Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1037 Papaver somniferum HOM05D003987 ORTHO05D004532 1.1e-274 949.5 516 100.0
PSO339G5295 Papaver somniferum HOM05D003987 ORTHO05D004532 6.2e-267 923.7 516 97.3
Nn2g13566 Nelumbo nucifera HOM05D003987 ORTHO05D004532 1.4e-112 411.0 527 51.6
TAR633G1447 Trochodendron aralioides HOM05D003987 ORTHO05D004532 3.1e-93 346.7 528 48.5
Dinv37095 Davidia involucrata HOM05D003987 ORTHO05D004532 2.3e-88 330.5 530 46.0
GSVIVG01034033001 Vitis vinifera HOM05D003987 ORTHO05D004532 1.1e-85 321.6 511 45.2
CSS0027188 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 1.8e-85 320.9 521 45.1
Lj2A83T77 Lonicera japonica HOM05D003987 ORTHO05D004532 1.2e-84 318.2 531 42.7
Aqoxy1G00765 Aquilegia oxysepala HOM05D003987 ORTHO05D004532 8.6e-83 312.0 527 42.7
Potri.006G094600 Populus trichocarpa HOM05D003987 ORTHO05D004532 1.1e-82 311.6 536 43.5
Sabra06G0072400 Salix brachista HOM05D003987 ORTHO05D004532 1.9e-82 310.8 536 42.7
Gohir.D04G127200 Gossypium hirsutum HOM05D003987 ORTHO05D004532 2.5e-82 310.5 523 42.8
Atru.chr8.2120 Acer truncatum HOM05D003987 ORTHO05D004532 4.3e-82 309.7 530 45.1
Duzib093G0208 Durio zibethinus HOM05D003987 ORTHO05D004532 5.6e-82 309.3 512 43.9
MBI14_g28607_MAGBIO Magnolia biondii HOM05D003987 ORTHO05D004532 2.1e-81 307.4 512 44.3
Gorai.012G110200 Gossypium raimondii HOM05D003987 ORTHO05D004532 2.3e-80 303.9 523 42.3
Thecc.05G024900 Theobroma cacao HOM05D003987 ORTHO05D004532 3.1e-80 303.5 524 43.3
Duzib128G2001 Durio zibethinus HOM05D003987 ORTHO05D004532 1.2e-79 301.6 526 43.0
Potri.016G109100 Populus trichocarpa HOM05D003987 ORTHO05D004532 2.0e-79 300.8 532 43.0
Ciclev10011513m.g Citrus clementina HOM05D003987 ORTHO05D004532 7.5e-79 298.9 523 44.2
ClCG10G021770 Citrullus lanatus HOM05D003987 ORTHO05D004532 2.2e-78 297.4 521 41.7
Prupe.6G268000 Prunus persica HOM05D003987 ORTHO05D004532 3.2e-77 293.5 524 43.7
COL.COLO4_14650 Corchorus olitorius HOM05D003987 ORTHO05D004532 7.8e-76 288.9 521 42.2
Gohir.A04G086900 Gossypium hirsutum HOM05D003987 ORTHO05D004532 1.3e-75 288.1 523 41.3
CsaV3_3G034330 Cucumis sativus L. HOM05D003987 ORTHO05D004532 1.7e-75 287.7 513 40.9
Cpa.g.sc56.87 Carica papaya HOM05D003987 ORTHO05D004532 3.9e-75 286.6 520 41.0
MELO3C009204.2 Cucumis melo HOM05D003987 ORTHO05D004532 2.5e-74 283.9 517 41.4
CSS0016809 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 3.3e-74 283.5 433 46.4
Manes.09G100200 Manihot esculenta HOM05D003987 ORTHO05D004532 4.3e-74 283.1 440 47.3
Gorai.002G259700 Gossypium raimondii HOM05D003987 ORTHO05D004532 9.5e-74 282.0 526 41.3
Haze_20924 Corylus avellana HOM05D003987 ORTHO05D004532 1.4e-72 278.1 518 43.4
CSS0029662 Camellia sinensis var. sinensis HOM05D003987 ORTHO05D004532 5.2e-72 276.2 509 40.1
Gohir.A01G224300 Gossypium hirsutum HOM05D003987 ORTHO05D004532 6.8e-72 275.8 539 40.4
TWI77G0200 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 1.5e-71 274.6 525 41.1
Peaxi162Scf01302g00045 Petunia axillaris HOM05D003987 ORTHO05D004532 2.0e-71 274.2 515 41.4
EL10Ac8g18936 Beta vulgaris HOM05D003987 ORTHO05D004532 4.4e-71 273.1 531 41.1
Hund08928 Selenicereus undatus HOM05D003987 ORTHO05D004532 1.3e-70 271.6 520 42.7
Dinv35526 Davidia involucrata HOM05D003987 ORTHO05D004532 3.7e-70 270.0 529 42.9
QL07p027561 Quercus lobata HOM05D003987 ORTHO05D004532 3.7e-70 270.0 487 43.3
Cfa017278 Carpinus fangiana HOM05D003987 ORTHO05D004532 2.1e-68 264.2 517 42.7
Actinidia05340 Actinidia chinensis HOM05D003987 ORTHO05D004532 2.7e-68 263.8 529 39.5
Hma1.2p1_0244F.1_g101070 Hydrangea macrophylla HOM05D003987 ORTHO05D004532 1.6e-65 254.6 534 40.3
vmacro08611 Vaccinium macrocarpon HOM05D003987 ORTHO05D004532 2.1e-65 254.2 497 41.6
AUR62025345 Chenopodium quinoa HOM05D003987 ORTHO05D004532 6.2e-65 252.7 528 38.4
Lj1g0003107 Lotus japonicus HOM05D003987 ORTHO05D004532 6.2e-65 252.7 515 38.1
Peaxi162Scf00014g00921 Petunia axillaris HOM05D003987 ORTHO05D004532 6.2e-65 252.7 517 40.0
Phvul.008G111900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 1.4e-64 251.5 523 38.6
SalBow3G0011 Salvia bowleyana HOM05D003987 ORTHO05D004532 6.8e-64 249.2 529 37.1
AUR62028348 Chenopodium quinoa HOM05D003987 ORTHO05D004532 8.9e-64 248.8 511 38.9
Lsat_1_v5_gn_9_33201 Lactuca sativa HOM05D003987 ORTHO05D004532 8.9e-64 248.8 509 37.3
PGSC0003DMG400019132 Solanum tuberosum HOM05D003987 ORTHO05D004532 2.6e-63 247.3 522 36.8
MD12G1157700 Malus domestica HOM05D003987 ORTHO05D004532 3.7e-62 243.4 519 41.2
Glyma.07G142800 Glycine max HOM05D003987 ORTHO05D004532 6.4e-62 242.7 514 36.4
Glyma.18G193700 Glycine max HOM05D003987 ORTHO05D004532 1.4e-61 241.5 524 36.3
Oeu018344.1 Olea europaea HOM05D003987 ORTHO05D004532 1.9e-61 241.1 537 39.1
Medtr4g019040 Medicago truncatula HOM05D003987 ORTHO05D004532 3.2e-61 240.4 518 39.6
Sc22g0004580 Simmondsia chinensis HOM05D003987 ORTHO05D004532 3.2e-61 240.4 440 41.8
FvH4_6g12360 Fragaria vesca HOM05D003987 ORTHO05D004532 5.4e-61 239.6 544 39.5
Sed0025444 Sechium edule HOM05D003987 ORTHO05D004532 5.4e-61 239.6 441 42.4
Cc06_g01840 Coffea canephora HOM05D003987 ORTHO05D004532 7.1e-61 239.2 524 36.5
Nitab4.5_0017865g0010 Nicotiana tabacum HOM05D003987 ORTHO05D004532 9.2e-61 238.8 522 36.4
FAN02G3471 Fragaria x ananassa HOM05D003987 ORTHO05D004532 2.1e-60 237.7 551 38.1
Oeu009906.1 Olea europaea HOM05D003987 ORTHO05D004532 2.7e-60 237.3 527 38.7
MD04G1143500 Malus domestica HOM05D003987 ORTHO05D004532 3.5e-60 236.9 517 41.0
Nitab4.5_0000119g0280 Nicotiana tabacum HOM05D003987 ORTHO05D004532 6.0e-60 236.1 519 36.0
VMungo1383G2510 Vigna mungo HOM05D003987 ORTHO05D004532 6.0e-60 236.1 509 38.1
Migut.J00243 Erythranthe guttata HOM05D003987 ORTHO05D004532 1.3e-59 235.0 518 37.1
DCAR_028789 Daucus carota HOM05D003987 ORTHO05D004532 3.9e-59 233.4 524 36.5
RcHm_v2.0_Chr3g0464181 Rosa chinensis HOM05D003987 ORTHO05D004532 8.6e-59 232.3 555 38.6
Lj3g0003026 Lotus japonicus HOM05D003987 ORTHO05D004532 1.5e-58 231.5 509 37.1
TAR623G1001 Trochodendron aralioides HOM05D003987 ORTHO05D004532 9.5e-58 228.8 469 40.7
PGR031G1271 Punica granatum HOM05D003987 ORTHO05D004532 2.1e-57 227.6 528 36.4
PGSC0003DMG400020336 Solanum tuberosum HOM05D003987 ORTHO05D004532 1.4e-56 224.9 520 37.7
Psat7g242560 Pisum sativum HOM05D003987 ORTHO05D004532 2.4e-56 224.2 520 38.3
Carub.0004s1992 Capsella rubella HOM05D003987 ORTHO05D004532 4.0e-56 223.4 524 36.3
DCAR_012161 Daucus carota HOM05D003987 ORTHO05D004532 8.9e-56 222.2 544 35.7
Sopen09g006640 Solanum pennellii HOM05D003987 ORTHO05D004532 1.5e-55 221.5 521 37.8
CANSAT78G1629 Cannabis sativa HOM05D003987 ORTHO05D004532 2.6e-55 220.7 522 35.4
arahy.Tifrunner.gnm1.ann1.S0ZXK0 Arachis hypogaea HOM05D003987 ORTHO05D004532 3.4e-55 220.3 526 37.6
arahy.Tifrunner.gnm1.ann1.B3S732 Arachis hypogaea HOM05D003987 ORTHO05D004532 4.4e-55 219.9 513 37.4
Lalb_Chr01g0022851 Lupinus albus HOM05D003987 ORTHO05D004532 7.6e-55 219.2 517 38.5
Oeu044376.1 Olea europaea HOM05D003987 ORTHO05D004532 1.7e-54 218.0 434 38.9
HanXRQChr01g0001271 Helianthus annuus HOM05D003987 ORTHO05D004532 1.4e-53 214.9 524 37.8
AL4G34930 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 9.2e-53 212.2 518 36.9
Sp4g20270 Schrenkiella parvula HOM05D003987 ORTHO05D004532 9.2e-53 212.2 531 36.0
FAN09G0914 Fragaria x ananassa HOM05D003987 ORTHO05D004532 2.7e-52 210.7 553 36.0
AL5G35070 Arabidopsis lyrata HOM05D003987 ORTHO05D004532 1.7e-51 208.0 509 35.8
AT2G37960 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 2.5e-50 204.1 517 35.6
Ca_20115_v3 Cicer arietinum L. HOM05D003987 ORTHO05D004532 5.6e-50 203.0 485 38.6
Sed0006107 Sechium edule HOM05D003987 ORTHO05D004532 7.3e-50 202.6 446 37.0
Lalb_Chr19g0124881 Lupinus albus HOM05D003987 ORTHO05D004532 1.6e-49 201.4 458 37.6
Duzib093G1974 Durio zibethinus HOM05D003987 ORTHO05D004532 2.8e-49 200.7 392 39.3
Thhalv10010371m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 4.8e-49 199.9 474 33.8
Nitab4.5_0000008g0400 Nicotiana tabacum HOM05D003987 ORTHO05D004532 4.8e-49 199.9 534 36.0
Thhalv10016588m.g Eutrema salsugineum HOM05D003987 ORTHO05D004532 1.8e-48 198.0 527 35.5
THA.LOC104805691 Tarenaya hassleriana HOM05D003987 ORTHO05D004532 6.9e-48 196.1 434 36.6
SGA_v2.0_scaffold75G24988 Striga asiatica HOM05D003987 ORTHO05D004532 1.2e-47 195.3 516 34.3
Sopen10g036150 Solanum pennellii HOM05D003987 ORTHO05D004532 2.0e-47 194.5 521 31.9
unitig_749.g14175 Utricularia gibba HOM05D003987 ORTHO05D004532 2.9e-46 190.7 535 33.5
CDE02G0690 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 3.8e-46 190.3 526 31.0
Aa31LG10G8760 Aethionema arabicum HOM05D003987 ORTHO05D004532 1.6e-44 184.9 467 34.7
AT3G54060 Arabidopsis thaliana HOM05D003987 ORTHO05D004532 2.1e-44 184.5 477 36.7
BolC4t28137H Brassica oleracea HOM05D003987 ORTHO05D004532 1.7e-43 181.4 551 32.5
Migut.L01985 Erythranthe guttata HOM05D003987 ORTHO05D004532 1.7e-43 181.4 456 34.2
BcaC02g11934 Brassica carinata HOM05D003987 ORTHO05D004532 8.7e-43 179.1 431 33.9
A04p29100 Brassica napus HOM05D003987 ORTHO05D004532 1.1e-42 178.7 527 35.1
CDE09G1167 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 1.5e-42 178.3 518 32.6
BraA04t18380Z Brassica rapa HOM05D003987 ORTHO05D004532 2.5e-42 177.6 529 35.7
BcaB02g09232 Brassica carinata HOM05D003987 ORTHO05D004532 4.3e-42 176.8 432 34.7
BraA05t19770Z Brassica rapa HOM05D003987 ORTHO05D004532 9.6e-42 175.6 441 33.8
C04p09710 Brassica napus HOM05D003987 ORTHO05D004532 2.1e-41 174.5 435 33.3
Gohir.D01G213600 Gossypium hirsutum HOM05D003987 ORTHO05D004532 2.8e-41 174.1 423 34.5
A05p08030 Brassica napus HOM05D003987 ORTHO05D004532 4.8e-41 173.3 441 34.0
Nitab4.5_0002152g0110 Nicotiana tabacum HOM05D003987 ORTHO05D004532 4.8e-41 173.3 517 35.4
arahy.Tifrunner.gnm1.ann1.84Z36X Arachis hypogaea HOM05D003987 ORTHO05D004532 1.5e-39 168.3 515 31.8
BolC4t22577H Brassica oleracea HOM05D003987 ORTHO05D004532 9.9e-39 165.6 442 34.2
BcaC08g44664 Brassica carinata HOM05D003987 ORTHO05D004532 7.1e-37 159.5 465 35.7
C06p21870 Brassica napus HOM05D003987 ORTHO05D004532 1.0e-35 155.6 466 33.9
CARHR132510 Cardamine hirsuta HOM05D003987 ORTHO05D004532 1.0e-35 155.6 532 32.3
CAN.G351.10 Capsicum annuum HOM05D003987 ORTHO05D004532 2.3e-35 154.5 257 40.1
arahy.Tifrunner.gnm1.ann1.C5KK4K Arachis hypogaea HOM05D003987 ORTHO05D004532 3.0e-35 154.1 446 33.0
A07p21960 Brassica napus HOM05D003987 ORTHO05D004532 2.5e-34 151.0 440 30.5
BraA07t29878Z Brassica rapa HOM05D003987 ORTHO05D004532 2.5e-34 151.0 449 31.2
Solyc09g011820.4 Solanum lycopersicum HOM05D003987 ORTHO05D004532 1.3e-33 148.7 458 34.9
arahy.Tifrunner.gnm1.ann1.L5BN96 Arachis hypogaea HOM05D003987 ORTHO05D004532 2.8e-33 147.5 500 31.2
BcaB02g07750 Brassica carinata HOM05D003987 ORTHO05D004532 1.8e-32 144.8 437 32.0
Carub.0005s2065 Capsella rubella HOM05D003987 ORTHO05D004532 1.2e-31 142.1 455 33.0
HPP92_003415 Vanilla planifolia HOM05D003987 ORTHO05D004532 3.4e-31 140.6 458 30.8
ECA248G1591 Erigeron canadensis HOM05D003987 ORTHO05D004532 1.3e-30 138.7 525 29.5
FAN05G0535 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.9e-29 134.8 277 38.3
Solyc10g086740.3 Solanum lycopersicum HOM05D003987 ORTHO05D004532 7.1e-29 132.9 348 32.2
TPR.G8182 Trifolium pratense HOM05D003987 ORTHO05D004532 2.7e-28 131.0 281 38.4
Sp5g18210 Schrenkiella parvula HOM05D003987 ORTHO05D004532 1.0e-27 129.0 442 29.2
MSTRG.19041 Avicennia marina HOM05D003987 ORTHO05D004532 1.8e-27 128.3 379 32.2
ATR0618G159 Amborella trichopoda HOM05D003987 ORTHO05D004532 3.9e-27 127.1 499 29.7
MSTRG.19040 Avicennia marina HOM05D003987 ORTHO05D004532 5.1e-27 126.7 145 49.0
Glyma.01G108800 Glycine max HOM05D003987 ORTHO05D004532 9.6e-26 122.5 409 31.1
Eucgr.A00531 Eucalyptus grandis HOM05D003987 ORTHO05D004532 4.8e-25 120.2 215 39.1
Glyma.01G108900 Glycine max HOM05D003987 ORTHO05D004532 8.2e-25 119.4 421 30.6
Glyma.U031101 Glycine max HOM05D003987 ORTHO05D004532 1.1e-24 119.0 421 30.6
Sp5g08320 Schrenkiella parvula HOM05D003987 ORTHO05D004532 2.4e-24 117.9 468 27.1
Actinidia01122 Actinidia chinensis HOM05D003987 ORTHO05D004532 4.0e-24 117.1 420 31.2
SEGI_16848 Sequoiadendron giganteum HOM05D003987 ORTHO05D004532 3.4e-23 114.0 481 29.7
Solyc10g086750.1 Solanum lycopersicum HOM05D003987 ORTHO05D004532 3.4e-23 114.0 132 50.0
Glyma.03G074167 Glycine max HOM05D003987 ORTHO05D004532 1.1e-21 109.0 399 29.1
TWI74G0508 Tripterygium wilfordii HOM05D003987 ORTHO05D004532 3.2e-21 107.5 450 30.4
TPR.G8224 Trifolium pratense HOM05D003987 ORTHO05D004532 1.2e-20 105.5 129 51.9
unitig_26.g9099 Utricularia gibba HOM05D003987 ORTHO05D004532 1.6e-20 105.1 311 31.8
Zm00001eb298020 Zea mays HOM05D003987 ORTHO05D004532 3.5e-20 104.0 540 28.9
Sabra16G0105800 Salix brachista HOM05D003987 ORTHO05D004532 2.3e-19 101.3 131 44.3
Dinv04008 Davidia involucrata HOM05D003987 ORTHO05D004532 9.7e-18 95.9 138 44.9
Psat6g189000 Pisum sativum HOM05D003987 ORTHO05D004532 2.2e-17 94.7 213 34.7
Medtr7g066170 Medicago truncatula HOM05D003987 ORTHO05D004532 8.2e-17 92.8 186 39.2
Glyma.01G153900 Glycine max HOM05D003987 ORTHO05D004532 1.8e-16 91.7 370 28.1
CDE04G2728 Ceratophyllum demersum HOM05D003987 ORTHO05D004532 1.2e-15 89.0 106 47.2
Rhsim07G0146000 Rhododendron simsii HOM05D003987 ORTHO05D004532 2.6e-15 87.8 252 32.9
FAN14G4402 Fragaria x ananassa HOM05D003987 ORTHO05D004532 1.7e-14 85.1 178 36.5
VMungo1309G3141 Vigna mungo HOM05D014262 ORTHO05D018084 3.6e-12 77.4 169 36.1
Phvul.006G111000 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 8.8e-11 72.8 117 35.9
TPR.G13647 Trifolium pratense HOM05D003987 ORTHO05D004532 4.8e-09 67.0 194 29.9
Phvul.008G082101 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.1e-08 65.9 144 30.6
SHI32880 Sapria himalayana HOM05D003987 ORTHO05D004532 2.4e-08 64.7 193 30.6
Phvul.008G081900 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 3.1e-08 64.3 130 32.3
VMungo1309G2694 Vigna mungo HOM05D014262 ORTHO05D018084 4.1e-08 63.9 168 31.5
Phvul.010G006900 Phaseolus vulgaris HOM05D003987 ORTHO05D004532 2.6e-07 61.2 439 26.0
SHI32881 Sapria himalayana HOM05D003987 ORTHO05D004532 2.6e-07 61.2 58 50.0
VMungo0331G1594 Vigna mungo HOM05D003987 ORTHO05D004532 5.9e-07 60.1 196 31.1
Phvul.005G150800 Phaseolus vulgaris HOM05D014262 ORTHO05D018084 1.0e-06 59.3 309 27.2
Os03g0100010 Oryza sativa ssp. japonica HOM05D003987 ORTHO05D004532 2.2e-06 58.2 67 46.3
BcaC02g11935 Brassica carinata HOM05D003987 ORTHO05D004532 2.9e-06 57.8 39 61.5
TPR.G34870 Trifolium pratense HOM05D003987 ORTHO05D004532 6.5e-06 56.6 206 29.1


User provided reference genes

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