Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 2.0e-128 462.6 269 100.0
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 5.2e-116 421.4 265 92.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 7.7e-43 178.3 257 42.4
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 1.5e-38 164.1 256 41.4
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 9.8e-38 161.4 248 41.9
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 6.8e-31 138.7 244 40.2
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 8.8e-31 138.3 266 38.3
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.2e-30 137.9 250 39.2
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 3.4e-30 136.3 253 36.8
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 4.9e-29 132.5 254 35.0
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 2.4e-28 130.2 256 37.1
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 4.1e-28 129.4 250 36.8
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 7.0e-28 128.6 226 39.4
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 7.0e-28 128.6 227 37.0
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 9.2e-28 128.3 260 37.3
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 9.2e-28 128.3 232 37.5
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 1.6e-27 127.5 257 37.4
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 4.5e-27 125.9 228 36.0
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 1.0e-26 124.8 246 37.0
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 1.0e-26 124.8 246 37.0
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.7e-26 124.0 236 34.7
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 2.3e-26 123.6 234 38.5
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 2.3e-26 123.6 234 38.5
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 8.6e-26 121.7 233 37.8
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 8.6e-26 121.7 233 39.1
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.1e-25 121.3 234 39.3
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.9e-25 120.6 236 34.7
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.9e-25 120.6 233 36.1
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 3.3e-25 119.8 273 35.5
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 4.3e-25 119.4 227 37.4
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 5.6e-25 119.0 266 35.7
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 9.5e-25 118.2 229 36.7
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 9.5e-25 118.2 248 35.1
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 3.6e-24 116.3 250 33.2
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 3.6e-24 116.3 249 35.3
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 1.8e-23 114.0 227 40.5
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 8.9e-23 111.7 254 33.5
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 2.0e-22 110.5 232 37.5
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 2.6e-22 110.2 229 34.9
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 5.7e-22 109.0 232 35.3
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.3e-21 107.8 261 35.2
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 1.7e-21 107.5 231 36.4
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 2.2e-21 107.1 243 34.6
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.2e-21 107.1 235 34.5
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.9e-21 106.7 235 33.6
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 2.9e-21 106.7 235 33.6
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 3.7e-21 106.3 227 36.1
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 4.9e-21 105.9 228 34.6
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 6.4e-21 105.5 229 34.5
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 1.1e-20 104.8 272 32.7
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 4.1e-20 102.8 243 35.8
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 4.1e-20 102.8 247 32.8
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 7.0e-20 102.1 222 33.8
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 7.0e-20 102.1 249 32.5
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 1.6e-19 100.9 247 33.2
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.6e-19 100.9 250 32.4
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 2.0e-19 100.5 243 33.7
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 2.7e-19 100.1 256 32.8
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 3.5e-19 99.8 243 32.1
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 4.6e-19 99.4 260 35.0
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 3.9e-18 96.3 223 32.3
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 8.6e-18 95.1 232 31.9
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 8.6e-18 95.1 226 36.3
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.5e-17 94.4 201 37.3
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 2.5e-17 93.6 226 35.8
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 1.6e-16 90.9 252 31.3
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 1.6e-16 90.9 250 30.0
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 1.8e-15 87.4 228 32.0
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 4.4e-14 82.8 108 48.1
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 4.4e-14 82.8 223 33.2
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 4.4e-14 82.8 257 28.4
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 1.3e-13 81.3 257 28.4
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 1.7e-13 80.9 231 28.1
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 3.7e-13 79.7 211 33.2
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 6.4e-13 79.0 244 29.5
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.4e-12 77.8 230 30.9
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 3.2e-12 76.6 221 32.1
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 5.4e-12 75.9 121 41.3
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 9.2e-12 75.1 245 29.8
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 6.0e-11 72.4 235 28.9
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 1.3e-10 71.2 235 28.5
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 1.7e-10 70.9 212 33.5
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 5.0e-10 69.3 265 27.5
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 6.6e-10 68.9 179 33.0
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 8.6e-10 68.6 187 32.6
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 1.1e-09 68.2 201 31.3
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 1.9e-09 67.4 272 26.5
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.5e-09 67.0 221 29.0
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.6e-08 64.3 244 27.9
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 8.1e-08 62.0 79 41.8
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.4e-07 61.2 202 30.2
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.4e-06 56.2 77 41.6
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 4.4e-06 56.2 103 35.0
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 5.8e-06 55.8 86 43.0


User provided reference genes

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