Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.0e-287 992.6 489 100.0
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 2.0e-283 978.4 489 98.6
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.3e-231 805.4 488 79.5
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 8.9e-231 803.5 489 80.0
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 1.2e-230 803.1 491 81.3
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.5e-230 802.7 489 80.6
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.0e-230 802.4 489 79.8
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 2.6e-230 802.0 489 80.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.6e-230 802.0 489 79.8
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 3.4e-230 801.6 489 79.8
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 3.4e-230 801.6 489 79.6
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 5.8e-230 800.8 489 80.0
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.8e-230 800.8 489 79.8
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 9.8e-230 800.0 488 79.1
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.3e-229 799.7 490 80.6
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 2.2e-229 798.9 489 79.6
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 3.7e-229 798.1 489 80.2
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 3.7e-229 798.1 489 79.6
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 4.9e-229 797.7 488 79.7
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 4.9e-229 797.7 489 78.9
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 8.3e-229 797.0 493 80.5
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 8.3e-229 797.0 489 80.4
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.1e-228 796.6 489 79.6
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.4e-228 796.2 488 79.5
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.4e-228 796.2 490 80.2
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 1.9e-228 795.8 490 80.4
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.9e-228 795.8 489 79.8
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 4.1e-228 794.7 489 80.0
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 5.4e-228 794.3 489 80.0
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.2e-227 793.1 489 79.1
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 1.6e-227 792.7 490 79.6
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 2.1e-227 792.3 489 79.8
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 2.1e-227 792.3 488 79.5
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 2.7e-227 792.0 488 78.5
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 6.0e-227 790.8 490 80.0
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.3e-226 789.6 488 78.3
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 1.3e-226 789.6 489 80.2
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 5.1e-226 787.7 490 79.6
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 6.6e-226 787.3 489 79.1
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 8.6e-226 786.9 490 79.6
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 9.5e-225 783.5 490 78.8
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 1.2e-224 783.1 490 79.2
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.6e-224 782.7 489 77.9
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 1.1e-223 780.0 494 78.1
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 4.0e-223 778.1 489 78.5
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 8.9e-223 776.9 489 78.7
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 2.6e-222 775.4 479 79.5
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 3.4e-222 775.0 521 74.7
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 4.4e-222 774.6 489 78.7
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 4.4e-222 774.6 490 78.2
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.6e-222 773.9 489 78.1
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 4.9e-221 771.2 490 77.3
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.9e-221 771.2 489 78.1
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 8.3e-221 770.4 489 78.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 7.1e-220 767.3 489 77.9
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.6e-219 766.1 493 77.1
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 1.6e-219 766.1 490 77.1
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.6e-219 764.6 493 77.9
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 4.6e-219 764.6 493 77.9
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.0e-218 763.5 489 77.9
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-218 762.7 493 77.5
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 3.9e-218 761.5 490 76.1
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 6.6e-218 760.8 490 78.4
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 6.6e-218 760.8 491 77.4
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.1e-217 760.0 489 76.1
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 1.5e-217 759.6 489 76.1
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.5e-217 758.8 421 86.0
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 7.3e-217 757.3 490 78.2
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.6e-216 756.1 492 77.4
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 3.6e-216 755.0 487 76.0
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 3.6e-216 755.0 489 76.3
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 3.6e-216 755.0 490 76.3
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 4.7e-216 754.6 490 77.6
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 6.2e-216 754.2 486 76.7
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 1.4e-215 753.1 490 77.3
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.8e-215 752.7 489 77.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.1e-215 751.9 489 76.7
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 2.0e-214 749.2 489 75.9
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 2.6e-214 748.8 491 77.4
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 9.9e-214 746.9 491 77.6
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 9.9e-214 746.9 491 77.6
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.3e-213 746.5 489 75.3
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.3e-213 746.5 488 77.0
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 3.8e-213 745.0 489 75.3
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 6.4e-213 744.2 489 75.5
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 3.2e-212 741.9 393 89.8
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 4.2e-212 741.5 396 89.1
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 5.4e-212 741.1 396 89.1
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 5.4e-212 741.1 489 75.5
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 9.3e-212 740.3 393 89.6
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 9.3e-212 740.3 393 89.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 1.2e-211 740.0 393 89.1
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.2e-211 740.0 486 73.9
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.6e-211 739.6 393 89.3
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.6e-211 739.6 489 74.8
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 9.6e-209 730.3 490 74.3
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 2.1e-208 729.2 393 87.8
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 3.3e-201 705.3 427 78.2
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.6e-200 701.8 464 74.6
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 9.0e-199 697.2 496 72.0
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 8.7e-194 680.6 476 70.2
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.5e-193 679.1 393 83.5
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 4.3e-193 678.3 389 80.7
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 1.3e-192 676.8 431 73.8
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 2.1e-192 676.0 450 74.4
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 1.0e-189 667.2 400 77.8
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 2.1e-179 632.9 389 79.7
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 5.1e-178 628.2 392 75.0
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.3e-169 598.6 436 70.0
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 9.7e-169 597.4 389 69.2
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 5.9e-166 588.2 392 68.6
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 1.7e-165 586.6 489 63.8
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 8.5e-157 557.8 289 91.7
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 1.8e-154 550.1 289 90.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.1e-135 486.1 347 71.8
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 4.5e-134 482.3 295 77.6
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.0e-101 374.8 237 77.2
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.0e-101 373.2 274 69.3
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 2.4e-82 310.5 172 83.7
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 1.2e-62 245.0 130 87.7
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.6e-62 244.6 196 63.3
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.3e-60 236.5 135 84.4
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.3e-59 235.0 139 80.6
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 1.1e-47 195.3 140 72.1
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.2e-38 165.2 163 53.4
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 8.8e-37 159.1 94 83.0
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 3.6e-30 137.1 105 64.8
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 4.7e-14 83.6 59 67.8
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 2.3e-08 64.7 127 31.5
Oeu029778.1 Olea europaea HOM05D000776 ORTHO05D001624 4.3e-07 60.5 160 26.9
TPR.G5954 Trifolium pratense HOM05D000776 ORTHO05D001624 4.3e-07 60.5 157 26.8
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 5.6e-07 60.1 128 32.8
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 7.3e-07 59.7 156 28.8
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.1e-06 58.2 167 26.3
CSS0022914 Camellia sinensis var. sinensis HOM05D000776 ORTHO05D001624 2.8e-06 57.8 174 28.7
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 2.8e-06 57.8 125 29.6
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 6.2e-06 56.6 151 31.1


User provided reference genes

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