Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 5.4e-62 241.1 151 100.0
PSO339G0123 Papaver somniferum HOM05D008121 ORTHO05D009878 1.8e-52 209.5 177 80.2
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 1.3e-10 70.5 70 54.3
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 1.2e-08 63.9 52 71.2
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 3.5e-08 62.4 66 59.1
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 5.9e-08 61.6 66 60.6
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 1.0e-07 60.8 48 72.9
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 1.3e-07 60.5 80 51.2
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 1.7e-07 60.1 48 64.6
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 1.7e-07 60.1 48 77.1
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 1.7e-07 60.1 48 72.9
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 1.7e-07 60.1 48 72.9
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 2.2e-07 59.7 70 54.3
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 2.2e-07 59.7 80 48.8
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 2.2e-07 59.7 78 52.6
Ciclev10023121m.g Citrus clementina HOM05D008121 ORTHO05D009878 2.9e-07 59.3 52 69.2
Ciclev10024026m.g Citrus clementina HOM05D008121 ORTHO05D009878 2.9e-07 59.3 52 69.2
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 5.0e-07 58.5 65 56.9
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 5.0e-07 58.5 79 55.7
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 5.0e-07 58.5 81 54.3
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 6.5e-07 58.2 48 68.8
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 8.5e-07 57.8 56 62.5
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 1.1e-06 57.4 79 46.8
TPR.G37567 Trifolium pratense HOM05D008121 ORTHO05D009878 1.1e-06 57.4 48 66.7
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 1.5e-06 57.0 55 60.0
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.5e-06 57.0 78 51.3
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 1.5e-06 57.0 66 53.0
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 1.9e-06 56.6 52 69.2
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.9e-06 56.6 48 66.7
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.9e-06 56.6 48 66.7
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 1.9e-06 56.6 48 72.9
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 2.5e-06 56.2 46 69.6
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 2.5e-06 56.2 78 50.0
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 3.2e-06 55.8 67 50.7
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 3.2e-06 55.8 67 53.7
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 4.2e-06 55.5 57 61.4
Nn4g22451 Nelumbo nucifera HOM05D008121 ORTHO05D009878 4.2e-06 55.5 60 60.0
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 5.5e-06 55.1 69 53.6
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 5.5e-06 55.1 77 49.4
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 7.2e-06 54.7 47 63.8
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 7.2e-06 54.7 70 48.6
Medtr4g104040 Medicago truncatula HOM05D008121 ORTHO05D009878 7.2e-06 54.7 57 59.6
Psat4g064880 Pisum sativum HOM05D008121 ORTHO05D009878 7.2e-06 54.7 48 66.7


User provided reference genes

Program Settings