Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 3.0e-160 568.5 300 100.0
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 4.7e-158 561.2 300 98.7
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.2e-100 370.5 298 66.4
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 1.7e-99 366.7 299 63.9
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 2.5e-98 362.8 297 63.3
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 4.2e-98 362.1 311 63.0
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.2e-98 362.1 297 63.6
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.5e-98 361.7 297 64.3
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.2e-97 360.5 302 62.9
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 1.8e-96 356.7 299 61.9
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 2.3e-96 356.3 296 62.5
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.0e-96 355.9 306 62.1
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 3.9e-96 355.5 306 62.1
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 5.1e-96 355.1 307 63.5
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.5e-95 353.6 254 69.7
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 1.5e-95 353.6 306 61.8
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.5e-95 353.6 306 61.8
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.3e-95 352.4 303 62.0
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 4.3e-95 352.1 339 56.9
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.7e-95 351.7 301 63.8
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 5.7e-95 351.7 303 62.0
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 9.7e-95 350.9 310 61.6
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.1e-93 345.9 308 59.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 5.3e-93 345.1 300 59.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 1.2e-92 344.0 298 60.4
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 2.6e-92 342.8 300 62.7
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 2.6e-92 342.8 298 61.4
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 3.4e-92 342.4 298 59.4
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 4.5e-92 342.0 299 59.5
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.3e-91 340.5 316 60.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.3e-91 340.5 303 60.7
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 6.5e-91 338.2 300 59.3
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 6.5e-91 338.2 300 59.3
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 8.5e-91 337.8 308 58.4
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.1e-90 337.4 297 59.3
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 1.4e-90 337.0 298 61.7
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.9e-90 336.7 297 63.3
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 4.2e-90 335.5 297 60.6
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 5.5e-90 335.1 298 60.7
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 7.2e-90 334.7 298 58.1
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 1.2e-89 334.0 299 60.5
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.1e-89 333.2 297 58.9
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 7.9e-89 331.3 298 59.7
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 7.9e-89 331.3 309 57.6
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.0e-88 330.9 298 59.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 1.0e-88 330.9 298 58.4
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 1.8e-88 330.1 298 59.4
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.3e-88 329.7 294 59.2
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 3.0e-88 329.3 298 59.7
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.1e-87 327.4 317 57.1
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.1e-87 327.4 313 57.8
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.1e-87 327.4 294 59.9
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 2.6e-87 326.2 301 58.5
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 3.3e-87 325.9 271 62.0
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 4.4e-87 325.5 317 55.2
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 4.4e-87 325.5 304 56.6
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 5.7e-87 325.1 317 55.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 5.7e-87 325.1 273 63.7
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 1.7e-86 323.6 309 58.3
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 2.2e-86 323.2 317 57.1
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 2.2e-86 323.2 317 54.9
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 2.2e-86 323.2 317 54.9
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 2.8e-86 322.8 295 58.0
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 3.7e-86 322.4 280 60.4
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 3.7e-86 322.4 317 54.9
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 3.7e-86 322.4 317 54.9
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 8.2e-86 321.2 300 58.7
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 1.8e-85 320.1 278 60.1
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 9.1e-85 317.8 300 58.7
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 9.1e-85 317.8 301 56.1
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.1e-85 317.8 298 60.4
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.0e-83 314.3 318 55.3
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 1.0e-83 314.3 308 54.9
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.3e-83 313.9 304 55.9
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 2.2e-83 313.2 313 53.7
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 2.5e-82 309.7 316 55.1
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 5.5e-82 308.5 286 57.0
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 6.1e-81 305.1 298 58.4
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 8.0e-81 304.7 299 54.8
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.3e-80 303.1 267 58.4
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.0e-80 302.8 260 59.6
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 4.0e-80 302.4 309 53.7
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 6.7e-80 301.6 297 55.9
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 1.1e-79 300.8 299 55.9
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.3e-78 297.4 299 57.5
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.7e-78 295.8 310 53.5
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 2.7e-76 289.7 302 55.0
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 2.7e-76 289.7 310 52.6
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 4.2e-74 282.3 260 57.3
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 2.3e-72 276.6 306 52.3
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 2.0e-71 273.5 268 54.5
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 1.7e-70 270.4 297 53.5
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 3.7e-70 269.2 307 53.4
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.0e-68 263.5 297 53.9
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 3.5e-68 262.7 296 51.0
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.2e-66 256.1 206 65.0
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 1.8e-64 250.4 310 47.4
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 4.0e-64 249.2 307 47.6
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 7.5e-63 245.0 275 52.0
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 1.6e-60 237.3 203 61.6
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 1.0e-56 224.6 245 52.2
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 7.8e-52 208.4 306 43.8
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 3.0e-51 206.5 228 49.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.2e-49 201.1 273 45.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.8e-49 199.9 302 43.7
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 2.6e-47 193.4 270 41.1
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 3.7e-46 189.5 304 40.1
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 1.9e-45 187.2 297 40.4
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 5.6e-42 175.6 314 37.3
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 2.1e-41 173.7 143 60.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 3.1e-40 169.9 299 40.8
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 4.0e-40 169.5 188 50.0
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.5e-39 167.5 135 63.7
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.4e-39 166.0 300 37.0
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 6.2e-33 145.6 132 62.1
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 1.8e-32 144.1 127 57.5
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.9e-30 136.7 120 60.8
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 3.5e-28 129.8 140 55.7
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 7.8e-28 128.6 120 55.0
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 1.6e-25 120.9 179 42.5
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.1e-24 118.2 122 57.4
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 4.0e-24 116.3 99 55.6
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.4e-23 113.2 227 35.2
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.7e-22 110.9 152 41.4
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.2e-22 110.5 178 37.6
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 4.2e-21 106.3 159 42.1
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 2.7e-20 103.6 90 62.2
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.5e-18 97.1 130 47.7
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 8.1e-17 92.0 98 52.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 5.3e-16 89.4 103 46.6
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.2e-13 80.1 94 52.1
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.5e-10 70.5 90 41.1
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 1.7e-06 57.8 64 53.1


User provided reference genes

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