Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2456 Papaver somniferum HOM05D002214 ORTHO05D005113 2.1e-70 268.9 132 100.0
PSO384G0821 Papaver somniferum HOM05D002214 ORTHO05D005113 7.1e-50 200.7 118 83.9
PSO339G2935 Papaver somniferum HOM05D002214 ORTHO05D005113 3.5e-41 171.8 119 70.6
PSO384G1687 Papaver somniferum HOM05D002214 ORTHO05D005113 1.4e-37 159.8 99 77.8
PSO339G2857 Papaver somniferum HOM05D002214 ORTHO05D005113 5.0e-35 151.4 99 72.7
PSO384G3036 Papaver somniferum HOM05D002214 ORTHO05D005113 6.7e-32 141.0 90 74.4
PSO339G3802 Papaver somniferum HOM05D002214 ORTHO05D005113 3.8e-27 125.2 89 66.3
PSO339G1526 Papaver somniferum HOM05D002214 ORTHO05D005113 2.1e-25 119.4 101 59.4
PSO384G1143 Papaver somniferum HOM05D002214 ORTHO05D005113 2.1e-25 119.4 101 59.4
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.8e-24 116.3 98 60.2
ClCG09G004420 Citrullus lanatus HOM05D002214 ORTHO05D005113 3.0e-24 115.5 101 58.4
Ciclev10032739m.g Citrus clementina HOM05D002214 ORTHO05D005113 3.0e-24 115.5 101 58.4
MELO3C023584.2 Cucumis melo HOM05D002214 ORTHO05D005113 3.0e-24 115.5 101 58.4
CsaV3_7G030720 Cucumis sativus L. HOM05D002214 ORTHO05D005113 3.0e-24 115.5 101 58.4
Cc02_g28810 Coffea canephora HOM05D002214 ORTHO05D005113 5.1e-24 114.8 98 59.2
PSO384G5131 Papaver somniferum HOM05D002214 ORTHO05D005113 5.1e-24 114.8 98 60.2
Sp6g30240 Schrenkiella parvula HOM05D002214 ORTHO05D005113 5.1e-24 114.8 101 58.4
SGA_v2.0_scaffold119G32765 Striga asiatica HOM05D002214 ORTHO05D005113 5.1e-24 114.8 101 59.4
Eucgr.J01208 Eucalyptus grandis HOM05D002214 ORTHO05D005113 6.7e-24 114.4 95 62.1
PGR031G1630 Punica granatum HOM05D002214 ORTHO05D005113 6.7e-24 114.4 95 62.1
THA.LOC104809846 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 6.7e-24 114.4 101 57.4
QL04p010049 Quercus lobata HOM05D002214 ORTHO05D005113 1.1e-23 113.6 95 61.1
unitig_37.g12366 Utricularia gibba HOM05D002214 ORTHO05D005113 1.1e-23 113.6 96 60.4
CSS0031731 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D005113 1.5e-23 113.2 98 59.2
Lj9A641T66 Lonicera japonica HOM05D002214 ORTHO05D005113 1.5e-23 113.2 95 61.1
Lalb_Chr04g0263831 Lupinus albus HOM05D002214 ORTHO05D005113 1.5e-23 113.2 95 62.1
RcHm_v2.0_Chr1g0318401 Rosa chinensis HOM05D002214 ORTHO05D005113 2.0e-23 112.8 101 57.4
Cpa.g.sc125.49 Carica papaya HOM05D002214 ORTHO05D005113 3.3e-23 112.1 98 59.2
CiPaw.13G008000 Carya illinoinensis HOM05D002214 ORTHO05D005113 3.3e-23 112.1 98 59.2
MBI19_g12816_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D005113 3.3e-23 112.1 95 60.0
PSO339G1308 Papaver somniferum HOM05D002214 ORTHO05D005113 3.3e-23 112.1 93 61.3
Phvul.011G183200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 4.4e-23 111.7 96 59.4
Psat5g212520 Pisum sativum HOM05D002214 ORTHO05D005113 4.4e-23 111.7 102 57.8
Glyma.04G142300 Glycine max HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
Glyma.11G159648 Glycine max HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
Potri.009G056600 Populus trichocarpa HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
Rhsim01G0125000 Rhododendron simsii HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
SalBow6G0878 Salvia bowleyana HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
TPR.G14549 Trifolium pratense HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 61.1
VMungo1080G0077 Vigna mungo HOM05D002214 ORTHO05D005113 5.7e-23 111.3 95 60.0
Atru.chr11.2514 Acer truncatum HOM05D002214 ORTHO05D005113 7.4e-23 110.9 98 57.1
MSTRG.17006 Avicennia marina HOM05D002214 ORTHO05D005113 7.4e-23 110.9 98 58.2
CiPaw.14G003300 Carya illinoinensis HOM05D002214 ORTHO05D005113 7.4e-23 110.9 98 58.2
Nn2g15193 Nelumbo nucifera HOM05D002214 ORTHO05D005113 7.4e-23 110.9 95 60.0
AL6G24400 Arabidopsis lyrata HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
AT5G13780 Arabidopsis thaliana HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
Carub.0006s1196 Capsella rubella HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
CARHR199660 Cardamine hirsuta HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
Ca_27724_v3 Cicer arietinum L. HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
Thhalv10014756m.g Eutrema salsugineum HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
HanXRQChr08g0226841 Helianthus annuus HOM05D002214 ORTHO05D005113 9.7e-23 110.5 96 58.3
Lj3g0001707 Lotus japonicus HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
THA.LOC104819106 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
Thecc.01G406300 Theobroma cacao HOM05D002214 ORTHO05D005113 9.7e-23 110.5 95 60.0
Cfa010811 Carpinus fangiana HOM05D002214 ORTHO05D005113 1.3e-22 110.2 94 59.6
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.3e-22 110.2 95 58.9
Haze_03145 Corylus avellana HOM05D002214 ORTHO05D005113 1.3e-22 110.2 94 59.6
Haze_03148 Corylus avellana HOM05D002214 ORTHO05D005113 1.3e-22 110.2 94 59.6
DCAR_003226 Daucus carota HOM05D002214 ORTHO05D005113 1.3e-22 110.2 102 57.8
Migut.B01260 Erythranthe guttata HOM05D002214 ORTHO05D005113 1.3e-22 110.2 96 59.4
Sed0009169 Sechium edule HOM05D002214 ORTHO05D005113 1.3e-22 110.2 101 56.4
VMungo1127G0768 Vigna mungo HOM05D002214 ORTHO05D005113 1.3e-22 110.2 95 58.9
Aa31sc919G10 Aethionema arabicum HOM05D002214 ORTHO05D005113 1.7e-22 109.8 95 60.0
Medtr3g034200 Medicago truncatula HOM05D002214 ORTHO05D005113 1.7e-22 109.8 94 60.6
PSO384G0095 Papaver somniferum HOM05D002214 ORTHO05D005113 1.7e-22 109.8 128 46.9
Phvul.005G035200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 1.7e-22 109.8 95 58.9
BcaNung04185 Brassica carinata HOM05D002214 ORTHO05D005113 2.2e-22 109.4 98 58.2
A02p02180 Brassica napus HOM05D002214 ORTHO05D005113 2.2e-22 109.4 98 58.2
C02p06430 Brassica napus HOM05D002214 ORTHO05D005113 2.2e-22 109.4 98 58.2
BolC2t06589H Brassica oleracea HOM05D002214 ORTHO05D005113 2.2e-22 109.4 98 58.2
Duzib133G1108 Durio zibethinus HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 58.9
MD07G1023300 Malus domestica HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 57.9
Manes.07G010700 Manihot esculenta HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 58.9
Manes.10G136000 Manihot esculenta HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 58.9
Peaxi162Scf01270g00125 Petunia axillaris HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 60.0
Prupe.2G024200 Prunus persica HOM05D002214 ORTHO05D005113 2.2e-22 109.4 95 57.9
FvH4_7g01790 Fragaria vesca HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 56.8
FAN03G0770 Fragaria x ananassa HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 56.8
FAN10G3956 Fragaria x ananassa HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 56.8
Sabra16G0160600 Salix brachista HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 58.9
TWI53G0951 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 58.9
TWI53G1910 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 58.9
TAR623G1010 Trochodendron aralioides HOM05D002214 ORTHO05D005113 2.8e-22 109.0 95 57.9
CANSAT80G0460 Cannabis sativa HOM05D002214 ORTHO05D005113 3.7e-22 108.6 95 56.8
Gohir.A11G135400 Gossypium hirsutum HOM05D002214 ORTHO05D005113 4.8e-22 108.2 94 58.5
Lsat_1_v5_gn_6_74341 Lactuca sativa HOM05D002214 ORTHO05D005113 4.8e-22 108.2 94 58.5
GSVIVG01032214001 Vitis vinifera HOM05D002214 ORTHO05D005113 4.8e-22 108.2 93 59.1
BcaNung04183 Brassica carinata HOM05D002214 ORTHO05D005113 6.3e-22 107.8 95 58.9
HanXRQChr03g0082771 Helianthus annuus HOM05D002214 ORTHO05D005113 6.3e-22 107.8 94 58.5
BcaC04g19081 Brassica carinata HOM05D002214 ORTHO05D005113 8.2e-22 107.5 101 54.5
BolC9t59169H Brassica oleracea HOM05D002214 ORTHO05D005113 8.2e-22 107.5 101 54.5
Lsat_1_v5_gn_6_17421 Lactuca sativa HOM05D002214 ORTHO05D005113 8.2e-22 107.5 96 56.2
Nitab4.5_0001244g0050 Nicotiana tabacum HOM05D002214 ORTHO05D005113 8.2e-22 107.5 95 57.9
Oeu047606.1 Olea europaea HOM05D002214 ORTHO05D005113 8.2e-22 107.5 98 58.2
Aqoxy2G02029 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 1.1e-21 107.1 95 55.8
Dinv43403 Davidia involucrata HOM05D002214 ORTHO05D005113 1.1e-21 107.1 93 59.1
ECA233G5526 Erigeron canadensis HOM05D002214 ORTHO05D005113 1.1e-21 107.1 96 56.2
FAN01G2033 Fragaria x ananassa HOM05D002214 ORTHO05D005113 1.1e-21 107.1 95 55.8
Sc11g0009030 Simmondsia chinensis HOM05D002214 ORTHO05D005113 1.1e-21 107.1 101 55.4
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.4e-21 106.7 94 58.5
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla HOM05D002214 ORTHO05D005113 1.4e-21 106.7 95 56.8
MD02G1300400 Malus domestica HOM05D002214 ORTHO05D005113 1.4e-21 106.7 95 56.8
Sabra09G0041400 Salix brachista HOM05D002214 ORTHO05D005113 1.4e-21 106.7 95 58.9
Nitab4.5_0008942g0030 Nicotiana tabacum HOM05D002214 ORTHO05D005113 1.8e-21 106.3 95 57.9
Ah.10g038600 Amaranthus hybridus HOM05D002214 ORTHO05D005113 2.4e-21 105.9 94 57.4
Aqoxy1G00322 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 2.4e-21 105.9 95 54.7
CDE08G0672 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 2.4e-21 105.9 94 56.4
MD02G1300500 Malus domestica HOM05D002214 ORTHO05D005113 2.4e-21 105.9 95 56.8
Potri.001G261800 Populus trichocarpa HOM05D002214 ORTHO05D005113 2.4e-21 105.9 95 57.9
TAR633G1565 Trochodendron aralioides HOM05D002214 ORTHO05D005113 2.4e-21 105.9 95 56.8
CAN.G909.3 Capsicum annuum HOM05D002214 ORTHO05D005113 3.1e-21 105.5 112 50.0
Sed0022614 Sechium edule HOM05D002214 ORTHO05D005113 3.1e-21 105.5 101 53.5
Solyc01g087900.3 Solanum lycopersicum HOM05D002214 ORTHO05D005113 3.1e-21 105.5 95 55.8
Sopen01g034830 Solanum pennellii HOM05D002214 ORTHO05D005113 3.1e-21 105.5 95 55.8
PGSC0003DMG400006777 Solanum tuberosum HOM05D002214 ORTHO05D005113 3.1e-21 105.5 95 55.8
Gohir.D11G141700 Gossypium hirsutum HOM05D002214 ORTHO05D005113 4.1e-21 105.1 94 57.4
Gorai.007G152100 Gossypium raimondii HOM05D002214 ORTHO05D005113 4.1e-21 105.1 94 57.4
Migut.N01799 Erythranthe guttata HOM05D002214 ORTHO05D005113 5.3e-21 104.8 101 51.5
EL10Ac2g04370 Beta vulgaris HOM05D002214 ORTHO05D005113 6.9e-21 104.4 94 56.4
BcaC04g24254 Brassica carinata HOM05D002214 ORTHO05D005113 6.9e-21 104.4 102 53.9
Duzib138G1825 Durio zibethinus HOM05D002214 ORTHO05D005113 6.9e-21 104.4 95 55.8
SEGI_02460 Sequoiadendron giganteum HOM05D002214 ORTHO05D005113 6.9e-21 104.4 95 55.8
ATR0322G021 Amborella trichopoda HOM05D002214 ORTHO05D005113 9.1e-21 104.0 94 55.3
Nitab4.5_0000087g0120 Nicotiana tabacum HOM05D002214 ORTHO05D005113 9.1e-21 104.0 95 56.8
Nitab4.5_0001676g0100 Nicotiana tabacum HOM05D002214 ORTHO05D005113 9.1e-21 104.0 95 56.8
TWI09G0624 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 9.1e-21 104.0 95 57.9
Peaxi162Scf00071g01032 Petunia axillaris HOM05D002214 ORTHO05D005113 2.6e-20 102.4 95 55.8
CDE02G0928 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 3.4e-20 102.1 94 55.3
CBR_g48990 Chara braunii HOM05D002214 ORTHO05D005113 1.0e-19 100.5 95 53.7
SGA_v2.0_scaffold4G02481 Striga asiatica HOM05D002214 ORTHO05D005113 1.0e-19 100.5 112 50.9
vmacro17359 Vaccinium macrocarpon HOM05D002214 ORTHO05D005113 1.3e-19 100.1 115 49.6
BcaC08g43425 Brassica carinata HOM05D002214 ORTHO05D005113 1.7e-19 99.8 104 54.8
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea HOM05D002214 ORTHO05D005113 2.9e-19 99.0 124 46.8
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis HOM05D002214 ORTHO05D005113 3.8e-19 98.6 100 50.0
Sc11g0003930 Simmondsia chinensis HOM05D002214 ORTHO05D005113 1.1e-18 97.1 101 51.5
DCAR_022372 Daucus carota HOM05D002214 ORTHO05D005113 3.2e-18 95.5 94 53.2
Pp3c7_5970 Physcomitrium patens HOM05D002214 ORTHO05D005113 4.2e-18 95.1 98 50.0
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea HOM05D002214 ORTHO05D005113 7.2e-18 94.4 137 42.3
SMO137G0156 Selaginella moellendorffii HOM05D002214 ORTHO05D005113 1.2e-17 93.6 88 53.4
Cre08.g364450 Chlamydomonas reinhardtii HOM05D002214 ORTHO05D005113 1.6e-17 93.2 89 50.6
Mapoly0014s0153 Marchantia polymorpha HOM05D002214 ORTHO05D005113 1.6e-17 93.2 88 52.3
Lj7C576T11 Lonicera japonica HOM05D002214 ORTHO05D005113 2.1e-17 92.8 105 49.5
Oeu014596.2 Olea europaea HOM05D002214 ORTHO05D005113 3.6e-17 92.0 139 41.0
Zm00001eb431690 Zea mays HOM05D002214 ORTHO05D005113 3.6e-17 92.0 96 52.1
PSO384G2386 Papaver somniferum HOM05D002214 ORTHO05D005113 4.7e-17 91.7 81 58.0
Zm00001eb069290 Zea mays HOM05D002214 ORTHO05D005113 4.7e-17 91.7 96 52.1
Os04g0635800 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D005113 8.0e-17 90.9 96 52.1
MCO11G341 Micromonas commoda HOM05D002214 ORTHO05D005113 2.3e-16 89.4 87 51.7
Cfa022421 Carpinus fangiana HOM05D002214 ORTHO05D005113 7.4e-15 84.3 94 48.9
MD07G1016300 Malus domestica HOM05D002214 ORTHO05D005113 9.7e-15 84.0 73 57.5
MD07G1016800 Malus domestica HOM05D002214 ORTHO05D005113 9.7e-15 84.0 73 57.5
PRCOL_00004224 Prasinoderma coloniale HOM05D002214 ORTHO05D005113 1.3e-14 83.6 104 43.3
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 2.4e-13 79.3 91 46.2
HPP92_012859 Vanilla planifolia HOM05D002214 ORTHO05D005113 3.5e-12 75.5 95 46.3
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea HOM05D002214 ORTHO05D005113 4.5e-12 75.1 73 54.8
DCAR_022374 Daucus carota HOM05D002214 ORTHO05D005113 1.2e-09 67.0 65 53.8
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 4.7e-09 65.1 91 41.8
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 4.7e-09 65.1 91 38.5
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 3.0e-08 62.4 91 39.6
MSTRG.12560 Avicennia marina HOM05D005702 ORTHO05D007080 6.7e-08 61.2 91 40.7
arahy.Tifrunner.gnm1.ann1.Y5766G Arachis hypogaea HOM05D002214 ORTHO05D009715 2.6e-07 59.3 59 50.8
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea HOM05D002214 ORTHO05D005113 4.4e-07 58.5 60 51.7
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea HOM05D002214 ORTHO05D005113 4.4e-07 58.5 54 53.7
Medtr3g030055 Medicago truncatula HOM05D002214 ORTHO05D005113 1.3e-06 57.0 93 41.9
Pp3c18_3810 Physcomitrium patens HOM05D002214 ORTHO05D005113 1.7e-06 56.6 68 45.6


User provided reference genes

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