Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 2.3e-176 622.1 309 100.0
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 2.8e-174 615.1 309 98.7
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.2e-145 520.0 309 80.3
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 2.6e-143 512.3 310 79.4
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 8.3e-142 507.3 309 79.0
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 3.5e-140 501.9 310 77.1
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.3e-139 500.0 310 76.8
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 1.9e-138 496.1 309 76.1
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 7.3e-138 494.2 313 76.7
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 7.3e-138 494.2 309 77.0
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.6e-137 493.0 310 75.5
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 6.8e-136 487.6 309 74.4
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 6.8e-136 487.6 306 74.2
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.2e-135 486.9 309 74.8
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 7.6e-135 484.2 310 74.8
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.3e-134 483.4 310 75.2
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 2.2e-134 482.6 306 73.9
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 2.9e-134 482.3 310 74.2
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 6.4e-134 481.1 305 74.1
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 8.3e-134 480.7 311 74.0
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 8.3e-134 480.7 310 74.2
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 1.1e-133 480.3 310 72.9
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 4.1e-133 478.4 309 72.8
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 7.1e-133 477.6 310 74.2
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 9.2e-133 477.2 309 73.1
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 1.6e-132 476.5 310 74.5
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 1.6e-132 476.5 312 74.4
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.1e-132 476.1 309 73.5
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.1e-132 476.1 309 73.5
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 2.7e-132 475.7 309 73.5
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 2.7e-132 475.7 310 73.5
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 4.6e-132 474.9 317 71.9
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 4.6e-132 474.9 309 72.2
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 7.8e-132 474.2 309 72.5
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 1.0e-131 473.8 309 71.5
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 2.3e-131 472.6 306 72.2
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.0e-131 472.2 306 72.5
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 3.9e-131 471.9 309 75.1
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 8.6e-131 470.7 306 72.2
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.1e-130 470.3 309 73.1
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.5e-130 469.9 309 71.8
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 2.5e-130 469.2 325 70.2
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 4.3e-130 468.4 306 71.9
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 5.6e-130 468.0 309 71.8
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 9.6e-130 467.2 304 72.7
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 1.2e-129 466.8 306 72.2
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 1.2e-129 466.8 310 70.6
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 4.7e-129 464.9 314 72.0
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 6.2e-129 464.5 310 71.3
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 8.1e-129 464.2 302 73.5
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 1.1e-128 463.8 308 71.8
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 1.4e-128 463.4 304 72.7
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 2.4e-128 462.6 306 73.2
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 3.1e-128 462.2 305 70.5
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.1e-128 462.2 310 71.6
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.1e-128 462.2 310 71.6
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 1.2e-127 460.3 310 70.6
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.0e-127 459.5 310 70.6
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 2.0e-127 459.5 305 70.2
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 5.8e-127 458.0 305 72.1
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 7.6e-127 457.6 310 70.3
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 7.6e-127 457.6 305 72.5
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 2.9e-126 455.7 305 71.8
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.8e-126 455.3 309 70.9
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 3.8e-126 455.3 305 70.2
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 4.9e-126 454.9 310 69.7
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 6.4e-126 454.5 310 70.0
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 6.4e-126 454.5 305 71.5
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 6.4e-126 454.5 304 72.0
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.1e-125 453.8 310 70.3
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 1.9e-125 453.0 305 70.5
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 1.9e-125 453.0 304 71.7
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 2.4e-125 452.6 311 70.1
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 5.4e-125 451.4 305 71.5
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 1.6e-124 449.9 311 70.4
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 6.0e-124 448.0 307 69.1
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 1.7e-123 446.4 387 58.9
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 2.3e-123 446.0 305 68.9
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.3e-123 446.0 306 69.9
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 6.6e-123 444.5 306 71.2
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.5e-122 443.4 281 74.0
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 2.5e-122 442.6 350 62.9
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 4.3e-122 441.8 305 68.9
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 7.3e-122 441.0 311 68.5
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 7.3e-122 441.0 311 68.5
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 6.2e-121 438.0 272 75.4
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 6.2e-121 438.0 305 68.2
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 1.4e-120 436.8 308 69.8
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 4.0e-120 435.3 326 66.3
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.0e-119 433.0 311 68.2
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.7e-118 429.9 328 63.1
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.1e-117 427.2 346 63.3
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 9.3e-117 424.1 305 65.2
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 1.2e-116 423.7 306 68.6
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.1e-114 417.2 309 68.3
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 1.4e-112 410.2 307 63.8
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 5.3e-112 408.3 298 66.8
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 1.2e-111 407.1 265 74.7
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.5e-106 390.2 240 77.5
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 4.3e-106 388.7 285 67.0
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 2.0e-103 379.8 245 74.3
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 1.3e-102 377.1 251 72.9
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 4.6e-100 368.6 309 60.5
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 6.0e-100 368.2 306 61.1
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 5.5e-93 345.1 241 67.2
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 7.4e-90 334.7 209 74.2
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 1.5e-87 327.0 301 54.5
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 8.5e-86 321.2 228 68.4
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 1.2e-84 317.4 306 53.9
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 4.8e-81 305.4 303 52.5
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 2.3e-75 286.6 293 49.8
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.6e-68 263.8 292 46.9
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 3.4e-58 229.6 180 58.9
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 9.8e-58 228.0 319 44.2
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 8.3e-57 224.9 148 74.3
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 1.0e-54 218.0 291 41.9
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 2.2e-54 216.9 146 74.0
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 5.5e-53 212.2 156 62.2
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 4.1e-40 169.5 185 50.8
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 5.0e-38 162.5 149 54.4
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.1e-37 161.4 149 57.0
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 7.5e-34 148.7 106 64.2
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 3.2e-32 143.3 96 68.8
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 7.3e-29 132.1 100 64.0
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.1e-19 100.1 67 67.2
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.2e-19 99.4 70 65.7
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 3.4e-18 96.7 69 65.2
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 4.4e-18 96.3 58 74.1
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 5.8e-18 95.9 64 68.8


User provided reference genes

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