Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 1.2e-183 646.4 326 100.0
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 5.3e-171 604.4 327 94.5
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 4.8e-23 112.8 326 32.2
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 2.5e-19 100.5 218 37.6
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 9.4e-19 98.6 179 36.3
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.7e-18 96.3 213 34.7
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 6.7e-17 92.4 329 30.4
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 1.3e-15 88.2 282 30.5
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.2e-13 81.6 194 37.1
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 1.7e-12 77.8 208 34.6
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 2.2e-12 77.4 257 31.1
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 3.8e-12 76.6 210 35.2
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 5.0e-12 76.3 250 30.8
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 6.5e-12 75.9 212 32.5
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 8.5e-12 75.5 213 33.8
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 1.1e-11 75.1 252 33.3
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 1.5e-11 74.7 186 38.2
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.9e-11 74.3 309 29.1
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.9e-11 74.3 257 31.1
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 1.9e-11 74.3 261 31.0
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 3.2e-11 73.6 174 33.9
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 4.2e-11 73.2 217 34.1
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 4.2e-11 73.2 283 32.2
TAR623G0806 Trochodendron aralioides HOM05D007266 ORTHO05D005982 4.2e-11 73.2 142 37.3
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 7.2e-11 72.4 251 31.1
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 7.2e-11 72.4 257 30.7
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 1.2e-10 71.6 217 33.2
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 6.1e-10 69.3 119 42.0
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.8e-09 67.8 143 40.6
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 1.8e-09 67.8 312 24.7
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.3e-09 67.4 259 29.7
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 3.0e-09 67.0 236 31.8
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 5.2e-09 66.2 101 41.6
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 5.2e-09 66.2 243 30.0
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 8.8e-09 65.5 311 24.4
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.5e-08 64.7 224 29.0
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 1.5e-08 64.7 364 26.9
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 3.4e-08 63.5 303 27.7
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 3.4e-08 63.5 205 30.2
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 4.4e-08 63.2 210 31.4
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 4.4e-08 63.2 113 44.2
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 5.7e-08 62.8 258 27.9
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 9.8e-08 62.0 93 44.1
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 9.8e-08 62.0 93 44.1
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 9.8e-08 62.0 93 44.1
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 9.8e-08 62.0 167 35.9
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 1.3e-07 61.6 106 41.5
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 1.7e-07 61.2 218 29.8
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 2.2e-07 60.8 131 37.4
Lj3g0005568 Lotus japonicus HOM05D007266 ORTHO05D005982 2.2e-07 60.8 127 37.0
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 2.8e-07 60.5 221 26.7
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 4.8e-07 59.7 147 34.7
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 6.3e-07 59.3 151 33.8
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 8.3e-07 58.9 133 37.6
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 8.3e-07 58.9 286 28.7
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 1.1e-06 58.5 224 27.2
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 1.4e-06 58.2 113 38.1
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.8e-06 57.8 100 42.0
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 1.8e-06 57.8 104 36.5
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 2.4e-06 57.4 291 26.1
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 3.1e-06 57.0 288 27.1
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 4.1e-06 56.6 111 37.8
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 4.1e-06 56.6 149 32.9
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 5.4e-06 56.2 156 33.3
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 7.0e-06 55.8 251 30.3


User provided reference genes

Program Settings