Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 1.9e-152 542.3 254 100.0
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 2.6e-149 531.9 254 97.2
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 1.8e-142 509.2 254 92.9
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 1.7e-137 492.7 254 90.2
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 1.1e-136 490.0 254 90.2
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 4.3e-136 488.0 254 89.4
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 5.3e-134 481.1 254 88.6
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 1.6e-119 433.0 250 76.4
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 6.9e-118 427.6 232 81.5
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 2.6e-117 425.6 235 79.1
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 3.4e-117 425.2 253 75.9
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 7.6e-117 424.1 253 77.1
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 7.6e-117 424.1 233 79.4
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 1.0e-116 423.7 245 76.7
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 3.8e-116 421.8 253 76.7
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 6.5e-116 421.0 252 72.2
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 8.4e-116 420.6 240 78.8
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.1e-115 420.2 255 74.5
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 1.1e-115 420.2 253 74.7
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 1.4e-115 419.9 244 76.6
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 1.9e-115 419.5 252 75.0
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 2.5e-115 419.1 239 79.1
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 3.2e-115 418.7 249 75.9
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 9.3e-115 417.2 248 75.4
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 9.3e-115 417.2 241 75.9
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.7e-114 415.6 237 77.2
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 2.7e-114 415.6 249 75.9
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 2.7e-114 415.6 245 75.5
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 2.7e-114 415.6 250 73.2
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 3.5e-114 415.2 245 75.5
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 4.6e-114 414.8 249 74.7
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 6.0e-114 414.5 253 72.7
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 6.0e-114 414.5 249 73.9
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 7.9e-114 414.1 245 75.1
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.0e-113 413.7 245 75.1
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 1.0e-113 413.7 249 74.7
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.3e-113 413.3 239 76.6
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 1.3e-113 413.3 240 75.8
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 1.8e-113 412.9 252 73.4
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.8e-113 412.9 253 73.5
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.8e-113 412.9 245 75.1
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 1.8e-113 412.9 236 75.8
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 2.3e-113 412.5 256 72.3
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 2.3e-113 412.5 230 79.6
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 3.9e-113 411.8 254 73.6
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 3.9e-113 411.8 253 72.7
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 3.9e-113 411.8 239 76.2
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 3.9e-113 411.8 231 79.2
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 3.9e-113 411.8 249 74.3
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 5.1e-113 411.4 253 72.7
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 5.1e-113 411.4 252 73.0
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 5.1e-113 411.4 256 72.3
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 1.1e-112 410.2 245 73.9
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 1.1e-112 410.2 253 70.8
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 1.9e-112 409.5 236 76.7
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 1.9e-112 409.5 249 74.7
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 3.3e-112 408.7 251 71.3
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 5.7e-112 407.9 253 71.9
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.7e-112 407.9 250 74.4
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 5.7e-112 407.9 251 74.5
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 7.4e-112 407.5 234 75.2
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 9.6e-112 407.1 224 79.9
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 9.6e-112 407.1 234 76.1
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 1.3e-111 406.8 242 74.4
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 1.3e-111 406.8 242 73.1
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 1.6e-111 406.4 241 74.7
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 1.6e-111 406.4 240 74.6
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 1.6e-111 406.4 234 76.1
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.6e-111 406.4 249 73.9
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 1.6e-111 406.4 252 73.4
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 1.6e-111 406.4 230 78.3
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 1.6e-111 406.4 233 74.2
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.1e-111 406.0 244 73.4
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.1e-111 406.0 249 71.9
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 2.8e-111 405.6 241 74.7
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.8e-111 405.6 250 74.0
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 4.8e-111 404.8 234 76.5
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 6.3e-111 404.4 242 74.0
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 6.3e-111 404.4 242 74.0
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 6.3e-111 404.4 246 72.8
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 8.2e-111 404.1 249 72.3
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 8.2e-111 404.1 244 75.4
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 8.2e-111 404.1 249 73.9
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 8.2e-111 404.1 250 72.8
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.1e-110 403.7 248 73.0
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.4e-110 403.3 247 72.1
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 1.4e-110 403.3 244 72.1
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 1.8e-110 402.9 236 74.2
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 1.8e-110 402.9 245 72.2
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 1.8e-110 402.9 251 74.1
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 2.4e-110 402.5 240 75.0
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 2.4e-110 402.5 233 73.8
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 3.1e-110 402.1 252 72.6
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 4.1e-110 401.7 240 73.3
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 4.1e-110 401.7 240 73.3
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 4.1e-110 401.7 253 72.3
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 4.1e-110 401.7 253 72.3
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 5.3e-110 401.4 241 73.4
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 5.3e-110 401.4 240 74.2
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.3e-110 401.4 253 72.3
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 5.3e-110 401.4 250 70.0
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 9.0e-110 400.6 255 72.9
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 9.0e-110 400.6 232 73.7
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 1.2e-109 400.2 247 70.4
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 1.2e-109 400.2 235 73.2
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 1.5e-109 399.8 244 70.5
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 2.0e-109 399.4 250 72.8
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 2.6e-109 399.1 231 74.9
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 5.9e-109 397.9 240 72.9
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 5.9e-109 397.9 240 72.9
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 5.9e-109 397.9 254 71.7
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 7.6e-109 397.5 239 72.0
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.3e-108 396.7 240 71.2
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 1.7e-108 396.4 231 74.5
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 1.7e-108 396.4 247 71.7
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 2.2e-108 396.0 241 72.2
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 2.2e-108 396.0 246 72.4
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 2.9e-108 395.6 247 71.3
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 2.9e-108 395.6 242 72.7
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 3.8e-108 395.2 232 74.1
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 5.0e-108 394.8 232 74.1
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 6.5e-108 394.4 254 70.9
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 8.4e-108 394.0 248 70.6
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 1.4e-107 393.3 237 71.7
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 1.9e-107 392.9 250 70.0
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 1.9e-107 392.9 253 70.4
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 1.9e-107 392.9 251 71.3
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 3.2e-107 392.1 240 70.8
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 3.5e-106 388.7 224 75.0
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 4.6e-106 388.3 244 70.1
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 7.9e-106 387.5 228 71.9
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 6.7e-105 384.4 234 71.8
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 8.7e-105 384.0 239 70.3
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 8.7e-105 384.0 241 69.3
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 8.7e-105 384.0 241 69.3
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 2.5e-104 382.5 236 70.8
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 3.3e-104 382.1 234 71.4
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 3.7e-103 378.6 234 70.5
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 1.4e-102 376.7 232 69.0
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 5.9e-101 371.3 223 74.4
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 5.9e-101 371.3 233 67.8
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 4.2e-99 365.2 242 68.2
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 4.2e-99 365.2 252 65.9
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 2.3e-97 359.4 210 78.6
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 5.1e-97 358.2 222 70.3
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 2.0e-96 356.3 229 67.2
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 6.9e-94 347.8 229 65.5
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 1.2e-93 347.1 232 66.4
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 1.5e-93 346.7 236 65.3
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 1.3e-92 343.6 224 65.2
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 7.2e-83 311.2 249 59.4
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 5.7e-80 301.6 182 76.9
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.2e-74 283.9 249 57.0
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 3.7e-71 272.3 152 76.3
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.8e-70 270.0 157 73.2
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 9.8e-64 247.7 177 62.1
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 1.7e-55 220.3 222 46.8
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 7.8e-53 211.5 237 46.0
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 2.3e-44 183.3 204 48.5
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 1.2e-37 161.0 96 71.9
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 1.5e-27 127.5 90 64.4
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.9e-23 113.2 116 49.1
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.4e-22 110.9 141 43.3
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 2.8e-10 70.1 51 56.9
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 1.4e-09 67.8 63 52.4


User provided reference genes

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