Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 5.1e-285 983.8 519 100.0
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 4.3e-268 927.5 519 95.4
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.3e-74 283.5 547 40.6
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 8.9e-72 275.4 525 42.9
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 6.6e-67 259.2 507 42.2
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 2.8e-65 253.8 509 41.7
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 7.6e-63 245.7 524 38.7
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 7.6e-63 245.7 535 38.1
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 9.9e-63 245.4 524 38.2
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 2.2e-62 244.2 499 40.3
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 1.1e-61 241.9 535 39.3
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 3.3e-58 230.3 537 38.4
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 5.6e-58 229.6 605 37.4
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 5.6e-58 229.6 546 38.6
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.3e-57 228.4 505 38.6
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 4.8e-57 226.5 527 38.0
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 6.2e-57 226.1 551 37.2
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 8.1e-57 225.7 530 38.1
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 6.9e-56 222.6 530 37.7
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 7.6e-55 219.2 531 37.7
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 4.9e-54 216.5 521 37.4
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 4.2e-53 213.4 519 37.0
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 5.5e-53 213.0 531 37.5
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 2.1e-52 211.1 526 39.7
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 2.7e-52 210.7 533 37.0
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 2.3e-51 207.6 508 39.2
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 8.7e-51 205.7 534 36.1
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.1e-50 205.3 550 35.6
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.1e-50 205.3 534 35.6
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 2.5e-50 204.1 550 36.4
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 7.4e-50 202.6 534 37.5
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 7.4e-50 202.6 528 37.5
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 1.6e-49 201.4 533 36.2
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.6e-49 201.4 523 36.1
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 2.1e-49 201.1 566 34.8
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 2.1e-49 201.1 512 37.5
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 8.2e-49 199.1 551 35.8
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 8.2e-49 199.1 527 35.3
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 1.1e-48 198.7 542 36.9
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 1.8e-48 198.0 549 35.0
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 1.8e-48 198.0 556 35.6
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.8e-48 198.0 476 39.1
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 2.4e-48 197.6 556 36.3
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 2.4e-48 197.6 543 36.1
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 4.0e-48 196.8 517 36.8
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 6.9e-48 196.1 556 36.2
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 6.9e-48 196.1 530 36.4
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 9.0e-48 195.7 519 35.3
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 1.2e-47 195.3 581 33.7
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.5e-47 194.9 540 35.2
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.6e-47 194.1 536 36.0
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 2.6e-47 194.1 540 36.9
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 2.6e-47 194.1 532 34.6
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.4e-47 193.7 525 36.4
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 1.0e-46 192.2 530 35.8
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 1.7e-46 191.4 536 37.3
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 1.9e-45 188.0 544 34.7
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 3.2e-45 187.2 537 35.9
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 7.1e-45 186.0 543 35.2
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.2e-44 185.3 526 34.8
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.6e-44 183.3 518 34.9
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.6e-44 183.3 533 35.5
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.8e-43 181.4 517 34.8
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 1.3e-41 175.3 525 35.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 6.3e-41 172.9 553 35.1
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.4e-40 171.8 507 34.5
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 2.4e-40 171.0 526 33.1
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 3.1e-40 170.6 506 34.6
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.2e-39 168.7 422 37.0
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 7.6e-39 166.0 589 32.4
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.3e-38 165.2 540 33.0
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 1.3e-38 165.2 520 33.7
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 1.7e-38 164.9 507 34.1
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 2.9e-38 164.1 530 33.6
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 8.5e-38 162.5 475 33.9
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.9e-37 161.4 531 31.6
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 1.9e-37 161.4 477 35.6
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 7.2e-37 159.5 544 32.5
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 1.6e-36 158.3 529 31.8
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 2.7e-36 157.5 458 35.6
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 3.6e-36 157.1 511 33.7
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 7.9e-36 156.0 488 33.0
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 1.8e-35 154.8 484 33.1
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 2.3e-35 154.5 537 31.5
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 8.7e-35 152.5 295 41.4
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.1e-34 152.1 507 32.0
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 7.4e-34 149.4 529 31.9
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 9.7e-34 149.1 507 33.7
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.1e-32 145.6 568 30.5
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 6.9e-32 142.9 528 30.9
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 2.0e-31 141.4 501 32.3
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 5.0e-30 136.7 527 30.2
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 6.5e-30 136.3 667 28.5
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 8.5e-30 136.0 537 29.6
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 3.2e-29 134.0 541 29.9
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 1.0e-27 129.0 544 28.9
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 2.3e-27 127.9 483 31.1
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 3.0e-27 127.5 543 29.7
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 1.1e-26 125.6 293 36.9
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 7.4e-26 122.9 548 28.6
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 2.8e-25 120.9 526 27.6
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 1.1e-24 119.0 547 29.3
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 1.8e-24 118.2 526 27.8
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 6.9e-24 116.3 532 26.9
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 6.9e-24 116.3 532 26.9
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 8.5e-22 109.4 523 30.2
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 8.5e-22 109.4 534 26.6
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 5.5e-21 106.7 480 29.4
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 5.5e-21 106.7 520 26.5
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 3.6e-20 104.0 347 31.1
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.8e-19 101.7 535 26.7
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 3.0e-19 100.9 535 26.7
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 2.0e-18 98.2 534 26.0
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 2.6e-18 97.8 539 26.3
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 7.7e-15 86.3 522 25.9
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 7.7e-15 86.3 187 39.0
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 2.9e-14 84.3 436 29.4
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 3.8e-14 84.0 544 28.5
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 5.0e-14 83.6 281 32.4
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.9e-13 81.6 516 25.6
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 2.0e-10 71.6 361 26.3
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 2.8e-09 67.8 85 49.4
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 3.8e-06 57.4 423 28.4


User provided reference genes

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