Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2242 Papaver somniferum HOM05D007819 ORTHO05D009848 2.3e-162 575.5 281 100.0
PSO339G1273 Papaver somniferum HOM05D007819 ORTHO05D009848 2.4e-156 555.4 281 96.4
Nn2g10668 Nelumbo nucifera HOM05D007819 ORTHO05D009848 2.4e-124 449.1 257 80.9
TAR623G0280 Trochodendron aralioides HOM05D007819 ORTHO05D009848 5.5e-124 448.0 257 80.9
Manes.04G025500 Manihot esculenta HOM05D007819 ORTHO05D009848 1.0e-122 443.7 282 74.1
TWI75G0698 Tripterygium wilfordii HOM05D007819 ORTHO05D009848 1.5e-121 439.9 259 80.3
CANSAT54G2163 Cannabis sativa HOM05D007819 ORTHO05D009848 8.2e-120 434.1 258 79.8
Gohir.A09G105900 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.1e-119 433.7 258 78.3
Atru.chr3.3713 Acer truncatum HOM05D007819 ORTHO05D009848 1.4e-119 433.3 256 77.3
Gorai.006G121000 Gossypium raimondii HOM05D007819 ORTHO05D009848 4.0e-119 431.8 259 78.4
Cpa.g.sc318.6 Carica papaya HOM05D007819 ORTHO05D009848 1.2e-118 430.3 270 73.0
Duzib168G1088 Durio zibethinus HOM05D007819 ORTHO05D009848 7.6e-118 427.6 283 71.7
Thecc.09G261200 Theobroma cacao HOM05D007819 ORTHO05D009848 7.6e-118 427.6 282 71.6
PGR102G1079 Punica granatum HOM05D007819 ORTHO05D009848 8.4e-117 424.1 269 73.6
RcHm_v2.0_Chr5g0060991 Rosa chinensis HOM05D007819 ORTHO05D009848 2.5e-116 422.5 257 77.0
Gohir.D09G102600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.2e-115 420.2 248 79.0
Oeu017391.1 Olea europaea HOM05D007819 ORTHO05D009848 2.7e-115 419.1 255 76.5
Sopen06g001100 Solanum pennellii HOM05D007819 ORTHO05D009848 2.7e-115 419.1 262 72.9
FAN21G3467 Fragaria x ananassa HOM05D007819 ORTHO05D009848 3.5e-115 418.7 248 77.8
COL.COLO4_25254 Corchorus olitorius HOM05D007819 ORTHO05D009848 1.0e-114 417.2 247 76.9
Eucgr.B02464 Eucalyptus grandis HOM05D007819 ORTHO05D009848 1.3e-114 416.8 246 77.6
FAN25G2530 Fragaria x ananassa HOM05D007819 ORTHO05D009848 8.7e-114 414.1 248 76.6
Migut.N02626 Erythranthe guttata HOM05D007819 ORTHO05D009848 1.1e-113 413.7 262 73.3
Cc01_g11630 Coffea canephora HOM05D007819 ORTHO05D009848 1.1e-111 407.1 246 75.2
MD11G1124900 Malus domestica HOM05D007819 ORTHO05D009848 5.3e-111 404.8 268 70.1
Gohir.D05G077600 Gossypium hirsutum HOM05D007819 ORTHO05D009848 1.2e-110 403.7 279 67.4
Gorai.009G079100 Gossypium raimondii HOM05D007819 ORTHO05D009848 1.2e-110 403.7 279 67.4
Lsat_1_v5_gn_2_25861 Lactuca sativa HOM05D007819 ORTHO05D009848 3.4e-110 402.1 240 77.1
Gohir.A05G074800 Gossypium hirsutum HOM05D007819 ORTHO05D009848 4.5e-110 401.7 279 67.4
Gohir.A05G074866 Gossypium hirsutum HOM05D007819 ORTHO05D009848 3.2e-108 395.6 279 66.3
MD03G1111000 Malus domestica HOM05D007819 ORTHO05D009848 2.1e-107 392.9 268 67.5
Nitab4.5_0007369g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 3.6e-107 392.1 281 67.3
CiPaw.13G106200 Carya illinoinensis HOM05D007819 ORTHO05D009848 3.9e-106 388.7 253 69.2
Hma1.2p1_2033F.1_g311900 Hydrangea macrophylla HOM05D007819 ORTHO05D009848 1.9e-105 386.3 244 72.1
FAN16G1444 Fragaria x ananassa HOM05D007819 ORTHO05D009848 4.1e-103 378.6 322 59.0
CiPaw.14G077700 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.3e-103 378.3 261 67.0
Nitab4.5_0000888g0180 Nicotiana tabacum HOM05D007819 ORTHO05D009848 5.0e-101 371.7 279 63.1
CiPaw.14G077600 Carya illinoinensis HOM05D007819 ORTHO05D009848 4.2e-100 368.6 261 66.3
CiPaw.13G106300 Carya illinoinensis HOM05D007819 ORTHO05D009848 5.5e-100 368.2 249 68.3
QL01p036876 Quercus lobata HOM05D007819 ORTHO05D009848 9.4e-100 367.5 265 64.2
AUR62006507 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.0e-98 364.0 310 58.1
DCAR_005475 Daucus carota HOM05D007819 ORTHO05D009848 4.8e-96 355.1 218 72.5
unitig_699.g19198 Utricularia gibba HOM05D007819 ORTHO05D009848 3.1e-95 352.4 269 62.1
FvH4_3g33520 Fragaria vesca HOM05D007819 ORTHO05D009848 2.6e-94 349.4 211 77.3
Lj1A183T52 Lonicera japonica HOM05D007819 ORTHO05D009848 1.4e-90 337.0 251 65.3
Mapoly0103s0031 Marchantia polymorpha HOM05D007819 ORTHO05D009848 1.4e-90 337.0 267 59.6
Sc21g0003720 Simmondsia chinensis HOM05D007819 ORTHO05D009848 5.7e-89 331.6 219 70.3
HPP92_025075 Vanilla planifolia HOM05D007819 ORTHO05D009848 1.7e-88 330.1 260 59.2
Zm00001eb013150 Zea mays HOM05D007819 ORTHO05D009848 3.1e-87 325.9 261 59.8
Peaxi162Scf00389g00619 Petunia axillaris HOM05D007819 ORTHO05D009848 4.2e-84 315.5 254 60.6
Ciclev10029813m.g Citrus clementina HOM05D007819 ORTHO05D009848 6.7e-82 308.1 258 59.3
Prupe.6G093600 Prunus persica HOM05D007819 ORTHO05D009848 2.8e-80 302.8 189 73.5
Haze_23935 Corylus avellana HOM05D007819 ORTHO05D009848 8.2e-80 301.2 206 69.9
Pp3c21_1570 Physcomitrium patens HOM05D007819 ORTHO05D009848 9.1e-79 297.7 261 54.0
SGA_v2.0_scaffold2G00920 Striga asiatica HOM05D007819 ORTHO05D009848 5.9e-78 295.0 234 62.0
Solyc06g005100.3 Solanum lycopersicum HOM05D007819 ORTHO05D009848 1.2e-75 287.3 179 70.4
Dinv32800 Davidia involucrata HOM05D007819 ORTHO05D009848 2.7e-75 286.2 188 71.3
Nitab4.5_0000022g0250 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.0e-75 284.6 213 66.7
Nitab4.5_0001578g0010 Nicotiana tabacum HOM05D007819 ORTHO05D009848 8.8e-74 281.2 232 57.8
CAN.G1171.1 Capsicum annuum HOM05D007819 ORTHO05D009848 2.2e-72 276.6 240 59.6
Pp3c9_23950 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.7e-69 266.9 254 48.8
Mapoly0155s0016 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.3e-69 266.5 254 48.8
Pp3c15_22830 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.5e-68 263.8 254 48.0
AagrBONN_evm.TU.Sc2ySwM_344.1297 Anthoceros agrestis HOM05D007819 ORTHO05D009848 1.9e-68 263.5 254 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3840 Anthoceros agrestis HOM05D007819 ORTHO05D009848 4.2e-68 262.3 254 49.6
Mapoly0008s0213 Marchantia polymorpha HOM05D007819 ORTHO05D009848 4.0e-66 255.8 254 48.0
Mapoly0035s0019 Marchantia polymorpha HOM05D007819 ORTHO05D009848 2.6e-65 253.1 263 45.2
GSVIVG01025124001 Vitis vinifera HOM05D007819 ORTHO05D009848 1.3e-64 250.8 187 63.6
MSTRG.12613 Avicennia marina HOM05D007819 ORTHO05D009848 2.2e-64 250.0 156 72.4
PGSC0003DMG401025397 Solanum tuberosum HOM05D007819 ORTHO05D009848 8.3e-64 248.1 154 72.7
AUR62025022 Chenopodium quinoa HOM05D007819 ORTHO05D009848 1.1e-55 221.1 228 50.9
Mapoly0088s0067 Marchantia polymorpha HOM05D000370 ORTHO05D001335 1.4e-50 204.1 268 35.4
Migut.O00707 Erythranthe guttata HOM05D007819 ORTHO05D009848 2.6e-49 199.9 122 72.1
Pp3c12_18930 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.9e-47 193.7 269 33.8
Pp3c12_18938 Physcomitrium patens HOM05D000370 ORTHO05D009848 1.9e-47 193.7 269 33.8
Pp3c3_24540 Physcomitrium patens HOM05D007819 ORTHO05D009848 1.9e-47 193.7 269 33.5
EL10Ac9g22426 Beta vulgaris HOM05D007819 ORTHO05D009848 5.0e-45 185.7 145 62.1
MSTRG.12612 Avicennia marina HOM05D007819 ORTHO05D009848 1.1e-39 167.9 97 79.4
SalBow3G4000 Salvia bowleyana HOM05D007819 ORTHO05D009848 7.8e-38 161.8 104 72.1
QL01p036758 Quercus lobata HOM05D007819 ORTHO05D009848 2.8e-35 153.3 95 77.9
CSS0001112 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 4.4e-33 146.0 97 70.1
CSS0025937 Camellia sinensis var. sinensis HOM05D007819 ORTHO05D009848 4.4e-33 146.0 97 70.1
QL01p036766 Quercus lobata HOM05D007819 ORTHO05D009848 1.7e-32 144.1 100 67.0
Os03g0287100 Oryza sativa ssp. japonica HOM05D007819 ORTHO05D009848 1.5e-28 131.0 103 57.3
Oeu012676.1 Olea europaea HOM05D007819 ORTHO05D009848 4.7e-27 125.9 74 75.7
EL10Ac9g22427 Beta vulgaris HOM05D007819 ORTHO05D009848 4.2e-23 112.8 118 49.2
FAN11G3664 Fragaria x ananassa HOM05D007819 ORTHO05D009848 2.5e-20 103.6 66 77.3
CiPaw.09G094500 Carya illinoinensis HOM05D007819 ORTHO05D009848 2.4e-10 70.5 44 70.5
AagrBONN_evm.TU.Sc2ySwM_117.2524 Anthoceros agrestis HOM05D007819 ORTHO05D009848 9.9e-09 65.1 50 50.0


User provided reference genes

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