Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0821 Papaver somniferum HOM05D002214 ORTHO05D005113 4.1e-104 381.3 185 100.0
PSO339G2935 Papaver somniferum HOM05D002214 ORTHO05D005113 3.6e-76 288.5 185 76.8
PSO339G2857 Papaver somniferum HOM05D002214 ORTHO05D005113 2.4e-67 259.2 233 59.7
PSO384G1687 Papaver somniferum HOM05D002214 ORTHO05D005113 3.4e-66 255.4 165 76.4
PSO339G3802 Papaver somniferum HOM05D002214 ORTHO05D005113 7.9e-55 217.6 156 68.6
PSO384G0095 Papaver somniferum HOM05D002214 ORTHO05D005113 5.3e-51 204.9 194 56.7
PSO384G2456 Papaver somniferum HOM05D002214 ORTHO05D005113 7.6e-50 201.1 118 83.9
PSO384G5131 Papaver somniferum HOM05D002214 ORTHO05D005113 1.1e-40 170.6 168 56.5
PSO339G1526 Papaver somniferum HOM05D002214 ORTHO05D005113 3.3e-37 159.1 167 52.7
PSO384G1143 Papaver somniferum HOM05D002214 ORTHO05D005113 3.3e-37 159.1 167 52.7
RcHm_v2.0_Chr1g0318401 Rosa chinensis HOM05D002214 ORTHO05D005113 4.4e-37 158.7 167 53.9
Eucgr.J01208 Eucalyptus grandis HOM05D002214 ORTHO05D005113 7.4e-37 157.9 161 55.3
ClCG09G004420 Citrullus lanatus HOM05D002214 ORTHO05D005113 9.7e-37 157.5 167 52.7
MELO3C023584.2 Cucumis melo HOM05D002214 ORTHO05D005113 9.7e-37 157.5 167 52.7
CsaV3_7G030720 Cucumis sativus L. HOM05D002214 ORTHO05D005113 9.7e-37 157.5 167 52.7
Sp6g30240 Schrenkiella parvula HOM05D002214 ORTHO05D005113 9.7e-37 157.5 167 53.3
Ciclev10032739m.g Citrus clementina HOM05D002214 ORTHO05D005113 1.3e-36 157.1 167 52.7
THA.LOC104809846 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 1.3e-36 157.1 167 52.7
Cpa.g.sc125.49 Carica papaya HOM05D002214 ORTHO05D005113 1.7e-36 156.8 164 53.7
PGR031G1630 Punica granatum HOM05D002214 ORTHO05D005113 2.8e-36 156.0 162 54.3
Cc02_g28810 Coffea canephora HOM05D002214 ORTHO05D005113 3.7e-36 155.6 164 53.0
MSTRG.17006 Avicennia marina HOM05D002214 ORTHO05D005113 6.3e-36 154.8 164 52.4
Psat5g212520 Pisum sativum HOM05D002214 ORTHO05D005113 6.3e-36 154.8 168 53.0
CiPaw.13G008000 Carya illinoinensis HOM05D002214 ORTHO05D005113 8.2e-36 154.5 164 53.0
AL6G24400 Arabidopsis lyrata HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
AT5G13780 Arabidopsis thaliana HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
BcaNung04185 Brassica carinata HOM05D002214 ORTHO05D005113 1.1e-35 154.1 164 53.0
C02p06430 Brassica napus HOM05D002214 ORTHO05D005113 1.1e-35 154.1 164 53.0
BolC2t06589H Brassica oleracea HOM05D002214 ORTHO05D005113 1.1e-35 154.1 164 53.0
Carub.0006s1196 Capsella rubella HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
CARHR199660 Cardamine hirsuta HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
Thhalv10014756m.g Eutrema salsugineum HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
FvH4_7g01790 Fragaria vesca HOM05D002214 ORTHO05D005113 1.1e-35 154.1 167 51.5
FAN03G0770 Fragaria x ananassa HOM05D002214 ORTHO05D005113 1.1e-35 154.1 167 51.5
FAN10G3956 Fragaria x ananassa HOM05D002214 ORTHO05D005113 1.1e-35 154.1 167 51.5
Lalb_Chr04g0263831 Lupinus albus HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.7
MBI19_g12816_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
SGA_v2.0_scaffold119G32765 Striga asiatica HOM05D002214 ORTHO05D005113 1.1e-35 154.1 167 52.7
THA.LOC104819106 Tarenaya hassleriana HOM05D002214 ORTHO05D005113 1.1e-35 154.1 161 54.0
Aa31sc919G10 Aethionema arabicum HOM05D002214 ORTHO05D005113 1.4e-35 153.7 162 53.7
Ca_27724_v3 Cicer arietinum L. HOM05D002214 ORTHO05D005113 1.4e-35 153.7 167 52.7
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 1.4e-35 153.7 164 52.4
QL04p010049 Quercus lobata HOM05D002214 ORTHO05D005113 1.4e-35 153.7 161 53.4
Thecc.01G406300 Theobroma cacao HOM05D002214 ORTHO05D005113 1.4e-35 153.7 162 53.7
TPR.G14549 Trifolium pratense HOM05D002214 ORTHO05D005113 1.4e-35 153.7 161 54.7
unitig_37.g12366 Utricularia gibba HOM05D002214 ORTHO05D005113 1.4e-35 153.7 161 53.4
CSS0031731 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D005113 1.8e-35 153.3 164 53.0
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.8e-35 153.3 162 53.1
Atru.chr11.2514 Acer truncatum HOM05D002214 ORTHO05D005113 2.4e-35 152.9 164 51.8
Lj3g0001707 Lotus japonicus HOM05D002214 ORTHO05D005113 2.4e-35 152.9 161 54.0
Glyma.04G142300 Glycine max HOM05D002214 ORTHO05D005113 3.1e-35 152.5 161 53.4
Glyma.11G159648 Glycine max HOM05D002214 ORTHO05D005113 3.1e-35 152.5 161 53.4
Phvul.011G183200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 3.1e-35 152.5 161 53.4
Potri.009G056600 Populus trichocarpa HOM05D002214 ORTHO05D005113 3.1e-35 152.5 162 53.1
Sabra09G0041400 Salix brachista HOM05D002214 ORTHO05D005113 3.1e-35 152.5 162 53.7
Duzib133G1108 Durio zibethinus HOM05D002214 ORTHO05D005113 4.1e-35 152.1 161 53.4
FAN01G2033 Fragaria x ananassa HOM05D002214 ORTHO05D005113 4.1e-35 152.1 167 50.9
MD07G1023300 Malus domestica HOM05D002214 ORTHO05D005113 5.3e-35 151.8 161 52.8
Medtr3g034200 Medicago truncatula HOM05D002214 ORTHO05D005113 5.3e-35 151.8 160 54.4
Prupe.2G024200 Prunus persica HOM05D002214 ORTHO05D005113 5.3e-35 151.8 161 52.8
TWI53G0951 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 5.3e-35 151.8 161 53.4
TWI53G1910 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 5.3e-35 151.8 161 53.4
BcaNung04183 Brassica carinata HOM05D002214 ORTHO05D005113 6.9e-35 151.4 161 53.4
Sabra16G0160600 Salix brachista HOM05D002214 ORTHO05D005113 6.9e-35 151.4 162 52.5
SalBow6G0878 Salvia bowleyana HOM05D002214 ORTHO05D005113 6.9e-35 151.4 161 52.8
VMungo1127G0768 Vigna mungo HOM05D002214 ORTHO05D005113 6.9e-35 151.4 161 52.8
CANSAT80G0460 Cannabis sativa HOM05D002214 ORTHO05D005113 9.1e-35 151.0 161 52.2
VMungo1080G0077 Vigna mungo HOM05D002214 ORTHO05D005113 9.1e-35 151.0 161 52.8
Cfa010811 Carpinus fangiana HOM05D002214 ORTHO05D005113 1.2e-34 150.6 160 53.1
Haze_03145 Corylus avellana HOM05D002214 ORTHO05D005113 1.2e-34 150.6 160 53.1
Haze_03148 Corylus avellana HOM05D002214 ORTHO05D005113 1.2e-34 150.6 160 53.1
DCAR_003226 Daucus carota HOM05D002214 ORTHO05D005113 1.2e-34 150.6 168 52.4
Gohir.A11G135400 Gossypium hirsutum HOM05D002214 ORTHO05D005113 1.2e-34 150.6 160 53.1
Manes.07G010700 Manihot esculenta HOM05D002214 ORTHO05D005113 1.2e-34 150.6 161 52.8
Manes.10G136000 Manihot esculenta HOM05D002214 ORTHO05D005113 1.2e-34 150.6 161 52.8
BcaC04g19081 Brassica carinata HOM05D002214 ORTHO05D005113 1.5e-34 150.2 167 50.9
BolC9t59169H Brassica oleracea HOM05D002214 ORTHO05D005113 1.5e-34 150.2 167 50.9
CiPaw.14G003300 Carya illinoinensis HOM05D002214 ORTHO05D005113 1.5e-34 150.2 164 50.6
Rhsim01G0125000 Rhododendron simsii HOM05D002214 ORTHO05D005113 1.5e-34 150.2 161 52.8
Sed0009169 Sechium edule HOM05D002214 ORTHO05D005113 1.5e-34 150.2 167 50.9
Sc11g0009030 Simmondsia chinensis HOM05D002214 ORTHO05D005113 2.6e-34 149.4 167 50.9
TAR623G1010 Trochodendron aralioides HOM05D002214 ORTHO05D005113 2.6e-34 149.4 161 52.2
HanXRQChr08g0226841 Helianthus annuus HOM05D002214 ORTHO05D005113 3.4e-34 149.1 160 52.5
MD02G1300400 Malus domestica HOM05D002214 ORTHO05D005113 3.4e-34 149.1 161 52.2
Migut.B01260 Erythranthe guttata HOM05D002214 ORTHO05D005113 4.5e-34 148.7 161 52.2
Nn2g15193 Nelumbo nucifera HOM05D002214 ORTHO05D005113 4.5e-34 148.7 161 52.2
Sed0022614 Sechium edule HOM05D002214 ORTHO05D005113 5.9e-34 148.3 167 49.7
TWI09G0624 Tripterygium wilfordii HOM05D002214 ORTHO05D005113 5.9e-34 148.3 161 53.4
Dinv43403 Davidia involucrata HOM05D002214 ORTHO05D005113 7.7e-34 147.9 159 52.8
Nitab4.5_0001244g0050 Nicotiana tabacum HOM05D002214 ORTHO05D005113 7.7e-34 147.9 161 51.6
Duzib138G1825 Durio zibethinus HOM05D002214 ORTHO05D005113 1.0e-33 147.5 162 51.2
Gohir.D11G141700 Gossypium hirsutum HOM05D002214 ORTHO05D005113 1.0e-33 147.5 160 52.5
Gorai.007G152100 Gossypium raimondii HOM05D002214 ORTHO05D005113 1.0e-33 147.5 160 52.5
Phvul.005G035200 Phaseolus vulgaris HOM05D002214 ORTHO05D005113 1.0e-33 147.5 161 51.6
Potri.001G261800 Populus trichocarpa HOM05D002214 ORTHO05D005113 1.3e-33 147.1 162 51.2
Aqoxy2G02029 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 1.7e-33 146.7 161 50.3
BcaC04g24254 Brassica carinata HOM05D002214 ORTHO05D005113 1.7e-33 146.7 161 51.6
HanXRQChr03g0082771 Helianthus annuus HOM05D002214 ORTHO05D005113 1.7e-33 146.7 160 51.9
Nitab4.5_0008942g0030 Nicotiana tabacum HOM05D002214 ORTHO05D005113 1.7e-33 146.7 161 51.6
TAR633G1565 Trochodendron aralioides HOM05D002214 ORTHO05D005113 2.2e-33 146.4 161 51.6
CAN.G909.3 Capsicum annuum HOM05D002214 ORTHO05D005113 2.9e-33 146.0 161 50.3
Solyc01g087900.3 Solanum lycopersicum HOM05D002214 ORTHO05D005113 2.9e-33 146.0 161 50.3
Sopen01g034830 Solanum pennellii HOM05D002214 ORTHO05D005113 2.9e-33 146.0 161 50.3
PGSC0003DMG400006777 Solanum tuberosum HOM05D002214 ORTHO05D005113 2.9e-33 146.0 161 50.3
Ah.10g038600 Amaranthus hybridus HOM05D002214 ORTHO05D005113 3.8e-33 145.6 160 51.2
Aqoxy1G00322 Aquilegia oxysepala HOM05D002214 ORTHO05D005113 3.8e-33 145.6 161 49.7
Hma1.2p1_2740F.1_g327740 Hydrangea macrophylla HOM05D002214 ORTHO05D005113 3.8e-33 145.6 161 50.9
Lsat_1_v5_gn_6_74341 Lactuca sativa HOM05D002214 ORTHO05D005113 3.8e-33 145.6 160 51.2
Nitab4.5_0000087g0120 Nicotiana tabacum HOM05D002214 ORTHO05D005113 3.8e-33 145.6 161 51.6
Nitab4.5_0001676g0100 Nicotiana tabacum HOM05D002214 ORTHO05D005113 3.8e-33 145.6 161 51.6
Oeu047606.1 Olea europaea HOM05D002214 ORTHO05D005113 3.8e-33 145.6 161 51.6
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 5.0e-33 145.2 160 51.9
ATR0322G021 Amborella trichopoda HOM05D002214 ORTHO05D005113 6.5e-33 144.8 160 50.6
Peaxi162Scf01270g00125 Petunia axillaris HOM05D002214 ORTHO05D005113 6.5e-33 144.8 161 50.9
PSO339G1308 Papaver somniferum HOM05D002214 ORTHO05D005113 8.5e-33 144.4 180 50.0
EL10Ac2g04370 Beta vulgaris HOM05D002214 ORTHO05D005113 1.1e-32 144.1 160 50.6
CDE08G0672 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 1.1e-32 144.1 160 50.6
ECA233G5526 Erigeron canadensis HOM05D002214 ORTHO05D005113 1.1e-32 144.1 160 50.6
Lsat_1_v5_gn_6_17421 Lactuca sativa HOM05D002214 ORTHO05D005113 1.1e-32 144.1 160 50.6
MD02G1300500 Malus domestica HOM05D002214 ORTHO05D005113 1.1e-32 144.1 161 50.9
Peaxi162Scf00071g01032 Petunia axillaris HOM05D002214 ORTHO05D005113 1.1e-32 144.1 161 50.9
SEGI_02460 Sequoiadendron giganteum HOM05D002214 ORTHO05D005113 2.5e-32 142.9 161 49.7
arahy.Tifrunner.gnm1.ann1.M3J26F Arachis hypogaea HOM05D002214 ORTHO05D005113 5.5e-32 141.7 190 46.3
PSO384G2386 Papaver somniferum HOM05D002214 ORTHO05D005113 5.5e-32 141.7 145 53.8
CBR_g48990 Chara braunii HOM05D002214 ORTHO05D005113 9.4e-32 141.0 161 49.1
SGA_v2.0_scaffold4G02481 Striga asiatica HOM05D002214 ORTHO05D005113 1.6e-31 140.2 178 47.8
Migut.N01799 Erythranthe guttata HOM05D002214 ORTHO05D005113 3.6e-31 139.0 167 47.3
vmacro17359 Vaccinium macrocarpon HOM05D002214 ORTHO05D005113 3.6e-31 139.0 181 47.0
AagrBONN_evm.TU.Sc2ySwM_368.2201 Anthoceros agrestis HOM05D002214 ORTHO05D005113 4.7e-31 138.7 160 48.1
Pp3c7_5970 Physcomitrium patens HOM05D002214 ORTHO05D005113 6.1e-31 138.3 164 48.2
arahy.Tifrunner.gnm1.ann1.0NW2H0 Arachis hypogaea HOM05D002214 ORTHO05D005113 1.4e-30 137.1 203 43.3
Sc11g0003930 Simmondsia chinensis HOM05D002214 ORTHO05D005113 2.3e-30 136.3 167 47.3
DCAR_022372 Daucus carota HOM05D002214 ORTHO05D005113 8.8e-30 134.4 160 49.4
Lj9A641T66 Lonicera japonica HOM05D002214 ORTHO05D005113 1.1e-29 134.0 131 56.5
PSO384G3036 Papaver somniferum HOM05D002214 ORTHO05D005113 1.1e-29 134.0 91 71.4
SMO137G0156 Selaginella moellendorffii HOM05D002214 ORTHO05D005113 4.4e-29 132.1 154 47.4
Lj7C576T11 Lonicera japonica HOM05D002214 ORTHO05D005113 5.7e-29 131.7 174 47.1
Oeu014596.2 Olea europaea HOM05D002214 ORTHO05D005113 7.4e-29 131.3 205 41.5
Os04g0635800 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D005113 7.4e-29 131.3 162 48.8
Zm00001eb431690 Zea mays HOM05D002214 ORTHO05D005113 1.7e-28 130.2 162 47.5
Zm00001eb069290 Zea mays HOM05D002214 ORTHO05D005113 2.8e-28 129.4 162 47.5
Cre08.g364450 Chlamydomonas reinhardtii HOM05D002214 ORTHO05D005113 4.8e-28 128.6 155 45.8
Mapoly0014s0153 Marchantia polymorpha HOM05D002214 ORTHO05D005113 1.4e-27 127.1 172 45.3
PRCOL_00004224 Prasinoderma coloniale HOM05D002214 ORTHO05D005113 1.8e-27 126.7 170 44.1
MCO11G341 Micromonas commoda HOM05D002214 ORTHO05D005113 9.1e-27 124.4 153 45.8
MD07G1016300 Malus domestica HOM05D002214 ORTHO05D005113 1.2e-26 124.0 139 50.4
MD07G1016800 Malus domestica HOM05D002214 ORTHO05D005113 1.2e-26 124.0 139 50.4
PSO782G4346 Papaver somniferum HOM05D002214 ORTHO05D304534 5.0e-25 118.6 165 43.0
CDE02G0928 Ceratophyllum demersum HOM05D002214 ORTHO05D005113 1.6e-23 113.6 111 55.0
GSVIVG01032214001 Vitis vinifera HOM05D002214 ORTHO05D005113 3.0e-22 109.4 92 60.9
A02p02180 Brassica napus HOM05D002214 ORTHO05D005113 2.6e-21 106.3 97 57.7
Cfa022421 Carpinus fangiana HOM05D002214 ORTHO05D005113 3.3e-21 105.9 166 42.2
Haze_26658 Corylus avellana HOM05D002214 ORTHO05D005113 4.4e-21 105.5 161 38.5
HPP92_012859 Vanilla planifolia HOM05D002214 ORTHO05D005113 6.3e-20 101.7 147 44.2
BcaC08g43425 Brassica carinata HOM05D002214 ORTHO05D005113 2.0e-18 96.7 103 54.4
Pp3c18_3810 Physcomitrium patens HOM05D002214 ORTHO05D005113 2.5e-16 89.7 134 41.0
A10p24570 Brassica napus HOM05D002214 ORTHO05D005113 5.5e-16 88.6 106 48.1
C09p63320 Brassica napus HOM05D002214 ORTHO05D005113 5.5e-16 88.6 106 48.1
DCAR_022374 Daucus carota HOM05D002214 ORTHO05D005113 1.8e-14 83.6 117 44.4
CBR_g41307 Chara braunii HOM05D005702 ORTHO05D007080 3.4e-13 79.3 157 33.8
arahy.Tifrunner.gnm1.ann1.13N2B5 Arachis hypogaea HOM05D002214 ORTHO05D005113 4.4e-13 79.0 73 57.5
MCO07G257 Micromonas commoda HOM05D005702 ORTHO05D007080 4.8e-12 75.5 125 34.4
Mapoly0054s0004 Marchantia polymorpha HOM05D005702 ORTHO05D007080 8.3e-12 74.7 124 36.3
Lalb_Chr02g0142721 Lupinus albus HOM05D005702 ORTHO05D007080 9.1e-11 71.2 124 36.3
THA.LOC104825996 Tarenaya hassleriana HOM05D005702 ORTHO05D007080 3.5e-10 69.3 124 36.3
FAN27G1453 Fragaria x ananassa HOM05D005702 ORTHO05D007080 7.7e-10 68.2 124 36.3
PGSC0003DMG400026070 Solanum tuberosum HOM05D005702 ORTHO05D007080 1.3e-09 67.4 124 34.7
Nitab4.5_0001082g0090 Nicotiana tabacum HOM05D005702 ORTHO05D007080 3.8e-09 65.9 137 34.3
Medtr3g030055 Medicago truncatula HOM05D002214 ORTHO05D005113 5.0e-09 65.5 120 38.3
Solyc06g065230.3 Solanum lycopersicum HOM05D005702 ORTHO05D007080 1.1e-08 64.3 124 33.9
Sopen06g023720 Solanum pennellii HOM05D005702 ORTHO05D007080 1.1e-08 64.3 124 33.9
Lalb_Chr01g0015281 Lupinus albus HOM05D006339 ORTHO05D007892 3.2e-08 62.8 139 29.5
FvH4_6g54330 Fragaria vesca HOM05D006339 ORTHO05D007892 9.5e-08 61.2 128 30.5
arahy.Tifrunner.gnm1.ann1.Y5766G Arachis hypogaea HOM05D002214 ORTHO05D009715 1.6e-07 60.5 59 50.8
FAN05G1930 Fragaria x ananassa HOM05D006339 ORTHO05D007892 1.6e-07 60.5 128 30.5
RcHm_v2.0_Chr2g0176551 Rosa chinensis HOM05D006339 ORTHO05D007892 1.6e-07 60.5 128 30.5
Atru.chr6.2696 Acer truncatum HOM05D006339 ORTHO05D007892 2.1e-07 60.1 128 30.5
arahy.Tifrunner.gnm1.ann1.EWEG8C Arachis hypogaea HOM05D002214 ORTHO05D005113 2.1e-07 60.1 60 51.7
arahy.Tifrunner.gnm1.ann1.F9QUKJ Arachis hypogaea HOM05D002214 ORTHO05D005113 2.8e-07 59.7 54 53.7
EL10Ac7g16708 Beta vulgaris HOM05D005702 ORTHO05D007080 3.6e-07 59.3 136 31.6
Pp3c18_17900 Physcomitrium patens HOM05D006339 ORTHO05D007892 3.6e-07 59.3 142 30.3
PSO017G1553 Papaver somniferum HOM05D006339 ORTHO05D007892 6.1e-07 58.5 128 28.9
PSO478G5314 Papaver somniferum HOM05D006339 ORTHO05D007892 6.1e-07 58.5 128 28.9
MSTRG.12560 Avicennia marina HOM05D005702 ORTHO05D007080 1.0e-06 57.8 94 38.3
Pp3c21_5060 Physcomitrium patens HOM05D006339 ORTHO05D007892 1.4e-06 57.4 142 31.0
SMO356G0009 Selaginella moellendorffii HOM05D004398 ORTHO05D005268 6.8e-06 55.1 100 33.0


User provided reference genes

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