Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 1.5e-186 656.0 328 100.0
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 7.7e-170 600.5 327 92.4
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.2e-115 419.1 311 66.9
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 2.0e-109 399.8 328 62.2
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 7.6e-109 397.9 320 61.9
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.1e-106 389.8 313 62.6
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.1e-102 377.5 320 59.4
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 1.4e-102 377.1 314 59.2
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 2.6e-101 372.9 311 59.8
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.6e-101 372.9 313 58.5
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 3.4e-101 372.5 308 59.7
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 7.6e-101 371.3 305 60.0
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 7.6e-101 371.3 308 59.4
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 4.9e-100 368.6 308 58.1
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 4.2e-99 365.5 309 57.9
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 5.4e-99 365.2 310 58.1
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.2e-98 364.0 308 59.1
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 2.1e-98 363.2 309 58.3
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 2.1e-98 363.2 306 60.5
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 2.7e-98 362.8 308 58.1
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 2.7e-98 362.8 310 59.4
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 4.6e-98 362.1 308 59.1
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 4.6e-98 362.1 333 56.5
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 7.8e-98 361.3 325 56.9
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 7.8e-98 361.3 304 60.5
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 1.3e-97 360.5 307 60.3
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 2.3e-97 359.8 305 58.0
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 2.3e-97 359.8 313 56.5
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 3.9e-97 359.0 305 58.7
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 3.9e-97 359.0 309 56.6
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 5.1e-97 358.6 303 58.1
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 5.1e-97 358.6 308 58.8
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 1.1e-96 357.5 307 57.3
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.9e-96 356.7 308 58.1
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 3.3e-96 355.9 308 57.8
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.6e-95 353.6 310 57.4
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 2.1e-95 353.2 310 56.8
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 3.6e-95 352.4 310 56.5
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.1e-94 350.9 308 57.5
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.4e-94 350.5 300 59.0
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.4e-94 349.7 323 52.6
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 5.3e-94 348.6 309 56.6
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 9.0e-94 347.8 309 56.0
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 9.0e-94 347.8 314 55.7
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 1.2e-93 347.4 323 56.3
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.2e-93 347.4 310 57.1
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 2.0e-93 346.7 311 57.9
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.7e-92 343.6 311 53.7
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.9e-92 342.8 309 57.0
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 4.9e-92 342.0 292 58.6
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.4e-91 340.5 311 56.3
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 1.4e-91 340.5 309 56.3
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 3.2e-91 339.3 304 56.2
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.2e-91 339.0 315 54.9
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 5.4e-91 338.6 304 56.2
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 5.4e-91 338.6 304 56.2
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.4e-91 338.6 310 55.2
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 7.1e-91 338.2 304 55.6
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 1.2e-90 337.4 311 55.3
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 1.6e-90 337.0 304 55.3
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 3.5e-90 335.9 291 57.0
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 4.6e-90 335.5 309 54.7
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 6.0e-90 335.1 295 55.9
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 6.0e-90 335.1 313 52.4
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 6.6e-89 331.6 308 54.9
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 8.7e-89 331.3 305 56.4
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 8.7e-89 331.3 303 55.1
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.9e-88 330.1 307 53.7
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 1.9e-88 330.1 302 57.0
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.5e-88 329.7 304 54.9
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.5e-88 329.7 304 54.9
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 4.8e-87 325.5 303 53.5
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 1.4e-86 323.9 275 59.3
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.3e-86 322.0 319 53.3
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.0e-85 320.1 324 53.7
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 1.7e-84 317.0 303 51.8
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 2.4e-83 313.2 269 59.5
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 2.7e-82 309.7 272 60.3
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 2.7e-82 309.7 304 51.3
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 4.6e-82 308.9 314 50.3
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.3e-81 307.4 281 55.2
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 5.1e-81 305.4 323 52.0
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 5.1e-81 305.4 309 53.1
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 1.5e-77 293.9 325 50.8
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 1.0e-76 291.2 258 56.2
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 1.7e-76 290.4 228 63.2
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.5e-75 285.4 275 53.5
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.6e-74 283.9 272 54.0
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.5e-74 282.7 253 61.7
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 4.1e-70 269.2 224 58.5
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 1.2e-69 267.7 263 52.9
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 2.6e-69 266.5 253 53.0
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 1.7e-68 263.8 242 57.4
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 7.2e-67 258.5 254 52.8
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 6.1e-66 255.4 221 57.5
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 5.0e-60 235.7 207 56.5
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 6.5e-60 235.3 221 54.3
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 1.4e-59 234.2 310 43.9
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 1.9e-59 233.8 317 42.6
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 5.5e-59 232.3 324 41.4
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 6.7e-57 225.3 315 43.8
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 4.4e-56 222.6 303 42.2
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.2e-53 214.5 306 40.2
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 3.4e-53 213.0 186 57.5
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 4.5e-53 212.6 231 47.6
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.1e-50 203.8 154 60.4
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 4.0e-41 172.9 171 55.0
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 7.5e-40 168.7 195 48.2
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 7.0e-38 162.2 155 51.6
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 5.9e-37 159.1 159 53.5
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 7.7e-37 158.7 105 72.4
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 3.8e-36 156.4 172 52.3
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 3.2e-35 153.3 113 61.1
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 2.7e-34 150.2 337 31.5
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 4.0e-33 146.4 182 44.5
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 9.8e-32 141.7 257 40.1
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.0e-25 120.2 165 41.8
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.2e-23 114.0 189 39.2
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 8.3e-23 112.1 145 44.8
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 1.6e-21 107.8 89 55.1
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.7e-20 104.4 145 42.1
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 5.6e-19 99.4 72 61.1
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.6e-18 97.8 192 35.9
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 6.1e-18 95.9 115 44.3
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 6.8e-17 92.4 74 58.1
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.0e-16 90.9 74 56.8
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 2.0e-13 80.9 169 33.1
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 7.8e-13 79.0 106 45.3
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 1.9e-11 74.3 72 47.2
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 5.8e-08 62.8 37 75.7


User provided reference genes

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