Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 3.6e-163 578.2 292 100.0
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 1.0e-69 267.7 239 66.1
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 3.7e-67 259.2 297 50.2
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 2.8e-62 243.0 297 49.8
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 4.0e-61 239.2 297 48.5
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 2.4e-58 229.9 298 46.3
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 1.2e-52 211.1 298 43.0
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 5.8e-52 208.8 298 43.0
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.7e-51 207.2 300 40.3
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 6.4e-51 205.3 298 42.6
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 8.4e-51 204.9 298 42.6
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 8.4e-51 204.9 298 41.3
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.4e-50 204.1 298 41.3
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 4.1e-50 202.6 300 41.3
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 4.1e-50 202.6 299 44.1
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 7.1e-50 201.8 301 43.2
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.6e-49 200.7 298 40.3
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.1e-49 200.3 298 40.3
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 7.8e-49 198.4 298 42.3
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.8e-49 198.4 298 40.3
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 7.8e-49 198.4 296 41.6
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 1.0e-48 198.0 300 41.3
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.0e-48 198.0 298 40.3
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.3e-48 197.6 298 39.6
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.7e-48 197.2 298 39.6
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.7e-48 197.2 298 39.6
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 1.1e-47 194.5 303 43.6
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.5e-47 194.1 299 41.1
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 4.3e-47 192.6 296 40.2
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 5.6e-47 192.2 296 39.5
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 9.6e-47 191.4 300 41.0
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 2.8e-46 189.9 296 38.9
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 2.8e-46 189.9 298 40.9
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 2.8e-46 189.9 299 39.1
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 2.8e-46 189.9 299 39.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 3.6e-46 189.5 300 40.7
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 6.2e-46 188.7 298 40.6
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 6.2e-46 188.7 298 40.6
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 8.1e-46 188.3 298 37.9
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.1e-45 188.0 299 41.8
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.8e-45 187.2 299 39.1
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 1.8e-45 187.2 298 37.9
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 1.8e-45 187.2 298 37.6
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 2.4e-45 186.8 295 39.7
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 4.0e-45 186.0 300 38.0
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 4.0e-45 186.0 299 39.8
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 5.2e-45 185.7 298 40.3
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 6.9e-45 185.3 301 41.9
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 6.9e-45 185.3 298 39.9
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 6.9e-45 185.3 298 40.3
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.2e-44 184.5 299 40.1
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 1.2e-44 184.5 296 38.5
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 2.0e-44 183.7 296 39.2
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 2.0e-44 183.7 299 39.5
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.0e-44 183.7 298 38.3
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 5.8e-44 182.2 298 41.3
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 5.8e-44 182.2 297 38.7
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 5.8e-44 182.2 363 36.4
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 9.9e-44 181.4 343 35.6
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 9.9e-44 181.4 300 39.7
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.7e-43 180.6 298 38.6
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 2.2e-43 180.3 299 39.1
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 3.8e-43 179.5 298 37.6
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 8.4e-43 178.3 299 39.5
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 1.9e-42 177.2 297 39.7
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 4.2e-42 176.0 299 37.5
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 1.2e-41 174.5 294 39.1
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 3.5e-41 172.9 300 39.3
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.0e-40 171.4 300 38.0
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 1.0e-40 171.4 298 37.9
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.7e-40 170.6 341 37.2
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 2.3e-40 170.2 298 35.9
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 3.0e-40 169.9 238 44.5
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.5e-39 167.5 238 43.3
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 3.3e-39 166.4 274 37.6
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 3.3e-39 166.4 299 35.8
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 3.3e-39 166.4 301 35.2
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 3.3e-39 166.4 298 37.2
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.6e-38 164.1 299 35.8
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 1.6e-38 164.1 298 35.6
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 3.6e-38 162.9 299 36.1
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 3.6e-38 162.9 299 36.5
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.8e-38 162.5 301 36.5
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 6.2e-38 162.2 315 34.9
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.1e-37 161.4 321 36.4
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 1.8e-37 160.6 298 37.6
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 3.1e-37 159.8 299 34.8
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 4.0e-37 159.5 299 35.8
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 9.0e-37 158.3 299 35.5
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.2e-36 157.9 239 38.9
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 2.6e-36 156.8 300 35.0
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 3.4e-36 156.4 217 41.5
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 9.9e-36 154.8 293 34.8
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.3e-35 154.5 299 33.8
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 2.2e-35 153.7 300 33.3
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 2.9e-35 153.3 239 41.0
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 2.9e-35 153.3 299 34.8
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 1.4e-34 151.0 302 34.1
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 1.9e-34 150.6 296 35.1
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.2e-33 147.9 291 33.3
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.6e-33 147.5 299 35.1
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 6.0e-33 145.6 238 39.9
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.0e-32 144.8 300 34.7
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.3e-32 144.4 302 32.8
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 1.8e-32 144.1 302 32.8
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 5.1e-32 142.5 294 32.7
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 1.1e-31 141.4 293 33.4
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.3e-30 137.9 239 36.8
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 2.1e-30 137.1 300 33.0
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 3.7e-30 136.3 236 37.3
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 1.4e-29 134.4 219 40.2
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 6.9e-29 132.1 298 30.2
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 1.5e-28 131.0 299 33.1
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 2.9e-27 126.7 293 30.0
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.9e-27 126.7 299 33.1
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 1.3e-24 117.9 301 28.9
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 1.8e-24 117.5 208 38.9
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 3.9e-24 116.3 300 32.3
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.3e-22 111.3 296 29.7
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 2.8e-22 110.2 172 40.1
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 6.2e-22 109.0 179 39.7
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 2.4e-21 107.1 224 33.5
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 3.1e-21 106.7 299 29.4
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 9.0e-21 105.1 143 44.1
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 4.5e-20 102.8 180 40.6
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 3.2e-18 96.7 172 37.8
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 7.1e-18 95.5 169 40.8
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 3.3e-15 86.7 301 25.2
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 5.3e-13 79.3 210 30.0
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 7.6e-12 75.5 129 34.1
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 2.5e-10 70.5 127 29.1


User provided reference genes

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