Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 1.6e-105 386.0 182 100.0
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 3.6e-100 368.2 182 94.5
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.2e-58 230.3 141 70.2
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 4.4e-58 228.4 166 63.3
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 1.3e-57 226.9 139 71.9
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.9e-57 224.9 153 66.0
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 4.9e-57 224.9 128 75.0
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 4.1e-56 221.9 128 73.4
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 5.4e-56 221.5 132 70.5
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 9.2e-56 220.7 126 73.0
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 3.5e-55 218.8 176 56.8
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 4.6e-55 218.4 134 67.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 5.9e-55 218.0 149 63.8
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 1.7e-54 216.5 142 68.3
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 1.7e-54 216.5 133 70.7
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 5.0e-54 214.9 148 64.9
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 5.0e-54 214.9 166 62.7
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 6.6e-54 214.5 149 61.7
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.9e-53 213.0 162 58.0
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 2.5e-53 212.6 130 67.7
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.5e-53 212.6 149 63.1
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 3.3e-53 212.2 146 63.0
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.3e-53 211.8 153 62.7
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 4.3e-53 211.8 149 63.1
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 5.6e-53 211.5 144 63.2
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 5.6e-53 211.5 153 62.7
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 9.5e-53 210.7 149 62.4
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.2e-52 210.3 127 68.5
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.2e-52 210.3 138 63.8
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 2.1e-52 209.5 126 70.6
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 2.1e-52 209.5 135 66.7
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.1e-52 209.5 147 63.3
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 2.1e-52 209.5 126 69.0
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 4.7e-52 208.4 143 63.6
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 4.7e-52 208.4 141 66.0
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 6.2e-52 208.0 139 64.7
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 8.0e-52 207.6 162 58.6
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 1.0e-51 207.2 126 70.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.8e-51 206.5 162 60.5
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 1.8e-51 206.5 125 69.6
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 1.8e-51 206.5 143 60.1
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.3e-51 206.1 138 64.5
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 3.1e-51 205.7 154 63.6
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 4.0e-51 205.3 162 58.0
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 5.2e-51 204.9 182 57.7
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 8.9e-51 204.1 128 65.6
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 1.2e-50 203.8 144 59.0
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.2e-50 203.8 183 53.0
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 1.2e-50 203.8 127 66.9
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 1.5e-50 203.4 178 53.9
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.5e-50 203.4 124 64.5
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 2.0e-50 203.0 125 65.6
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 2.6e-50 202.6 144 62.5
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 3.4e-50 202.2 163 56.4
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 3.4e-50 202.2 181 55.8
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 7.5e-50 201.1 129 63.6
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 9.8e-50 200.7 153 61.4
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 1.3e-49 200.3 153 57.5
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.3e-49 200.3 161 57.1
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.3e-49 200.3 158 56.3
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.3e-49 200.3 126 66.7
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.3e-49 200.3 116 72.4
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.7e-49 199.9 142 60.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.2e-49 199.5 149 57.7
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.9e-49 198.4 170 52.4
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.4e-48 196.8 145 60.7
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.4e-48 196.1 118 67.8
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 4.1e-48 195.3 185 53.5
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 7.0e-48 194.5 145 60.0
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.0e-48 194.5 145 60.0
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.0e-48 194.5 145 60.0
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 7.0e-48 194.5 145 59.3
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 6.0e-47 191.4 168 53.0
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.0e-46 190.7 168 52.4
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.9e-45 186.4 161 53.4
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 7.3e-45 184.5 160 53.8
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.8e-43 179.9 118 62.7
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 6.8e-43 177.9 123 61.0
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 1.2e-42 177.2 120 60.8
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.2e-41 172.9 110 66.4
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 8.3e-41 171.0 122 59.8
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.4e-40 170.2 144 56.2
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 9.2e-40 167.5 112 65.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 7.8e-39 164.5 121 55.4
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 1.0e-38 164.1 147 47.6
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 2.5e-37 159.5 123 59.3
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.3e-37 158.7 98 64.3
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 3.6e-36 155.6 130 55.4
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 1.8e-35 153.3 123 57.7
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 5.2e-35 151.8 134 54.5
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 8.9e-35 151.0 88 72.7
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 2.9e-33 146.0 136 52.2
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 3.8e-33 145.6 134 53.0
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 2.7e-31 139.4 155 45.2
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 5.6e-29 131.7 95 62.1
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.0e-26 123.2 86 58.1
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.5e-18 97.1 56 71.4
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 7.4e-13 78.2 49 67.3
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 1.4e-11 73.9 166 26.5
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.0e-11 72.4 97 41.2
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 9.0e-11 71.2 59 61.0


User provided reference genes

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