Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0840 Papaver somniferum HOM05D000395 ORTHO05D000088 1.0e-97 360.1 187 100.0
PSO675G1151 Papaver somniferum HOM05D000395 ORTHO05D000088 4.7e-63 245.0 222 65.3
PSO541G4259 Papaver somniferum HOM05D000395 ORTHO05D000088 1.8e-59 233.0 212 63.2
PSO675G6904 Papaver somniferum HOM05D000395 ORTHO05D000088 3.9e-25 119.0 208 42.3
PSO541G3694 Papaver somniferum HOM05D000395 ORTHO05D000088 1.1e-22 110.9 132 53.8
Cfa015909 Carpinus fangiana HOM05D000395 ORTHO05D000088 1.2e-13 80.9 222 30.2
Thecc.01G047200 Theobroma cacao HOM05D000395 ORTHO05D000088 4.4e-13 79.0 221 31.2
Cfa015902 Carpinus fangiana HOM05D000395 ORTHO05D000088 3.7e-12 75.9 117 39.3
Thecc.01G046900 Theobroma cacao HOM05D000395 ORTHO05D000088 4.9e-12 75.5 237 28.3
Lj7A19G29 Lonicera japonica HOM05D000395 ORTHO05D000088 6.4e-12 75.1 215 30.2
COL.COLO4_11359 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.9e-11 73.6 211 30.8
CiPaw.02G012600 Carya illinoinensis HOM05D000395 ORTHO05D000088 2.4e-11 73.2 243 26.7
Lj7C16T13 Lonicera japonica HOM05D000395 ORTHO05D000088 2.4e-11 73.2 215 29.8
QL09p026229 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-11 73.2 209 31.1
Gohir.A02G160900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 3.2e-11 72.8 228 29.8
Cfa015905 Carpinus fangiana HOM05D005492 ORTHO05D000088 4.1e-11 72.4 67 55.2
QL09p026224 Quercus lobata HOM05D000395 ORTHO05D000088 5.4e-11 72.0 212 29.7
Cfa015900 Carpinus fangiana HOM05D000395 ORTHO05D000088 7.1e-11 71.6 212 29.2
COL.COLO4_11082 Corchorus olitorius HOM05D000395 ORTHO05D000088 7.1e-11 71.6 208 28.4
Gohir.D03G019600 Gossypium hirsutum HOM05D000395 ORTHO05D000088 7.1e-11 71.6 228 29.8
Gorai.003G020000 Gossypium raimondii HOM05D000395 ORTHO05D000088 7.1e-11 71.6 228 29.8
Gohir.A12G067500 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.2e-11 71.2 228 28.1
Gorai.008G071300 Gossypium raimondii HOM05D000395 ORTHO05D000088 9.2e-11 71.2 239 27.6
CiPaw.05G236600 Carya illinoinensis HOM05D000395 ORTHO05D000088 2.1e-10 70.1 220 30.0
Cfa015903 Carpinus fangiana HOM05D000395 ORTHO05D000088 2.7e-10 69.7 213 29.1
FvH4_1g14700 Fragaria vesca HOM05D000395 ORTHO05D000088 3.5e-10 69.3 238 29.4
Gohir.A10G093700 Gossypium hirsutum HOM05D000395 ORTHO05D000088 4.6e-10 68.9 225 26.7
Gohir.D12G067900 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.0e-10 68.6 236 27.5
COL.COLO4_11372 Corchorus olitorius HOM05D000395 ORTHO05D000088 7.8e-10 68.2 209 29.2
Gohir.D12G067800 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.0e-09 67.8 101 39.6
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 1.0e-09 67.8 210 28.1
COL.COLO4_03592 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.3e-09 67.4 179 30.7
Cfa015899 Carpinus fangiana HOM05D000395 ORTHO05D000088 1.7e-09 67.0 205 30.2
Duzib147G0434 Durio zibethinus HOM05D000395 ORTHO05D000088 2.3e-09 66.6 216 28.7
FAN09G2039 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.0e-09 66.2 76 48.7
Gohir.A12G067300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 3.0e-09 66.2 101 38.6
Gorai.008G071200 Gossypium raimondii HOM05D000395 ORTHO05D000088 3.0e-09 66.2 101 38.6
Lj7A19T32 Lonicera japonica HOM05D000395 ORTHO05D000088 3.0e-09 66.2 213 29.1
PSO339G4662 Papaver somniferum HOM05D000395 ORTHO05D000088 3.0e-09 66.2 211 30.8
Thecc.01G047000 Theobroma cacao HOM05D000395 ORTHO05D000088 3.0e-09 66.2 229 27.5
Gorai.003G020800 Gossypium raimondii HOM05D000395 ORTHO05D000088 3.9e-09 65.9 221 28.5
QL09p026061 Quercus lobata HOM05D000395 ORTHO05D000088 5.1e-09 65.5 226 29.2
COL.COLO4_22195 Corchorus olitorius HOM05D000395 ORTHO05D000088 6.6e-09 65.1 240 27.1
COL.COLO4_33145 Corchorus olitorius HOM05D000395 ORTHO05D000088 6.6e-09 65.1 101 35.6
PSO017G7380 Papaver somniferum HOM05D000395 ORTHO05D000088 6.6e-09 65.1 168 34.5
QL09p026034 Quercus lobata HOM05D000395 ORTHO05D000088 8.6e-09 64.7 209 26.8
COL.COLO4_11373 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.1e-08 64.3 243 27.6
COL.COLO4_22199 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.1e-08 64.3 101 35.6
COL.COLO4_22201 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.1e-08 64.3 211 28.4
Thecc.02G092800 Theobroma cacao HOM05D000395 ORTHO05D000088 1.1e-08 64.3 102 39.2
Gohir.A12G068300 Gossypium hirsutum HOM05D000395 ORTHO05D000088 1.5e-08 63.9 197 27.9
MD02G1159700 Malus domestica HOM05D000395 ORTHO05D000088 1.5e-08 63.9 218 27.1
MD02G1159800 Malus domestica HOM05D000395 ORTHO05D000088 1.5e-08 63.9 218 28.4
Glyma.04G256951 Glycine max HOM05D000395 ORTHO05D000088 1.9e-08 63.5 108 36.1
Gorai.008G071600 Gossypium raimondii HOM05D000395 ORTHO05D000088 1.9e-08 63.5 224 28.6
Manes.07G112905 Manihot esculenta HOM05D000395 ORTHO05D000088 1.9e-08 63.5 205 29.3
Nn6g32143 Nelumbo nucifera HOM05D000395 ORTHO05D000088 1.9e-08 63.5 112 34.8
PSO339G4062 Papaver somniferum HOM05D000395 ORTHO05D000088 2.5e-08 63.2 220 30.0
FvH4_7g33560 Fragaria vesca HOM05D000395 ORTHO05D000088 4.3e-08 62.4 113 34.5
CiPaw.06G020200 Carya illinoinensis HOM05D000395 ORTHO05D000088 5.6e-08 62.0 215 30.2
FAN10G1086 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.6e-08 62.0 113 34.5
FAN10G3733 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.6e-08 62.0 113 34.5
PSO541G5266 Papaver somniferum HOM05D000395 ORTHO05D000088 5.6e-08 62.0 240 28.8
QL02p075828 Quercus lobata HOM05D000395 ORTHO05D000088 5.6e-08 62.0 101 34.7
TAR381G0288 Trochodendron aralioides HOM05D000395 ORTHO05D000088 5.6e-08 62.0 120 34.2
Actinidia27927 Actinidia chinensis HOM05D000395 ORTHO05D000088 7.3e-08 61.6 113 33.6
Manes.13G130950 Manihot esculenta HOM05D000395 ORTHO05D000088 7.3e-08 61.6 216 27.8
QL09p026137 Quercus lobata HOM05D000395 ORTHO05D000088 7.3e-08 61.6 206 27.2
Gohir.A02G160850 Gossypium hirsutum HOM05D000395 ORTHO05D000088 9.6e-08 61.2 235 27.7
QL10p038826 Quercus lobata HOM05D000395 ORTHO05D000088 9.6e-08 61.2 220 26.8
COL.COLO4_27399 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.2e-07 60.8 220 27.7
FvH4_7g07610 Fragaria vesca HOM05D000395 ORTHO05D000088 1.2e-07 60.8 174 28.7
QL06p036952 Quercus lobata HOM05D000395 ORTHO05D000088 1.2e-07 60.8 179 27.9
Atru.chr5.2850 Acer truncatum HOM05D000395 ORTHO05D000088 1.6e-07 60.5 212 25.5
PSO170G1007 Papaver somniferum HOM05D000395 ORTHO05D000088 1.6e-07 60.5 101 35.6
Thecc.02G092400 Theobroma cacao HOM05D000395 ORTHO05D000088 1.6e-07 60.5 102 38.2
FAN06G2119 Fragaria x ananassa HOM05D000395 ORTHO05D000088 2.1e-07 60.1 101 34.7
ClCG09G017670 Citrullus lanatus HOM05D000395 ORTHO05D000088 2.8e-07 59.7 113 32.7
COL.COLO4_22726 Corchorus olitorius HOM05D000395 ORTHO05D000088 2.8e-07 59.7 100 33.0
DCAR_003838 Daucus carota HOM05D000395 ORTHO05D000088 2.8e-07 59.7 193 28.5
CANSAT01G0582 Cannabis sativa HOM05D000395 ORTHO05D000088 3.6e-07 59.3 216 28.2
CANSAT01G3168 Cannabis sativa HOM05D000395 ORTHO05D000088 3.6e-07 59.3 199 29.6
CsaV3_2G014280 Cucumis sativus L. HOM05D000395 ORTHO05D000088 3.6e-07 59.3 113 31.9
FAN10G2931 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.6e-07 59.3 183 28.4
Lalb_Chr01g0003031 Lupinus albus HOM05D000395 ORTHO05D000088 3.6e-07 59.3 99 36.4
PSO675G3266 Papaver somniferum HOM05D000395 ORTHO05D000088 3.6e-07 59.3 244 28.3
QL09p026069 Quercus lobata HOM05D000395 ORTHO05D000088 3.6e-07 59.3 207 27.5
Medtr3g005480 Medicago truncatula HOM05D000395 ORTHO05D000088 4.7e-07 58.9 101 39.6
PGR102G2424 Punica granatum HOM05D000395 ORTHO05D000088 4.7e-07 58.9 220 28.2
QL05p056144 Quercus lobata HOM05D000395 ORTHO05D000088 4.7e-07 58.9 136 30.9
QL10p058022 Quercus lobata HOM05D000395 ORTHO05D000088 4.7e-07 58.9 136 30.9
RcHm_v2.0_Chr2g0134821 Rosa chinensis HOM05D000395 ORTHO05D000088 4.7e-07 58.9 108 34.3
TWI12G0040 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 4.7e-07 58.9 212 27.8
Eucgr.L02216 Eucalyptus grandis HOM05D000395 ORTHO05D000088 6.2e-07 58.5 101 34.7
Gohir.A02G160766 Gossypium hirsutum HOM05D000395 ORTHO05D000088 6.2e-07 58.5 187 33.2
Prupe.7G143600 Prunus persica HOM05D000395 ORTHO05D000088 6.2e-07 58.5 111 34.2
QL02p075847 Quercus lobata HOM05D000395 ORTHO05D000088 6.2e-07 58.5 253 25.3
QL03p000468 Quercus lobata HOM05D000395 ORTHO05D000088 6.2e-07 58.5 210 27.6
QL03p067026 Quercus lobata HOM05D000395 ORTHO05D000088 6.2e-07 58.5 210 27.6
QL07p012019 Quercus lobata HOM05D000176 ORTHO05D000106 6.2e-07 58.5 210 27.1
QL07p047587 Quercus lobata HOM05D000395 ORTHO05D000088 6.2e-07 58.5 210 27.6
QL08p007747 Quercus lobata HOM05D000395 ORTHO05D000088 6.2e-07 58.5 210 27.6
Atru.chr5.2849 Acer truncatum HOM05D000395 ORTHO05D000088 8.1e-07 58.2 113 32.7
Ca_13967_v3 Cicer arietinum L. HOM05D000395 ORTHO05D000088 8.1e-07 58.2 111 33.3
COL.COLO4_30629 Corchorus olitorius HOM05D000395 ORTHO05D000088 8.1e-07 58.2 216 25.5
Eucgr.H01965 Eucalyptus grandis HOM05D000395 ORTHO05D000088 8.1e-07 58.2 210 26.7
Gohir.D12G068000 Gossypium hirsutum HOM05D000395 ORTHO05D000088 8.1e-07 58.2 94 35.1
Medtr5g070440 Medicago truncatula HOM05D000395 ORTHO05D000088 8.1e-07 58.2 101 34.7
PGR102G2876 Punica granatum HOM05D000395 ORTHO05D000088 8.1e-07 58.2 210 27.1
TWI73G1024 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 8.1e-07 58.2 110 30.9
Ciclev10028858m.g Citrus clementina HOM05D000395 ORTHO05D000088 1.1e-06 57.8 100 33.0
COL.COLO4_22200 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.1e-06 57.8 197 28.4
Eucgr.D00268 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-06 57.8 227 26.0
Eucgr.D00269 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-06 57.8 223 26.0
Eucgr.G01517 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.1e-06 57.8 160 29.4
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 1.1e-06 57.8 218 29.8
FAN19G3035 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.1e-06 57.8 218 29.8
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 1.1e-06 57.8 137 29.9
TWI09G0341 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 1.1e-06 57.8 261 24.9
CANSAT01G2954 Cannabis sativa HOM05D000395 ORTHO05D000088 1.4e-06 57.4 214 28.0
COL.COLO4_30632 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.4e-06 57.4 217 27.6
MELO3C021929.2 Cucumis melo HOM05D000395 ORTHO05D000088 1.4e-06 57.4 113 31.0
Manes.10G031300 Manihot esculenta HOM05D000395 ORTHO05D000088 1.4e-06 57.4 237 25.7
Manes.10G033300 Manihot esculenta HOM05D000395 ORTHO05D000088 1.4e-06 57.4 205 27.3
PSO675G3530 Papaver somniferum HOM05D000395 ORTHO05D000088 1.4e-06 57.4 101 35.6
Prupe.7G143500 Prunus persica HOM05D000395 ORTHO05D000088 1.4e-06 57.4 108 32.4
QL09p026053 Quercus lobata HOM05D000395 ORTHO05D000088 1.4e-06 57.4 109 34.9
RcHm_v2.0_Chr2g0103551 Rosa chinensis HOM05D000395 ORTHO05D000088 1.4e-06 57.4 229 27.9
Thecc.01G047100 Theobroma cacao HOM05D000395 ORTHO05D000088 1.4e-06 57.4 222 25.7
CANSAT01G0530 Cannabis sativa HOM05D000395 ORTHO05D000088 1.8e-06 57.0 223 28.7
Ciclev10028745m.g Citrus clementina HOM05D000395 ORTHO05D000088 1.8e-06 57.0 111 30.6
Eucgr.B02809 Eucalyptus grandis HOM05D000395 ORTHO05D000088 1.8e-06 57.0 77 41.6
FAN01G0085 Fragaria x ananassa HOM05D000395 ORTHO05D000088 1.8e-06 57.0 224 24.1
QL02p083510 Quercus lobata HOM05D000395 ORTHO05D000088 1.8e-06 57.0 121 32.2
COL.COLO4_27400 Corchorus olitorius HOM05D000395 ORTHO05D000088 2.4e-06 56.6 221 27.6
QL09p000034 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-06 56.6 210 27.1
QL09p042765 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-06 56.6 210 27.1
QL93p0128_0020 Quercus lobata HOM05D000395 ORTHO05D000088 2.4e-06 56.6 210 27.1
Sed0004402 Sechium edule HOM05D000395 ORTHO05D000088 2.4e-06 56.6 136 29.4
Atru.chr5.2852 Acer truncatum HOM05D000395 ORTHO05D000088 3.1e-06 56.2 219 26.0
CANSAT01G0224 Cannabis sativa HOM05D000395 ORTHO05D000088 3.1e-06 56.2 229 25.8
FAN03G2610 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 56.2 99 33.3
FAN28G0564 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.1e-06 56.2 218 29.8
MD15G1302000 Malus domestica HOM05D000395 ORTHO05D000088 3.1e-06 56.2 228 27.2
Medtr3g005490 Medicago truncatula HOM05D000395 ORTHO05D000088 3.1e-06 56.2 101 37.6
PGR042G1584 Punica granatum HOM05D000395 ORTHO05D000088 3.1e-06 56.2 226 29.2
RcHm_v2.0_Chr1g0383811 Rosa chinensis HOM05D000395 ORTHO05D000088 3.1e-06 56.2 112 33.0
ClCG07G017280 Citrullus lanatus HOM05D000395 ORTHO05D000088 4.0e-06 55.8 102 31.4
MELO3C017619.2 Cucumis melo HOM05D000395 ORTHO05D000088 4.0e-06 55.8 111 30.6
FvH4_1g14650 Fragaria vesca HOM05D000395 ORTHO05D000088 4.0e-06 55.8 174 28.2
FAN03G2926 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.0e-06 55.8 230 25.2
FAN23G2287 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.0e-06 55.8 110 31.8
QL04p015528 Quercus lobata HOM05D000176 ORTHO05D000106 4.0e-06 55.8 210 26.7
QL05p084622 Quercus lobata HOM05D000395 ORTHO05D000088 4.0e-06 55.8 228 25.9
QL06p043901 Quercus lobata HOM05D000395 ORTHO05D000088 4.0e-06 55.8 229 27.9
QL09p000211 Quercus lobata HOM05D000395 ORTHO05D000088 4.0e-06 55.8 208 26.9
Sed0019996 Sechium edule HOM05D000395 ORTHO05D000088 4.0e-06 55.8 113 31.9
Eucgr.G00890 Eucalyptus grandis HOM05D000395 ORTHO05D000088 5.2e-06 55.5 221 28.1
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 5.2e-06 55.5 223 26.9
Lj7A17T43 Lonicera japonica HOM05D000395 ORTHO05D000088 5.2e-06 55.5 208 26.9
PSO384G3897 Papaver somniferum HOM05D000395 ORTHO05D000088 5.2e-06 55.5 218 27.1
Phvul.005G000700 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 5.2e-06 55.5 101 36.6
Potri.004G147200 Populus trichocarpa HOM05D000395 ORTHO05D000088 5.2e-06 55.5 126 31.7
Prupe.7G039600 Prunus persica HOM05D000395 ORTHO05D000088 5.2e-06 55.5 109 34.9
RcHm_v2.0_Chr1g0343041 Rosa chinensis HOM05D000395 ORTHO05D000088 5.2e-06 55.5 110 32.7
Cpa.g.sc132.62 Carica papaya HOM05D000395 ORTHO05D000088 6.8e-06 55.1 217 25.3
Ciclev10029384m.g Citrus clementina HOM05D000395 ORTHO05D000088 6.8e-06 55.1 122 32.8
Lj7A16G28 Lonicera japonica HOM05D000395 ORTHO05D000088 6.8e-06 55.1 193 26.9
Lalb_Chr19g0126231 Lupinus albus HOM05D000395 ORTHO05D000088 6.8e-06 55.1 211 26.1
MD15G1274400 Malus domestica HOM05D000395 ORTHO05D000088 6.8e-06 55.1 225 25.8
Potri.010G191500 Populus trichocarpa HOM05D000395 ORTHO05D000088 6.8e-06 55.1 220 26.4
QL01p054148 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
QL02p058028 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
QL02p097973 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
QL04p085714 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
QL05p019978 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
QL07p009243 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 136 30.1
QL08p006800 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 136 30.1
QL08p030552 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 121 32.2
QL10p055235 Quercus lobata HOM05D000395 ORTHO05D000088 6.8e-06 55.1 210 27.1
TWI09G0601 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 6.8e-06 55.1 100 30.0
TWI12G0089 Tripterygium wilfordii HOM05D000395 ORTHO05D000088 6.8e-06 55.1 212 25.9
Actinidia00479 Actinidia chinensis HOM05D000395 ORTHO05D005106 8.9e-06 54.7 110 35.5
Gohir.D12G068150 Gossypium hirsutum HOM05D000395 ORTHO05D000088 8.9e-06 54.7 217 25.8
Manes.15G145200 Manihot esculenta HOM05D000395 ORTHO05D000088 8.9e-06 54.7 114 31.6
QL03p054838 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-06 54.7 180 25.6
QL05p085016 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-06 54.7 225 26.2
QL07p009373 Quercus lobata HOM05D000395 ORTHO05D000088 8.9e-06 54.7 210 27.1
Sed0017286 Sechium edule HOM05D000395 ORTHO05D000088 8.9e-06 54.7 113 32.7


User provided reference genes

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