Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1635 Papaver somniferum HOM05D007535 ORTHO05D008520 1.3e-172 610.1 454 100.0
PSO339G0294 Papaver somniferum HOM05D007535 ORTHO05D008520 1.8e-145 520.0 455 86.6
Aqoxy4G02717 Aquilegia oxysepala HOM05D007535 ORTHO05D008520 4.6e-48 196.4 466 45.5
TAR633G1755 Trochodendron aralioides HOM05D007535 ORTHO05D008520 9.0e-44 182.2 458 56.1
vmacro03328 Vaccinium macrocarpon HOM05D007535 ORTHO05D008520 4.5e-43 179.9 477 45.3
Rhsim13G0113500 Rhododendron simsii HOM05D000001 ORTHO05D000003 1.6e-40 171.4 520 42.5
Lj2A969T70 Lonicera japonica HOM05D007535 ORTHO05D008520 1.1e-38 165.2 516 40.3
Thecc.09G278200 Theobroma cacao HOM05D007535 ORTHO05D008520 1.1e-38 165.2 500 43.6
SGA_v2.0_scaffold177G39436 Striga asiatica HOM05D007535 ORTHO05D008520 2.5e-38 164.1 472 52.1
Nn6g34805 Nelumbo nucifera HOM05D007535 ORTHO05D008520 3.3e-38 163.7 426 53.1
FAN21G0330 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.2e-35 155.2 478 45.4
Nitab4.5_0000731g0020 Nicotiana tabacum HOM05D007535 ORTHO05D008520 1.2e-35 155.2 455 53.8
Dinv08923 Davidia involucrata HOM05D007535 ORTHO05D008520 5.9e-35 152.9 468 40.4
CAN.G745.17 Capsicum annuum HOM05D007535 ORTHO05D008520 5.0e-34 149.8 489 49.3
Nitab4.5_0008177g0030 Nicotiana tabacum HOM05D007535 ORTHO05D008520 5.0e-34 149.8 457 51.2
Cc00_g20950 Coffea canephora HOM05D007535 ORTHO05D008520 6.1e-32 142.9 458 52.6
PGSC0003DMG400026347 Solanum tuberosum HOM05D007535 ORTHO05D008520 7.9e-32 142.5 512 48.6
Actinidia07260 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.3e-31 141.0 502 44.4
Solyc11g068690.2 Solanum lycopersicum HOM05D007535 ORTHO05D008520 3.9e-31 140.2 516 46.7
Sopen11g027410 Solanum pennellii HOM05D007535 ORTHO05D008520 3.9e-31 140.2 518 46.9
Peaxi162Scf00224g00216 Petunia axillaris HOM05D007535 ORTHO05D008520 5.1e-31 139.8 486 50.2
Psat5g257880 Pisum sativum HOM05D007535 ORTHO05D008520 1.5e-30 138.3 477 45.3
Gohir.D08G017000 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.0e-30 137.9 478 46.7
Prupe.6G137100 Prunus persica HOM05D007535 ORTHO05D008520 4.3e-30 136.7 496 48.0
Cfa009985 Carpinus fangiana HOM05D007535 ORTHO05D008520 2.8e-29 134.0 456 52.4
Gorai.004G011300 Gossypium raimondii HOM05D007535 ORTHO05D008520 1.8e-28 131.3 478 46.7
Gohir.A08G006800 Gossypium hirsutum HOM05D007535 ORTHO05D008520 2.6e-27 127.5 492 44.3
CSS0035480 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 1.3e-26 125.2 378 32.0
RcHm_v2.0_Chr5g0046091 Rosa chinensis HOM05D007535 ORTHO05D008520 1.3e-26 125.2 468 46.4
EL10Ac7g16124 Beta vulgaris HOM05D007535 ORTHO05D008520 2.9e-26 124.0 477 39.0
GSVIVG01036079001 Vitis vinifera HOM05D007535 ORTHO05D008520 2.9e-26 124.0 455 49.9
FvH4_3g25730 Fragaria vesca HOM05D007535 ORTHO05D008520 3.8e-26 123.6 475 47.8
MBI17_g01489_MAGBIO Magnolia biondii HOM05D007535 ORTHO05D008520 1.4e-25 121.7 456 43.2
Hma1.2p1_2164F.1_g315730 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.5e-25 120.9 271 38.4
Hma1.2p1_2164F.1_g315740 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 2.5e-25 120.9 271 38.4
FAN25G3072 Fragaria x ananassa HOM05D007535 ORTHO05D008520 5.5e-25 119.8 474 47.7
Cpa.g.sc195.29 Carica papaya HOM05D007535 ORTHO05D008520 1.2e-24 118.6 322 32.9
FAN11G3206 Fragaria x ananassa HOM05D007535 ORTHO05D008520 1.2e-24 118.6 473 47.1
Medtr2g086950 Medicago truncatula HOM05D007535 ORTHO05D008520 1.6e-24 118.2 474 47.3
Actinidia24230 Actinidia chinensis HOM05D007535 ORTHO05D008520 2.1e-24 117.9 243 57.2
Atru.chr3.3166 Acer truncatum HOM05D007535 ORTHO05D008520 4.7e-24 116.7 427 52.7
VMungo1080G1542 Vigna mungo HOM05D007535 ORTHO05D008520 1.8e-23 114.8 497 45.3
CDE02G4009 Ceratophyllum demersum HOM05D007535 ORTHO05D008520 2.3e-23 114.4 485 44.7
DCAR_024892 Daucus carota HOM05D007535 ORTHO05D008520 3.9e-23 113.6 490 38.0
Hund18777 Selenicereus undatus HOM05D007535 ORTHO05D008520 6.7e-23 112.8 495 38.0
Manes.04G001100 Manihot esculenta HOM05D007535 ORTHO05D008520 1.1e-22 112.1 508 42.9
HanXRQChr14g0433121 Helianthus annuus HOM05D007535 ORTHO05D008520 1.5e-22 111.7 456 49.1
Sc12g0004620 Simmondsia chinensis HOM05D007535 ORTHO05D008520 2.0e-22 111.3 482 38.4
Eucgr.J00525 Eucalyptus grandis HOM05D007535 ORTHO05D008520 2.6e-22 110.9 455 47.7
MELO3C025588.2 Cucumis melo HOM05D007535 ORTHO05D008520 4.4e-22 110.2 542 26.6
Migut.N02473 Erythranthe guttata HOM05D007535 ORTHO05D008520 4.4e-22 110.2 453 48.3
Haze_23344 Corylus avellana HOM05D007535 ORTHO05D008520 9.7e-22 109.0 325 33.5
Ca_01647_v3 Cicer arietinum L. HOM05D002184 ORTHO05D002379 1.3e-21 108.6 485 47.4
Sed0017293 Sechium edule HOM05D007535 ORTHO05D008520 2.8e-21 107.5 463 45.1
Lj3g0000707 Lotus japonicus HOM05D007535 ORTHO05D008520 4.8e-21 106.7 476 41.4
Lalb_Chr24g0393491 Lupinus albus HOM05D007535 ORTHO05D008520 6.3e-21 106.3 322 30.7
ClCG01G011770 Citrullus lanatus HOM05D007535 ORTHO05D008520 3.1e-20 104.0 488 43.4
PGR119G1786 Punica granatum HOM05D007535 ORTHO05D008520 5.3e-20 103.2 249 34.1
Lsat_1_v5_gn_2_34620 Lactuca sativa HOM05D007535 ORTHO05D008520 9.1e-20 102.4 460 43.5
Glyma.12G186700 Glycine max HOM05D007535 ORTHO05D008520 1.5e-19 101.7 482 46.1
SalBow3G0383 Salvia bowleyana HOM05D007535 ORTHO05D008520 2.6e-19 100.9 476 47.9
MD03G1150100 Malus domestica HOM05D007535 ORTHO05D008520 7.7e-19 99.4 492 44.7
Os01g0966400 Oryza sativa ssp. japonica HOM05D007535 ORTHO05D008520 1.0e-18 99.0 332 44.9
TPR.G4567 Trifolium pratense HOM05D007535 ORTHO05D008520 1.0e-18 99.0 488 46.3
ECA238G4833 Erigeron canadensis HOM05D007535 ORTHO05D008520 1.3e-18 98.6 456 38.8
Ciclev10028368m.g Citrus clementina HOM05D007535 ORTHO05D008520 5.0e-18 96.7 476 46.6
Glyma.13G314800 Glycine max HOM05D007535 ORTHO05D008520 5.0e-18 96.7 458 46.5
CANSAT54G2250 Cannabis sativa HOM05D007535 ORTHO05D008520 8.5e-18 95.9 474 45.8
TWI79G0866 Tripterygium wilfordii HOM05D007535 ORTHO05D008520 8.5e-18 95.9 489 46.2
Sc12g0004670 Simmondsia chinensis HOM05D007535 ORTHO05D008520 1.9e-17 94.7 475 37.7
Ciclev10029981m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.2e-16 92.0 486 36.0
Oeu024409.1 Olea europaea HOM05D007535 ORTHO05D008520 2.7e-16 90.9 62 72.6
arahy.Tifrunner.gnm1.ann1.TGP3GH Arachis hypogaea HOM05D007535 ORTHO05D008520 3.6e-16 90.5 500 34.8
AUR62001527 Chenopodium quinoa HOM05D007535 ORTHO05D008520 6.1e-16 89.7 510 36.7
unitig_27.g25117 Utricularia gibba HOM05D007535 ORTHO05D008520 6.1e-16 89.7 471 42.5
arahy.Tifrunner.gnm1.ann1.ETK20Z Arachis hypogaea HOM05D007535 ORTHO05D008520 6.7e-15 86.3 483 44.3
MSTRG.12377 Avicennia marina HOM05D007535 ORTHO05D008520 6.7e-15 86.3 508 44.5
Zm00001eb140080 Zea mays HOM05D007535 ORTHO05D008520 6.7e-15 86.3 480 47.5
CsaV3_1G015090 Cucumis sativus L. HOM05D007535 ORTHO05D008520 3.3e-14 84.0 483 43.3
Potri.004G199200 Populus trichocarpa HOM05D007535 ORTHO05D008520 5.7e-14 83.2 482 44.8
Hma1.2p1_2164F.1_g315720 Hydrangea macrophylla HOM05D007535 ORTHO05D008520 4.8e-13 80.1 59 67.8
THA.LOC104810927 Tarenaya hassleriana HOM05D007535 ORTHO05D008520 6.3e-13 79.7 462 45.7
HPP92_011495 Vanilla planifolia HOM05D007535 ORTHO05D008520 3.1e-12 77.4 460 37.0
Ciclev10028316m.g Citrus clementina HOM05D007535 ORTHO05D008520 1.2e-11 75.5 288 30.9
QL01p011831 Quercus lobata HOM05D007535 ORTHO05D008520 2.6e-11 74.3 407 48.4
Duzib150G0908 Durio zibethinus HOM05D007535 ORTHO05D008520 3.5e-11 73.9 230 31.3
Sabra04G0134300 Salix brachista HOM05D001716 ORTHO05D004234 2.2e-10 71.2 274 28.5
MD11G1168900 Malus domestica HOM05D007535 ORTHO05D008520 2.9e-10 70.9 166 49.4
CiPaw.14G097800 Carya illinoinensis HOM05D007535 ORTHO05D008520 9.4e-09 65.9 227 29.1
Nitab4.5_0001640g0010 Nicotiana tabacum HOM05D007535 ORTHO05D008520 3.6e-08 63.9 93 45.2
AUR62020256 Chenopodium quinoa HOM05D007535 ORTHO05D008520 8.0e-08 62.8 273 42.1
Phvul.005G122000 Phaseolus vulgaris HOM05D007535 ORTHO05D008520 5.2e-07 60.1 475 42.1
FAN16G1906 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.0e-06 58.2 261 25.3
FAN25G1573 Fragaria x ananassa HOM05D007535 ORTHO05D008520 2.0e-06 58.2 365 51.8
Aa31LG1G13230 Aethionema arabicum HOM05D012474 ORTHO05D008520 5.7e-06 56.6 253 28.5
CSS0011293 Camellia sinensis var. sinensis HOM05D007535 ORTHO05D008520 5.7e-06 56.6 42 64.3


User provided reference genes

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