Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 2.9e-151 538.5 266 100.0
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 2.7e-149 531.9 266 98.5
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 3.3e-102 375.6 251 71.3
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 4.4e-99 365.2 257 68.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 9.2e-97 357.5 250 68.8
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.6e-96 356.7 259 68.7
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 4.6e-96 355.1 255 69.0
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.0e-95 354.0 240 69.6
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 1.7e-95 353.2 259 66.4
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 3.9e-95 352.1 259 65.3
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 3.9e-95 352.1 240 67.1
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 5.0e-95 351.7 241 70.1
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.1e-94 350.5 242 69.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 1.1e-94 350.5 255 64.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 4.3e-94 348.6 241 70.1
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 5.6e-94 348.2 240 67.5
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.2e-93 347.1 241 68.0
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.6e-93 346.7 238 68.5
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 2.1e-93 346.3 238 68.5
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 2.8e-93 345.9 259 64.9
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 4.7e-93 345.1 259 65.6
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.0e-93 344.4 250 65.6
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 8.0e-93 344.4 238 67.6
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.4e-92 343.6 241 68.9
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.3e-92 342.8 241 68.9
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 3.1e-92 342.4 257 63.8
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.1e-92 342.4 239 66.5
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 5.2e-92 341.7 255 63.5
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 8.9e-92 340.9 259 61.8
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.2e-91 340.5 241 67.2
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 1.5e-91 340.1 239 66.1
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 2.0e-91 339.7 238 67.6
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 2.0e-91 339.7 239 66.9
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 2.6e-91 339.3 256 64.1
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 3.4e-91 339.0 259 64.1
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 5.8e-91 338.2 235 67.2
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 5.8e-91 338.2 239 66.9
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 7.5e-91 337.8 236 66.9
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 7.5e-91 337.8 249 65.9
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 9.8e-91 337.4 242 66.5
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.7e-90 336.7 255 62.0
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 2.2e-90 336.3 236 66.9
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 2.9e-90 335.9 244 64.8
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.9e-90 335.9 257 62.6
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 3.7e-90 335.5 235 67.7
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 4.9e-90 335.1 257 62.6
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 6.4e-90 334.7 240 65.0
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.1e-89 334.0 255 61.6
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 1.4e-89 333.6 255 62.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.4e-89 333.6 255 61.6
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 1.4e-89 333.6 234 64.1
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.9e-89 333.2 255 61.6
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 3.2e-89 332.4 240 65.0
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 4.1e-89 332.0 244 66.4
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 4.1e-89 332.0 240 65.8
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 4.1e-89 332.0 235 66.4
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 4.1e-89 332.0 236 65.3
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.0e-89 331.3 255 61.6
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 9.2e-89 330.9 234 67.1
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 9.2e-89 330.9 236 64.4
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.2e-88 330.5 238 64.7
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.2e-88 330.5 301 55.5
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.6e-88 330.1 255 64.7
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.0e-88 329.7 255 61.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 2.0e-88 329.7 235 66.4
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 3.5e-88 328.9 244 63.9
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 4.6e-88 328.6 234 65.0
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 6.0e-88 328.2 233 66.1
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.7e-87 326.6 242 63.2
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 2.3e-87 326.2 236 64.4
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 2.3e-87 326.2 241 65.6
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.3e-87 326.2 234 64.5
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 6.6e-87 324.7 258 61.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 6.6e-87 324.7 241 63.5
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 1.5e-86 323.6 258 60.9
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 1.9e-86 323.2 257 61.1
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 4.3e-86 322.0 258 60.9
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 7.3e-86 321.2 288 56.2
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 1.1e-84 317.4 238 63.4
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 3.7e-82 308.9 234 62.4
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 4.6e-80 302.0 243 63.0
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 6.8e-76 288.1 232 57.3
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 3.4e-75 285.8 258 56.2
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.9e-74 282.7 232 56.0
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 8.4e-74 281.2 259 56.4
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.4e-73 279.6 237 54.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 5.4e-73 278.5 236 55.5
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 3.0e-71 272.7 187 66.3
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 1.1e-70 270.8 234 58.5
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 1.5e-70 270.4 185 67.0
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 6.4e-66 255.0 180 66.7
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 7.1e-65 251.5 179 65.9
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 2.1e-64 250.0 180 65.6
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.3e-63 247.3 180 64.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 3.9e-63 245.7 180 63.3
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.5e-62 243.8 229 49.8
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 2.8e-61 239.6 180 63.9
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 3.6e-61 239.2 243 47.7
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.8e-60 236.9 181 62.4
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.4e-57 227.3 206 54.9
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 3.2e-57 226.1 244 44.7
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.3e-55 219.9 215 46.5
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 8.7e-55 218.0 232 44.4
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 6.9e-52 208.4 199 49.2
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 9.0e-52 208.0 175 58.3
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 2.6e-51 206.5 147 63.3
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 8.4e-50 201.4 179 50.3
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 6.5e-42 175.3 109 67.0
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 1.9e-41 173.7 181 46.4
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 6.5e-34 148.7 207 37.7
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 3.9e-31 139.4 242 38.8
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 4.2e-25 119.4 106 54.7
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 8.8e-23 111.7 298 26.5


User provided reference genes

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