002916 ORTHO05D003152 3.2e-11 72.4 180 34.4
Actinidia31270 Actinidia chinensis HOM05D002916 ORTHO05D003152 4.1e-11 72.0 144 35.4
Gohir.D09G135200 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.1e-11 72.0 167 33.5
Lj1g0017693 Lotus japonicus HOM05D002916 ORTHO05D003152 4.1e-11 72.0 166 32.5
Gorai.006G155100 Gossypium raimondii HOM05D002916 ORTHO05D003152 5.4e-11 71.6 167 33.5
Sabra06G0164100 Salix brachista HOM05D002916 ORTHO05D003152 9.2e-11 70.9 125 36.0
BcaB01g05762 Brassica carinata HOM05D002916 ORTHO05D003152 1.2e-10 70.5 159 27.7
Migut.J01032 Erythranthe guttata HOM05D002916 ORTHO05D003152 1.2e-10 70.5 156 32.7
Haze_16634 Corylus avellana HOM05D002916 ORTHO05D003152 1.6e-10 70.1 168 34.5
Haze_16636 Corylus avellana HOM05D002916 ORTHO05D003152 1.6e-10 70.1 168 34.5
THA.LOC104816397 Tarenaya hassleriana HOM05D002916 ORTHO05D003152 1.6e-10 70.1 187 27.3
A05p38970 Brassica napus HOM05D002916 ORTHO05D003152 2.7e-10 69.3 172 27.3
BraA05t22688Z Brassica rapa HOM05D002916 ORTHO05D003152 2.7e-10 69.3 172 27.3
AUR62006186 Chenopodium quinoa HOM05D002916 ORTHO05D003152 2.7e-10 69.3 167 35.3
ClCG04G010060 Citrullus lanatus HOM05D002916 ORTHO05D003152 3.5e-10 68.9 163 30.7
C05p58000 Brassica napus HOM05D002916 ORTHO05D003152 4.6e-10 68.6 172 27.3
Gohir.A11G003500 Gossypium hirsutum HOM05D002916 ORTHO05D003152 4.6e-10 68.6 155 34.8
BolC5t34456H Brassica oleracea HOM05D002916 ORTHO05D003152 1.0e-09 67.4 172 27.3
BcaNung06240 Brassica carinata HOM05D002916 ORTHO05D003152 1.3e-09 67.0 172 26.7
Cfa001906 Carpinus fangiana HOM05D002916 ORTHO05D003152 1.3e-09 67.0 168 33.3
SEGI_19412 Sequoiadendron giganteum HOM05D002916 ORTHO05D003152 1.3e-09 67.0 174 33.3
Gohir.A05G000100 Gossypium hirsutum HOM05D002916 ORTHO05D003152 3.0e-09 65.9 169 31.4
BcaC09g48115 Brassica carinata HOM05D002916 ORTHO05D003152 3.9e-09 65.5 181 26.5
Prupe.2G317800 Prunus persica HOM05D002916 ORTHO05D003152 3.9e-09 65.5 154 35.1
A03p01480 Brassica napus HOM05D002916 ORTHO05D003152 6.6e-09 64.7 186 28.5
BraA03t09526Z Brassica rapa HOM05D002916 ORTHO05D003152 6.6e-09 64.7 186 28.5
Cc06_g05820 Coffea canephora HOM05D002916 ORTHO05D003152 6.6e-09 64.7 161 28.6
BolC1t05420H Brassica oleracea HOM05D002916 ORTHO05D003152 8.6e-09 64.3 181 28.7
AUR62028520 Chenopodium quinoa HOM05D002916 ORTHO05D003152 8.6e-09 64.3 167 32.9
C03p01810 Brassica napus HOM05D002916 ORTHO05D003152 1.1e-08 63.9 186 28.0
ATR0078G023 Amborella trichopoda HOM05D002916 ORTHO05D003152 1.5e-08 63.5 169 35.5
Gohir.A09G139400 Gossypium hirsutum HOM05D002916 ORTHO05D003152 1.5e-08 63.5 123 35.8
arahy.Tifrunner.gnm1.ann1.1GMW3T Arachis hypogaea HOM05D002916 ORTHO05D003152 2.5e-08 62.8 191 31.4
arahy.Tifrunner.gnm1.ann1.T8X57X Arachis hypogaea HOM05D002916 ORTHO05D003152 2.5e-08 62.8 191 31.4
CARHR209370 Cardamine hirsuta HOM05D002916 ORTHO05D003152 2.5e-08 62.8 185 28.1
Solyc09g009810.1 Solanum lycopersicum HOM05D002916 ORTHO05D003152 2.5e-08 62.8 45 62.2
PGSC0003DMG400008880 Solanum tuberosum HOM05D002916 ORTHO05D003152 2.5e-08 62.8 45 62.2
BcaNung05911 Brassica carinata HOM05D002916 ORTHO05D003152 3.3e-08 62.4 182 24.7
Medtr7g104680 Medicago truncatula HOM05D002916 ORTHO05D003152 3.3e-08 62.4 144 32.6
PGR004G1189 Punica granatum HOM05D002916 ORTHO05D003152 4.3e-08 62.0 171 30.4
AL6G13470 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 5.6e-08 61.6 182 29.1
AT5G03890 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 5.6e-08 61.6 182 26.4
Sp3g08400 Schrenkiella parvula HOM05D002916 ORTHO05D003152 7.3e-08 61.2 182 26.4
PGR142G0380 Punica granatum HOM05D002916 ORTHO05D003152 9.5e-08 60.8 190 26.8
ECA236G4089 Erigeron canadensis HOM05D002916 ORTHO05D003152 1.2e-07 60.5 142 32.4
Thhalv10014801m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.2e-07 60.5 189 28.0
BcaB04g21229 Brassica carinata HOM05D002916 ORTHO05D003152 1.6e-07 60.1 182 25.3
Carub.0006s0284 Capsella rubella HOM05D002916 ORTHO05D003152 1.6e-07 60.1 181 24.9
Thhalv10021626m.g Eutrema salsugineum HOM05D002916 ORTHO05D003152 1.6e-07 60.1 191 25.1
A10p32230 Brassica napus HOM05D002916 ORTHO05D003152 2.1e-07 59.7 182 25.8
BraA10t45266Z Brassica rapa HOM05D002916 ORTHO05D003152 2.1e-07 59.7 182 25.8
BolC9t60038H Brassica oleracea HOM05D002916 ORTHO05D003152 3.6e-07 58.9 183 25.7
C09p73040 Brassica napus HOM05D002916 ORTHO05D003152 4.7e-07 58.5 182 25.8
Ah.15g090860 Amaranthus hybridus HOM05D002916 ORTHO05D003152 6.2e-07 58.2 166 30.1
AT3G10120 Arabidopsis thaliana HOM05D002916 ORTHO05D003152 8.1e-07 57.8 184 26.1
CARHR084600 Cardamine hirsuta HOM05D002916 ORTHO05D003152 8.1e-07 57.8 183 25.1
AL3G21460 Arabidopsis lyrata HOM05D002916 ORTHO05D003152 1.8e-06 56.6 183 25.7
Aa31LG3G2650 Aethionema arabicum HOM05D002916 ORTHO05D003152 2.4e-06 56.2 194 22.7
QL02p027552 Quercus lobata HOM05D002916 ORTHO05D003152 5.2e-06 55.1 146 31.5
Eucgr.A02661 Eucalyptus grandis HOM05D002916 ORTHO05D003152 8.9e-06 54.3 142 25.4


User provided reference genes

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