Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0928 Papaver somniferum HOM05D004023 ORTHO05D004681 3.6e-167 591.7 331 100.0
PSO384G3720 Papaver somniferum HOM05D004023 ORTHO05D004681 1.7e-161 572.8 331 98.2
PSO339G4574 Papaver somniferum HOM05D004023 ORTHO05D004681 1.5e-120 436.8 331 70.7
PSO339G2030 Papaver somniferum HOM05D004023 ORTHO05D004681 1.3e-87 327.4 283 65.7
PSO063G3828 Papaver somniferum HOM05D004023 ORTHO05D004681 6.1e-66 255.4 247 59.5
PSO339G0741 Papaver somniferum HOM05D004023 ORTHO05D004681 1.5e-43 181.0 297 54.9
Dinv42390 Davidia involucrata HOM05D004023 ORTHO05D004681 1.1e-33 148.3 245 38.0
TAR383G0448 Trochodendron aralioides HOM05D004023 ORTHO05D004681 4.0e-33 146.4 198 41.9
MD15G1217100 Malus domestica HOM05D004023 ORTHO05D004681 1.5e-32 144.4 198 41.4
AUR62028938 Chenopodium quinoa HOM05D004023 ORTHO05D004681 4.4e-32 142.9 200 42.0
Lj6g0013866 Lotus japonicus HOM05D004023 ORTHO05D004681 4.4e-32 142.9 201 39.8
Actinidia29930 Actinidia chinensis HOM05D004023 ORTHO05D004681 5.8e-32 142.5 198 41.4
Ca_23416_v3 Cicer arietinum L. HOM05D004023 ORTHO05D004681 5.8e-32 142.5 201 40.3
CSS0019806 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 7.5e-32 142.1 238 37.0
AUR62025247 Chenopodium quinoa HOM05D004023 ORTHO05D004681 7.5e-32 142.1 200 42.0
Glyma.09G069500 Glycine max HOM05D004023 ORTHO05D004681 1.3e-31 141.4 198 40.9
CSS0007502 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.7e-31 141.0 238 37.0
MD02G1091000 Malus domestica HOM05D004023 ORTHO05D004681 2.9e-31 140.2 198 40.4
CiPaw.03G206900 Carya illinoinensis HOM05D004023 ORTHO05D004681 3.7e-31 139.8 198 42.4
Haze_26009 Corylus avellana HOM05D004023 ORTHO05D004681 4.9e-31 139.4 198 42.4
Eucgr.C00816 Eucalyptus grandis HOM05D004023 ORTHO05D004681 4.9e-31 139.4 204 39.7
Cfa002993 Carpinus fangiana HOM05D004023 ORTHO05D004681 6.4e-31 139.0 198 41.9
CSS0006992 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.4e-30 137.9 238 36.6
Prupe.7G199400 Prunus persica HOM05D004023 ORTHO05D004681 2.4e-30 137.1 198 40.9
Thecc.09G077600 Theobroma cacao HOM05D004023 ORTHO05D004681 3.2e-30 136.7 198 40.4
FvH4_1g08620 Fragaria vesca HOM05D004023 ORTHO05D004681 5.4e-30 136.0 204 39.2
FAN19G1115 Fragaria x ananassa HOM05D004023 ORTHO05D004681 5.4e-30 136.0 204 39.2
Gohir.A06G076200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 9.2e-30 135.2 198 39.9
FAN26G1792 Fragaria x ananassa HOM05D004023 ORTHO05D004681 1.2e-29 134.8 204 38.7
Glyma.15G177500 Glycine max HOM05D004023 ORTHO05D004681 1.2e-29 134.8 195 42.1
QL11p000695 Quercus lobata HOM05D004023 ORTHO05D004681 1.2e-29 134.8 201 40.3
CDE05G3056 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 1.6e-29 134.4 198 39.9
Medtr2g041620 Medicago truncatula HOM05D004023 ORTHO05D004681 1.6e-29 134.4 204 39.7
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 1.6e-29 134.4 198 39.4
Atru.chr7.1700 Acer truncatum HOM05D004023 ORTHO05D004681 2.1e-29 134.0 199 39.2
FAN28G2268 Fragaria x ananassa HOM05D004023 ORTHO05D004681 2.1e-29 134.0 204 38.7
PSO478G2869 Papaver somniferum HOM05D004023 ORTHO05D004681 2.1e-29 134.0 135 54.8
Lalb_Chr08g0232581 Lupinus albus HOM05D004023 ORTHO05D004681 3.5e-29 133.3 204 38.7
Phvul.009G227400 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 4.6e-29 132.9 201 40.3
RcHm_v2.0_Chr2g0094881 Rosa chinensis HOM05D004023 ORTHO05D004681 4.6e-29 132.9 204 38.7
TPR.G28584 Trifolium pratense HOM05D004023 ORTHO05D004681 4.6e-29 132.9 201 39.8
CSS0012197 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 6.0e-29 132.5 204 37.7
FAN26G3281 Fragaria x ananassa HOM05D004023 ORTHO05D004681 6.0e-29 132.5 204 38.7
THA.LOC104826588 Tarenaya hassleriana HOM05D004023 ORTHO05D004681 6.0e-29 132.5 200 39.0
FAN23G1893 Fragaria x ananassa HOM05D004023 ORTHO05D004681 7.8e-29 132.1 204 38.2
CSS0047726 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.0e-28 131.7 243 35.4
arahy.Tifrunner.gnm1.ann1.XHC94G Arachis hypogaea HOM05D004023 ORTHO05D004681 1.3e-28 131.3 201 40.3
CsaV3_1G041000 Cucumis sativus L. HOM05D004023 ORTHO05D004681 1.7e-28 131.0 202 38.1
Potri.006G142100 Populus trichocarpa HOM05D004023 ORTHO05D004681 2.3e-28 130.6 198 39.9
DCAR_031922 Daucus carota HOM05D004023 ORTHO05D004681 5.1e-28 129.4 198 39.9
VMungo1309G2832 Vigna mungo HOM05D004023 ORTHO05D004681 5.1e-28 129.4 182 42.9
Aa31sc133G50 Aethionema arabicum HOM05D004023 ORTHO05D004681 6.6e-28 129.0 184 40.2
arahy.Tifrunner.gnm1.ann1.KW18SN Arachis hypogaea HOM05D004023 ORTHO05D004681 6.6e-28 129.0 198 39.9
Gorai.010G088100 Gossypium raimondii HOM05D004023 ORTHO05D004681 8.6e-28 128.6 184 40.8
Nitab4.5_0005767g0010 Nicotiana tabacum HOM05D004023 ORTHO05D004681 8.6e-28 128.6 201 37.8
AT2G06025 Arabidopsis thaliana HOM05D004023 ORTHO05D004681 1.1e-27 128.3 184 40.2
Migut.L01563 Erythranthe guttata HOM05D004023 ORTHO05D004681 1.5e-27 127.9 202 38.6
Sabra06G0111200 Salix brachista HOM05D004023 ORTHO05D004681 1.5e-27 127.9 198 38.9
CARHR103710 Cardamine hirsuta HOM05D004023 ORTHO05D004681 1.9e-27 127.5 184 40.2
AL3G43670 Arabidopsis lyrata HOM05D004023 ORTHO05D004681 2.5e-27 127.1 184 39.7
arahy.Tifrunner.gnm1.ann1.KDYD97 Arachis hypogaea HOM05D004023 ORTHO05D004681 2.5e-27 127.1 204 39.7
Cc06_g12120 Coffea canephora HOM05D004023 ORTHO05D004681 3.3e-27 126.7 201 37.8
Psat1g134240 Pisum sativum HOM05D004023 ORTHO05D004681 4.3e-27 126.3 184 42.4
A07p06280 Brassica napus HOM05D004023 ORTHO05D004681 7.3e-27 125.6 184 39.1
BraA07t28423Z Brassica rapa HOM05D004023 ORTHO05D004681 7.3e-27 125.6 184 39.1
Carub.0003s2716 Capsella rubella HOM05D004023 ORTHO05D004681 7.3e-27 125.6 184 40.2
Aqoxy7G01044 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 1.2e-26 124.8 210 36.7
BcaC06g35952 Brassica carinata HOM05D004023 ORTHO05D004681 1.2e-26 124.8 184 39.1
BcaB06g26883 Brassica carinata HOM05D004023 ORTHO05D004681 2.1e-26 124.0 184 39.1
HanXRQChr09g0237831 Helianthus annuus HOM05D004023 ORTHO05D004681 3.6e-26 123.2 198 37.4
DCAR_024747 Daucus carota HOM05D004023 ORTHO05D004681 4.7e-26 122.9 181 41.4
Thhalv10002632m.g Eutrema salsugineum HOM05D004023 ORTHO05D004681 4.7e-26 122.9 184 38.0
ATR0598G151 Amborella trichopoda HOM05D004023 ORTHO05D004681 8.1e-26 122.1 202 38.1
ECA240G3187 Erigeron canadensis HOM05D004023 ORTHO05D004681 8.1e-26 122.1 228 32.9
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 8.1e-26 122.1 198 37.9
Peaxi162Scf00554g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 8.1e-26 122.1 201 37.3
BolC7t41351H Brassica oleracea HOM05D004023 ORTHO05D004681 1.1e-25 121.7 184 38.0
CDE05G0867 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 1.1e-25 121.7 184 40.2
Gorai.013G224500 Gossypium raimondii HOM05D004023 ORTHO05D004681 1.4e-25 121.3 198 36.9
Sc18g0002510 Simmondsia chinensis HOM05D004023 ORTHO05D004681 1.4e-25 121.3 199 38.7
PGSC0003DMG400027761 Solanum tuberosum HOM05D004023 ORTHO05D004681 2.3e-25 120.6 201 36.8
TWI34G0375 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 2.3e-25 120.6 203 38.9
Ciclev10009135m.g Citrus clementina HOM05D004023 ORTHO05D004681 3.1e-25 120.2 199 37.7
Nitab4.5_0000024g0190 Nicotiana tabacum HOM05D004023 ORTHO05D004681 3.1e-25 120.2 223 34.1
Gohir.D13G196385 Gossypium hirsutum HOM05D004023 ORTHO05D004681 4.0e-25 119.8 198 36.9
Gohir.A13G191000 Gossypium hirsutum HOM05D004023 ORTHO05D004681 5.2e-25 119.4 198 36.4
Sp3g24610 Schrenkiella parvula HOM05D004023 ORTHO05D004681 5.2e-25 119.4 184 38.6
CANSAT56G0673 Cannabis sativa HOM05D004023 ORTHO05D004681 8.9e-25 118.6 198 38.4
TWI63G1612 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 8.9e-25 118.6 201 38.8
vmacro06339 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 8.9e-25 118.6 172 42.4
Zm00001eb401920 Zea mays HOM05D004023 ORTHO05D004681 1.2e-24 118.2 182 41.2
Sed0007208 Sechium edule HOM05D004023 ORTHO05D004681 1.5e-24 117.9 184 37.0
PGR119G0815 Punica granatum HOM05D004023 ORTHO05D004681 5.8e-24 115.9 210 38.1
Actinidia24483 Actinidia chinensis HOM05D004023 ORTHO05D004681 7.6e-24 115.5 207 36.2
MSTRG.18474 Avicennia marina HOM05D004023 ORTHO05D004681 7.6e-24 115.5 208 37.0
Glyma.13G110200 Glycine max HOM05D004023 ORTHO05D004681 1.3e-23 114.8 206 36.4
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 2.2e-23 114.0 205 36.1
Nn8g38657 Nelumbo nucifera HOM05D004023 ORTHO05D004681 2.2e-23 114.0 155 40.6
SEGI_14760 Sequoiadendron giganteum HOM05D004023 ORTHO05D004681 2.2e-23 114.0 205 40.5
Sopen05g021320 Solanum pennellii HOM05D004023 ORTHO05D004681 2.2e-23 114.0 200 36.0
TAR369G0443 Trochodendron aralioides HOM05D004023 ORTHO05D004681 2.9e-23 113.6 203 38.4
Rhsim03G0227800 Rhododendron simsii HOM05D004023 ORTHO05D004681 4.9e-23 112.8 204 39.2
Os03g0177000 Oryza sativa ssp. japonica HOM05D004023 ORTHO05D004681 6.4e-23 112.5 182 37.9
Solyc05g025890.3 Solanum lycopersicum HOM05D004023 ORTHO05D004681 8.4e-23 112.1 200 35.5
GSVIVG01037415001 Vitis vinifera HOM05D004023 ORTHO05D004681 2.4e-22 110.5 205 35.6
MBI13_g41748_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 7.1e-22 109.0 186 37.6
vmacro04098 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 7.1e-22 109.0 214 34.6
PSO384G4677 Papaver somniferum HOM05D004023 ORTHO05D004681 9.2e-22 108.6 207 36.7
Cc01_g06740 Coffea canephora HOM05D004023 ORTHO05D004681 1.2e-21 108.2 208 35.6
Rhsim13G0202100 Rhododendron simsii HOM05D004023 ORTHO05D004681 1.2e-21 108.2 214 35.0
SalBow5G0641 Salvia bowleyana HOM05D004023 ORTHO05D004681 1.2e-21 108.2 206 35.0
Eucgr.J00649 Eucalyptus grandis HOM05D004023 ORTHO05D004681 1.6e-21 107.8 208 34.6
PGR142G0045 Punica granatum HOM05D004023 ORTHO05D004681 1.6e-21 107.8 204 34.3
Hma1.2p1_1711F.1_g298750 Hydrangea macrophylla HOM05D004023 ORTHO05D004681 2.1e-21 107.5 206 35.0
MBI13_g42818_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 2.1e-21 107.5 193 35.2
Migut.D00690 Erythranthe guttata HOM05D004023 ORTHO05D004681 2.7e-21 107.1 207 34.8
Solyc12g099940.2 Solanum lycopersicum HOM05D004023 ORTHO05D004681 2.7e-21 107.1 207 35.7
Sopen12g034560 Solanum pennellii HOM05D004023 ORTHO05D004681 2.7e-21 107.1 207 35.7
HPP92_013291 Vanilla planifolia HOM05D004023 ORTHO05D004681 3.5e-21 106.7 179 39.7
HanXRQChr14g0431991 Helianthus annuus HOM05D004023 ORTHO05D004681 6.0e-21 105.9 186 36.6
Hund08779 Selenicereus undatus HOM05D004023 ORTHO05D004681 6.0e-21 105.9 155 39.4
PGSC0003DMG400004653 Solanum tuberosum HOM05D004023 ORTHO05D004681 1.0e-20 105.1 207 35.3
DCAR_006328 Daucus carota HOM05D004023 ORTHO05D004681 3.0e-20 103.6 185 36.2
Phvul.003G131100 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 3.0e-20 103.6 189 33.9
Aqoxy1G00042 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 5.1e-20 102.8 186 37.1
C07p09330 Brassica napus HOM05D004023 ORTHO05D004681 6.6e-20 102.4 156 37.8
AUR62003487 Chenopodium quinoa HOM05D004023 ORTHO05D004681 6.6e-20 102.4 201 33.8
PSO339G3635 Papaver somniferum HOM05D004023 ORTHO05D004681 6.6e-20 102.4 207 33.3
Ah.03g147260 Amaranthus hybridus HOM05D004023 ORTHO05D004681 8.6e-20 102.1 203 34.5
ClCG03G015110 Citrullus lanatus HOM05D004023 ORTHO05D004681 1.9e-19 100.9 190 34.7
CAN.G484.8 Capsicum annuum HOM05D004023 ORTHO05D004681 4.3e-19 99.8 207 34.8
AUR62017796 Chenopodium quinoa HOM05D004023 ORTHO05D004681 4.3e-19 99.8 200 32.0
Nitab4.5_0001925g0260 Nicotiana tabacum HOM05D004023 ORTHO05D004681 5.6e-19 99.4 184 37.5
Zm00001eb401960 Zea mays HOM05D004023 ORTHO05D004681 5.6e-19 99.4 161 41.6
Lsat_1_v5_gn_2_38101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.1e-18 97.4 182 34.6
Oeu020552.2 Olea europaea HOM05D004023 ORTHO05D004681 2.1e-18 97.4 113 45.1
Lj4A912T25 Lonicera japonica HOM05D004023 ORTHO05D004681 3.6e-18 96.7 224 34.8
Mapoly0023s0080 Marchantia polymorpha HOM05D004023 ORTHO05D004681 1.8e-17 94.4 235 28.9
Duzib168G1033 Durio zibethinus HOM05D004023 ORTHO05D004681 6.9e-17 92.4 194 32.0
Hund12723 Selenicereus undatus HOM05D004023 ORTHO05D004681 8.9e-17 92.0 204 32.4
Manes.03G040200 Manihot esculenta HOM05D004023 ORTHO05D004681 1.2e-16 91.7 194 32.5
Peaxi162Scf00062g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 2.0e-16 90.9 136 39.0
SGA_v2.0_scaffold29G12111 Striga asiatica HOM05D004023 ORTHO05D004681 5.8e-16 89.4 137 36.5
EL10Ac8g19063 Beta vulgaris HOM05D004023 ORTHO05D004681 6.4e-15 85.9 241 29.0
Glyma.17G049500 Glycine max HOM05D004023 ORTHO05D004681 5.4e-14 82.8 167 35.3
unitig_60.g25636 Utricularia gibba HOM05D004023 ORTHO05D004681 1.2e-13 81.6 214 31.3
Cpa.g.sc28.45 Carica papaya HOM05D004023 ORTHO05D004681 6.0e-13 79.3 105 41.9
unitig_0.g313 Utricularia gibba HOM05D004023 ORTHO05D004681 6.0e-13 79.3 202 31.2
SMO200G0269 Selaginella moellendorffii HOM05D004023 ORTHO05D004681 5.1e-12 76.3 178 30.9
Gohir.D06G075200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 8.7e-12 75.5 132 35.6
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 1.9e-11 74.3 210 29.0
EL10Ac6g15385 Beta vulgaris HOM05D004023 ORTHO05D004681 7.3e-11 72.4 122 34.4
arahy.Tifrunner.gnm1.ann1.NU1P8G Arachis hypogaea HOM05D004023 ORTHO05D004681 1.1e-09 68.6 90 42.2
Nitab4.5_0011805g0030 Nicotiana tabacum HOM05D004023 ORTHO05D004681 1.8e-09 67.8 196 30.6
Sed0008804 Sechium edule HOM05D004023 ORTHO05D004681 3.1e-09 67.0 197 27.9
Zm00001eb408770 Zea mays HOM05D004023 ORTHO05D004681 5.3e-09 66.2 101 38.6
MELO3C015518.2 Cucumis melo HOM05D004023 ORTHO05D004681 2.6e-08 63.9 102 35.3
Pp3c12_9920 Physcomitrium patens HOM05D004023 ORTHO05D004681 1.3e-07 61.6 202 28.7
SalBow6G6388 Salvia bowleyana HOM05D004023 ORTHO05D004681 6.4e-07 59.3 105 39.0
Sc08g0005630 Simmondsia chinensis HOM05D005733 ORTHO05D007442 1.1e-06 58.5 212 25.9
Lj2C939G1 Lonicera japonica HOM05D004023 ORTHO05D004681 2.4e-06 57.4 106 37.7
Mapoly0019s0038 Marchantia polymorpha HOM05D005733 ORTHO05D007442 4.2e-06 56.6 204 28.9


User provided reference genes

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