Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 2.2e-134 482.3 234 100.0
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 7.2e-130 467.2 234 97.0
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 3.8e-70 268.9 176 74.4
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 4.9e-70 268.5 181 74.0
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.4e-69 266.9 192 70.8
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 9.3e-69 264.2 193 70.5
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 2.1e-68 263.1 216 63.4
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 2.1e-68 263.1 192 70.3
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 2.7e-68 262.7 185 70.8
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 4.6e-68 261.9 187 71.7
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.3e-67 259.6 202 62.9
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 3.0e-67 259.2 209 63.2
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 5.1e-67 258.5 207 63.3
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 8.7e-67 257.7 180 70.0
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.1e-66 257.3 211 62.6
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 1.5e-66 256.9 179 71.5
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 7.4e-66 254.6 180 70.6
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 9.6e-66 254.2 209 61.7
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 9.6e-66 254.2 176 72.2
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 1.3e-65 253.8 231 60.2
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 1.3e-65 253.8 224 59.8
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 1.6e-65 253.4 182 70.9
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 2.1e-65 253.1 180 70.0
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 4.8e-65 251.9 177 68.4
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.8e-65 251.9 182 70.3
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 8.1e-65 251.1 202 59.4
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.1e-64 250.8 176 68.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 1.4e-64 250.4 172 71.5
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 1.8e-64 250.0 185 67.6
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 2.4e-64 249.6 206 61.7
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 2.4e-64 249.6 184 69.0
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.4e-64 249.6 182 69.2
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 3.1e-64 249.2 182 67.0
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 3.1e-64 249.2 182 67.6
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 3.1e-64 249.2 175 72.0
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 4.0e-64 248.8 180 68.9
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 6.9e-64 248.1 185 66.5
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 6.9e-64 248.1 182 66.5
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 9.0e-64 247.7 175 68.6
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 9.0e-64 247.7 180 67.2
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 2.6e-63 246.1 177 68.4
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 4.5e-63 245.4 185 66.5
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 1.3e-62 243.8 180 70.0
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 1.3e-62 243.8 180 68.3
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 1.7e-62 243.4 185 65.9
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 4.9e-62 241.9 174 69.0
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 4.9e-62 241.9 177 67.2
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 6.5e-62 241.5 179 67.0
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 8.4e-62 241.1 189 64.0
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 8.4e-62 241.1 175 66.9
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 8.4e-62 241.1 185 65.9
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.4e-61 240.4 221 56.6
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.4e-61 240.4 221 56.6
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 1.4e-61 240.4 176 68.2
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 4.2e-61 238.8 180 67.2
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 5.5e-61 238.4 181 63.5
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 7.1e-61 238.0 180 67.2
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 7.1e-61 238.0 180 67.2
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 7.1e-61 238.0 180 67.2
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 9.3e-61 237.7 182 63.2
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 9.3e-61 237.7 213 60.1
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 1.6e-60 236.9 190 64.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.7e-60 236.1 186 62.4
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 3.5e-60 235.7 204 57.8
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 6.0e-60 235.0 175 66.9
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 7.9e-60 234.6 186 64.0
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 7.9e-60 234.6 173 67.1
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 3.9e-59 232.3 170 68.2
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 5.1e-59 231.9 178 66.9
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 5.1e-59 231.9 178 66.9
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 6.7e-59 231.5 173 67.1
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 3.3e-58 229.2 179 63.1
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 4.3e-58 228.8 172 66.3
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 7.4e-58 228.0 172 66.9
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 1.3e-57 227.3 169 66.9
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.3e-57 227.3 179 64.2
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 2.1e-57 226.5 172 65.7
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 3.7e-57 225.7 172 65.7
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 3.7e-57 225.7 172 66.3
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 6.3e-57 224.9 201 58.7
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 1.4e-56 223.8 168 66.7
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 4.1e-56 222.2 196 59.7
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 2.6e-55 219.5 178 61.8
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 1.1e-53 214.2 159 67.3
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 4.2e-53 212.2 194 59.8
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.3e-51 207.2 143 69.2
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 2.3e-51 206.5 177 61.0
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 6.7e-51 204.9 177 59.9
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.5e-50 203.8 176 60.2
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 4.3e-50 202.2 183 59.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.8e-48 196.8 210 55.2
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 9.1e-48 194.5 149 67.8
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 9.1e-48 194.5 152 62.5
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 7.7e-47 191.4 171 58.5
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 1.7e-46 190.3 190 54.7
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 3.8e-46 189.1 183 57.9
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 9.4e-45 184.5 164 60.4
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.6e-44 183.7 171 52.6
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 2.7e-44 183.0 169 53.8
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 6.7e-43 178.3 133 66.9
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 1.4e-40 170.6 182 48.9
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 5.3e-40 168.7 130 70.0
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.3e-38 164.1 191 50.3
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 3.9e-35 152.5 164 54.9
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.1e-34 151.0 168 46.4
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.4e-34 148.3 185 45.9
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 1.7e-33 147.1 179 45.8
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.9e-29 133.7 109 61.5
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 4.7e-28 129.0 121 57.0
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 6.1e-28 128.6 116 62.1
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 4.0e-27 125.9 93 64.5
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.6e-26 123.2 99 57.6
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.3e-25 120.9 140 49.3
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.7e-25 120.6 88 67.0
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 2.8e-25 119.8 107 59.8
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 3.7e-25 119.4 128 49.2
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.4e-24 116.7 93 59.1
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 4.2e-21 105.9 114 49.1
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 9.4e-21 104.8 71 78.9
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 2.3e-19 100.1 115 54.8
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.5e-15 86.3 63 61.9
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 6.5e-14 82.0 125 42.4
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 8.6e-14 81.6 115 47.8
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 3.2e-13 79.7 115 46.1
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 5.5e-13 79.0 238 25.2
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 3.0e-11 73.2 55 70.9
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 2.2e-09 67.0 168 33.3
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-08 63.9 58 63.8
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 2.0e-07 60.5 42 59.5


User provided reference genes

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