Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2274 Papaver somniferum HOM05D003503 ORTHO05D003885 6.2e-138 494.2 261 100.0
PSO339G6426 Papaver somniferum HOM05D003503 ORTHO05D003885 2.5e-123 445.7 262 91.2
TAR369G0624 Trochodendron aralioides HOM05D003503 ORTHO05D001307 3.5e-40 169.5 267 48.3
Actinidia17255 Actinidia chinensis HOM05D003503 ORTHO05D003885 9.5e-38 161.4 265 43.4
Aa31LG1G24010 Aethionema arabicum HOM05D003503 ORTHO05D003885 6.1e-37 158.7 267 42.3
Nn2g15511 Nelumbo nucifera HOM05D003503 ORTHO05D003885 1.0e-36 157.9 199 49.2
AT2G42260 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 5.2e-36 155.6 267 42.3
CiPaw.10G029000 Carya illinoinensis HOM05D003503 ORTHO05D003885 1.7e-34 150.6 266 42.1
DCAR_024103 Daucus carota HOM05D003503 ORTHO05D003885 1.7e-34 150.6 212 48.1
DCAR_024104 Daucus carota HOM05D003503 ORTHO05D003885 2.9e-34 149.8 271 42.1
CAN.G128.30 Capsicum annuum HOM05D003503 ORTHO05D003885 6.4e-34 148.7 266 42.1
SalBow6G1355 Salvia bowleyana HOM05D003503 ORTHO05D003885 8.3e-34 148.3 275 42.2
QL07p023685 Quercus lobata HOM05D003503 ORTHO05D003885 1.1e-33 147.9 265 40.0
CARHR137300 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.4e-33 147.5 269 40.1
Sp4g24440 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.8e-33 147.1 266 41.7
Thhalv10017150m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 2.4e-33 146.7 263 40.3
PGSC0003DMG402023713 Solanum tuberosum HOM05D003503 ORTHO05D003885 2.4e-33 146.7 267 41.2
THA.LOC104824461 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 2.4e-33 146.7 269 43.9
Hma1.2p1_0174F.1_g077040 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 5.4e-33 145.6 268 41.4
Actinidia38570 Actinidia chinensis HOM05D003503 ORTHO05D003885 9.2e-33 144.8 264 40.9
Carub.0004s2460 Capsella rubella HOM05D003503 ORTHO05D003885 9.2e-33 144.8 266 40.6
THA.LOC104802399 Tarenaya hassleriana HOM05D003503 ORTHO05D003885 1.2e-32 144.4 219 47.0
Cc06_g16370 Coffea canephora HOM05D003503 ORTHO05D003885 2.7e-32 143.3 284 39.1
Solyc10g080400.2 Solanum lycopersicum HOM05D003503 ORTHO05D003885 3.5e-32 142.9 267 40.4
Sopen10g030940 Solanum pennellii HOM05D003503 ORTHO05D003885 3.5e-32 142.9 267 40.4
TWI74G1092 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 7.8e-32 141.7 274 39.8
QL07p023657 Quercus lobata HOM05D003503 ORTHO05D003885 1.0e-31 141.4 284 40.1
Nitab4.5_0010571g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.7e-31 140.6 274 40.5
Actinidia20299 Actinidia chinensis HOM05D003503 ORTHO05D003885 3.0e-31 139.8 173 49.1
Hma1.2p1_0640F.1_g194090 Hydrangea macrophylla HOM05D003503 ORTHO05D003885 3.9e-31 139.4 200 47.0
Potri.006G057800 Populus trichocarpa HOM05D003503 ORTHO05D003885 8.6e-31 138.3 239 41.8
MD12G1062400 Malus domestica HOM05D003503 ORTHO05D003885 2.5e-30 136.7 213 42.7
CSS0007658 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 5.6e-30 135.6 272 39.7
Nitab4.5_0000016g0070 Nicotiana tabacum HOM05D003503 ORTHO05D003885 5.6e-30 135.6 268 40.7
Prupe.7G071700 Prunus persica HOM05D003503 ORTHO05D003885 7.3e-30 135.2 224 42.4
Sabra06G0041000 Salix brachista HOM05D003503 ORTHO05D003885 9.5e-30 134.8 170 48.8
Potri.016G050300 Populus trichocarpa HOM05D003503 ORTHO05D003885 1.2e-29 134.4 271 39.9
Ciclev10005700m.g Citrus clementina HOM05D003503 ORTHO05D003885 1.6e-29 134.0 274 38.7
GSVIVG01033358001 Vitis vinifera HOM05D003503 ORTHO05D003885 1.6e-29 134.0 264 42.0
CiPaw.09G033400 Carya illinoinensis HOM05D003503 ORTHO05D003885 2.1e-29 133.7 268 38.8
Cfa016885 Carpinus fangiana HOM05D003503 ORTHO05D003885 2.8e-29 133.3 264 39.8
PSO541G0601 Papaver somniferum HOM05D003503 ORTHO05D003885 4.7e-29 132.5 287 39.7
PSO675G0055 Papaver somniferum HOM05D003503 ORTHO05D003885 6.2e-29 132.1 286 39.5
Eucgr.A02419 Eucalyptus grandis HOM05D003503 ORTHO05D003885 1.4e-28 131.0 265 40.4
Thecc.05G166300 Theobroma cacao HOM05D003503 ORTHO05D003885 1.8e-28 130.6 226 45.1
MD14G1063100 Malus domestica HOM05D003503 ORTHO05D003885 3.1e-28 129.8 187 47.6
Dinv18112 Davidia involucrata HOM05D003503 ORTHO05D003885 4.0e-28 129.4 273 38.8
Peaxi162Scf00258g00220 Petunia axillaris HOM05D003503 ORTHO05D003885 8.9e-28 128.3 265 38.1
Nitab4.5_0004063g0080 Nicotiana tabacum HOM05D003503 ORTHO05D003885 1.2e-27 127.9 262 36.6
Sabra16G0053800 Salix brachista HOM05D003503 ORTHO05D003885 1.2e-27 127.9 204 44.6
Atru.chr1.937 Acer truncatum HOM05D003503 ORTHO05D003885 1.5e-27 127.5 189 47.6
Migut.K00058 Erythranthe guttata HOM05D003503 ORTHO05D003885 1.5e-27 127.5 273 35.9
Haze_19934 Corylus avellana HOM05D003503 ORTHO05D003885 2.6e-27 126.7 263 39.9
Dinv24108 Davidia involucrata HOM05D003503 ORTHO05D000616 2.6e-27 126.7 266 39.1
Cfa020096 Carpinus fangiana HOM05D003503 ORTHO05D003885 3.4e-27 126.3 264 39.4
CSS0013310 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 4.4e-27 125.9 179 45.3
Manes.03G008800 Manihot esculenta HOM05D003503 ORTHO05D003885 5.8e-27 125.6 272 42.3
Rhsim04G0098700 Rhododendron simsii HOM05D003503 ORTHO05D003885 5.8e-27 125.6 304 35.9
FAN23G1753 Fragaria x ananassa HOM05D003503 ORTHO05D003885 9.8e-27 124.8 263 41.4
FAN23G2494 Fragaria x ananassa HOM05D003503 ORTHO05D003885 9.8e-27 124.8 263 41.4
FvH4_1g24920 Fragaria vesca HOM05D003503 ORTHO05D003885 1.3e-26 124.4 262 40.8
FAN26G0276 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-26 124.4 260 40.8
FAN26G0411 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.3e-26 124.4 260 40.8
HanXRQChr06g0176361 Helianthus annuus HOM05D003503 ORTHO05D003885 2.9e-26 123.2 170 48.8
TAR633G0309 Trochodendron aralioides HOM05D000064 ORTHO05D003885 3.7e-26 122.9 208 45.2
Haze_20095 Corylus avellana HOM05D003503 ORTHO05D003885 1.1e-25 121.3 285 37.2
Peaxi162Scf00406g00711 Petunia axillaris HOM05D003503 ORTHO05D003885 1.1e-25 121.3 201 44.8
Gorai.007G361800 Gossypium raimondii HOM05D003503 ORTHO05D003885 1.9e-25 120.6 271 40.6
FAN02G2343 Fragaria x ananassa HOM05D003503 ORTHO05D003885 2.4e-25 120.2 263 40.3
Nitab4.5_0006853g0010 Nicotiana tabacum HOM05D003503 ORTHO05D003885 2.4e-25 120.2 192 42.2
RcHm_v2.0_Chr3g0473161 Rosa chinensis HOM05D003503 ORTHO05D003885 2.4e-25 120.2 173 49.1
Peaxi162Scf00285g00427 Petunia axillaris HOM05D003503 ORTHO05D003885 3.2e-25 119.8 264 36.7
SGA_v2.0_scaffold69G23080 Striga asiatica HOM05D003503 ORTHO05D003885 3.2e-25 119.8 272 37.9
FAN19G1882 Fragaria x ananassa HOM05D003503 ORTHO05D003885 5.4e-25 119.0 258 39.9
Duzib128G0723 Durio zibethinus HOM05D003503 ORTHO05D003885 7.0e-25 118.6 272 39.7
FvH4_6g18600 Fragaria vesca HOM05D003503 ORTHO05D003885 7.0e-25 118.6 218 44.5
FAN14G4545 Fragaria x ananassa HOM05D003503 ORTHO05D003885 7.0e-25 118.6 218 44.5
Lju124A33T34 Lonicera japonica HOM05D003503 ORTHO05D003885 7.0e-25 118.6 249 40.2
Manes.16G129700 Manihot esculenta HOM05D003503 ORTHO05D003885 7.0e-25 118.6 188 45.2
COL.COLO4_28742 Corchorus olitorius HOM05D003503 ORTHO05D003885 2.0e-24 117.1 186 46.8
AL5G39520 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 2.7e-24 116.7 264 40.9
MSTRG.10833 Avicennia marina HOM05D003503 ORTHO05D003885 3.5e-24 116.3 159 43.4
BcaC07g40334 Brassica carinata HOM05D003503 ORTHO05D003885 3.5e-24 116.3 199 45.2
PGR004G1207 Punica granatum HOM05D003503 ORTHO05D003885 4.6e-24 115.9 267 36.0
FAN05G4212 Fragaria x ananassa HOM05D003503 ORTHO05D003885 6.0e-24 115.5 221 41.6
RcHm_v2.0_Chr3g0473181 Rosa chinensis HOM05D003503 ORTHO05D003885 7.8e-24 115.2 174 46.6
Sed0025913 Sechium edule HOM05D003503 ORTHO05D003885 7.8e-24 115.2 264 37.5
FAN05G1437 Fragaria x ananassa HOM05D003503 ORTHO05D003885 1.0e-23 114.8 263 40.7
Gohir.D11G331100 Gossypium hirsutum HOM05D003503 ORTHO05D003885 1.0e-23 114.8 271 39.9
A09p50720 Brassica napus HOM05D003503 ORTHO05D003885 1.3e-23 114.4 209 44.0
CANSAT80G0280 Cannabis sativa HOM05D003503 ORTHO05D003885 1.3e-23 114.4 282 37.9
Thecc.06G029500 Theobroma cacao HOM05D003503 ORTHO05D003885 1.3e-23 114.4 230 39.6
C08p33430 Brassica napus HOM05D003503 ORTHO05D003885 2.3e-23 113.6 197 44.7
CANSAT80G2578 Cannabis sativa HOM05D003503 ORTHO05D003885 2.3e-23 113.6 282 37.9
Cpa.g.sc85.98 Carica papaya HOM05D003503 ORTHO05D003885 2.3e-23 113.6 271 38.7
Gohir.A11G313900 Gossypium hirsutum HOM05D003503 ORTHO05D003885 2.3e-23 113.6 271 39.5
Duzib106G0586 Durio zibethinus HOM05D003503 ORTHO05D003885 3.0e-23 113.2 174 44.8
VMungo1383G2219 Vigna mungo HOM05D003503 ORTHO05D003885 3.0e-23 113.2 184 41.3
Aa31LG10G12570 Aethionema arabicum HOM05D003503 ORTHO05D003885 3.9e-23 112.8 269 39.0
AT3G57860 Arabidopsis thaliana HOM05D003503 ORTHO05D003885 3.9e-23 112.8 185 42.7
CSS0023140 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 3.9e-23 112.8 209 38.3
FAN09G1919 Fragaria x ananassa HOM05D003503 ORTHO05D003885 3.9e-23 112.8 264 40.2
vmacro09100 Vaccinium macrocarpon HOM05D003503 ORTHO05D003885 6.6e-23 112.1 315 34.3
Phvul.001G138700 Phaseolus vulgaris HOM05D003503 ORTHO05D003885 1.5e-22 110.9 185 41.6
Cpa.g.sc85.97 Carica papaya HOM05D003503 ORTHO05D003885 2.5e-22 110.2 269 34.6
Oeu033755.1 Olea europaea HOM05D003503 ORTHO05D003885 2.5e-22 110.2 266 37.2
A05p02800 Brassica napus HOM05D003503 ORTHO05D003885 5.6e-22 109.0 202 41.1
BraA05t19272Z Brassica rapa HOM05D003503 ORTHO05D003885 5.6e-22 109.0 202 41.1
Hund02580 Selenicereus undatus HOM05D003503 ORTHO05D003885 5.6e-22 109.0 214 39.3
HanXRQChr05g0132771 Helianthus annuus HOM05D003503 ORTHO05D003885 7.3e-22 108.6 242 38.0
Carub.0005s2470 Capsella rubella HOM05D003503 ORTHO05D003885 9.5e-22 108.2 275 36.0
Lalb_Chr18g0047601 Lupinus albus HOM05D003503 ORTHO05D003885 9.5e-22 108.2 190 43.2
CARHR168170 Cardamine hirsuta HOM05D003503 ORTHO05D003885 1.2e-21 107.8 197 41.6
Glyma.03G141800 Glycine max HOM05D003503 ORTHO05D003885 1.2e-21 107.8 200 39.5
BcaC02g12471 Brassica carinata HOM05D003503 ORTHO05D003885 1.6e-21 107.5 159 44.0
BcaNung05887 Brassica carinata HOM05D003503 ORTHO05D003885 1.6e-21 107.5 159 44.0
C04p03390 Brassica napus HOM05D003503 ORTHO05D003885 1.6e-21 107.5 159 44.0
MELO3C023180.2 Cucumis melo HOM05D003503 ORTHO05D003885 1.6e-21 107.5 267 37.5
CsaV3_4G010540 Cucumis sativus L. HOM05D003503 ORTHO05D003885 2.1e-21 107.1 267 37.5
BcaC07g40160 Brassica carinata HOM05D003503 ORTHO05D003885 2.8e-21 106.7 209 41.1
TWI53G0899 Tripterygium wilfordii HOM05D003503 ORTHO05D003885 2.8e-21 106.7 234 37.2
TAR629G2270 Trochodendron aralioides HOM05D003503 ORTHO05D003885 3.6e-21 106.3 136 48.5
ECA248G2321 Erigeron canadensis HOM05D003503 ORTHO05D003885 4.7e-21 105.9 186 44.6
Lsat_1_v5_gn_8_79401 Lactuca sativa HOM05D003503 ORTHO05D003885 4.7e-21 105.9 218 41.7
Psat3g070200 Pisum sativum HOM05D003503 ORTHO05D003885 4.7e-21 105.9 280 33.6
Aqoxy2G00107 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 8.1e-21 105.1 261 36.8
DCAR_020468 Daucus carota HOM05D003503 ORTHO05D003885 8.1e-21 105.1 261 36.4
BcaNung04400 Brassica carinata HOM05D003503 ORTHO05D003885 1.1e-20 104.8 187 40.6
BolC4t21976H Brassica oleracea HOM05D003503 ORTHO05D003885 1.4e-20 104.4 159 43.4
SHI33674 Sapria himalayana HOM05D003503 ORTHO05D003885 1.4e-20 104.4 190 41.1
Sp5g04860 Schrenkiella parvula HOM05D003503 ORTHO05D003885 1.8e-20 104.0 186 42.5
ECA248G0895 Erigeron canadensis HOM05D003503 ORTHO05D003885 4.0e-20 102.8 269 37.9
TPR.G4785 Trifolium pratense HOM05D003503 ORTHO05D003885 4.0e-20 102.8 206 40.3
MSTRG.26098 Avicennia marina HOM05D003503 ORTHO05D003885 5.2e-20 102.4 265 35.1
ClCG04G000340 Citrullus lanatus HOM05D003503 ORTHO05D003885 5.2e-20 102.4 188 42.0
Lj1g0016608 Lotus japonicus HOM05D003503 ORTHO05D003885 6.8e-20 102.1 214 37.4
Hund02582 Selenicereus undatus HOM05D003503 ORTHO05D003885 6.8e-20 102.1 266 35.7
HanXRQChr15g0483571 Helianthus annuus HOM05D003503 ORTHO05D003885 2.0e-19 100.5 172 43.0
CSS0045770 Camellia sinensis var. sinensis HOM05D003503 ORTHO05D003885 2.6e-19 100.1 170 42.9
Medtr7g092570 Medicago truncatula HOM05D003503 ORTHO05D003885 2.6e-19 100.1 181 40.9
BcaC07g40221 Brassica carinata HOM05D003503 ORTHO05D003885 5.8e-19 99.0 208 39.4
AUR62021551 Chenopodium quinoa HOM05D003503 ORTHO05D003885 5.8e-19 99.0 213 37.1
Aqoxy2G00088 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 7.5e-19 98.6 267 36.0
Aqoxy2G00125 Aquilegia oxysepala HOM05D003503 ORTHO05D003885 7.5e-19 98.6 261 34.1
Thhalv10006194m.g Eutrema salsugineum HOM05D003503 ORTHO05D003885 7.5e-19 98.6 184 41.8
Lalb_Chr15g0078851 Lupinus albus HOM05D003503 ORTHO05D003885 7.5e-19 98.6 163 44.2
EL10Ac5g11139 Beta vulgaris HOM05D003503 ORTHO05D003885 8.3e-18 95.1 263 34.6
Sed0010654 Sechium edule HOM05D003503 ORTHO05D003885 8.3e-18 95.1 267 36.3
SalBow1G6809 Salvia bowleyana HOM05D003503 ORTHO05D003885 3.2e-17 93.2 145 44.8
AUR62008542 Chenopodium quinoa HOM05D003503 ORTHO05D003885 9.2e-17 91.7 253 34.8
Glyma.19G144400 Glycine max HOM05D003503 ORTHO05D003885 9.2e-17 91.7 214 35.5
Sc19g0006890 Simmondsia chinensis HOM05D003503 ORTHO05D003885 2.1e-16 90.5 276 33.7
Hund02581 Selenicereus undatus HOM05D003503 ORTHO05D003885 3.5e-16 89.7 192 34.4
EL10Ac3g06131 Beta vulgaris HOM05D003503 ORTHO05D003885 6.0e-16 89.0 213 39.0
AUR62002437 Chenopodium quinoa HOM05D003503 ORTHO05D003885 3.0e-15 86.7 172 39.0
AUR62023750 Chenopodium quinoa HOM05D003503 ORTHO05D003885 3.0e-15 86.7 172 39.0
Ah.13g073290 Amaranthus hybridus HOM05D003503 ORTHO05D003885 3.9e-15 86.3 167 40.1
Ca_08494_v3 Cicer arietinum L. HOM05D003503 ORTHO05D003885 8.6e-15 85.1 179 36.9
AL4G40620 Arabidopsis lyrata HOM05D003503 ORTHO05D003885 1.1e-14 84.7 109 47.7
arahy.Tifrunner.gnm1.ann1.P0WGR4 Arachis hypogaea HOM05D003503 ORTHO05D003885 4.3e-14 82.8 183 36.6
arahy.Tifrunner.gnm1.ann1.E4BIS3 Arachis hypogaea HOM05D003503 ORTHO05D003885 7.3e-14 82.0 235 33.2
MBI04_g14263_MAGBIO Magnolia biondii HOM05D000102 ORTHO05D000138 6.2e-13 79.0 193 38.9
MBI01_g36437_MAGBIO Magnolia biondii HOM05D003503 ORTHO05D003885 8.9e-12 75.1 234 29.5
BcaC01g05380 Brassica carinata HOM05D003503 ORTHO05D003885 1.2e-11 74.7 224 31.7
Ah.02g114090 Amaranthus hybridus HOM05D000622 ORTHO05D000475 2.0e-11 73.9 201 33.3
BcaB01g03443 Brassica carinata HOM05D002899 ORTHO05D003885 2.4e-09 67.0 71 52.1
HanXRQChr06g0172301 Helianthus annuus HOM05D003503 ORTHO05D003885 1.6e-08 64.3 70 51.4
PGR031G3517 Punica granatum HOM05D003503 ORTHO05D003885 2.1e-08 63.9 369 29.8
Migut.J01803 Erythranthe guttata HOM05D003503 ORTHO05D003885 2.7e-08 63.5 62 51.6
Os04g0472700 Oryza sativa ssp. japonica HOM05D003503 ORTHO05D003885 6.0e-08 62.4 196 31.1
SGA_v2.0_scaffold105G30470 Striga asiatica HOM05D003503 ORTHO05D003885 1.0e-07 61.6 204 33.3
Actinidia09377 Actinidia chinensis HOM05D003503 ORTHO05D003885 1.3e-07 61.2 65 49.2
PGR031G2261 Punica granatum HOM05D003503 ORTHO05D003885 6.6e-07 58.9 98 38.8
Zm00001eb245710 Zea mays HOM05D020767 ORTHO05D003885 8.6e-07 58.5 202 31.7
C07p14610 Brassica napus HOM05D003503 ORTHO05D003885 1.1e-06 58.2 161 32.9
SalBow1G6855 Salvia bowleyana HOM05D003503 ORTHO05D003885 1.5e-06 57.8 44 63.6
Os02g0591500 Oryza sativa ssp. japonica HOM05D020767 ORTHO05D003885 1.9e-06 57.4 226 28.3
Zm00001eb079910 Zea mays HOM05D003503 ORTHO05D003885 2.5e-06 57.0 224 30.4
CDE05G1889 Ceratophyllum demersum HOM05D003503 ORTHO05D003885 5.6e-06 55.8 196 30.6


User provided reference genes

Program Settings