Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 5.6e-231 803.9 404 100.0
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 1.1e-213 746.5 384 97.9
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 5.9e-180 634.4 407 77.1
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 2.1e-177 625.9 407 77.9
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 2.7e-177 625.5 407 76.9
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 4.7e-177 624.8 402 77.1
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 3.4e-175 618.6 407 76.4
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 2.8e-174 615.5 406 75.4
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 4.8e-174 614.8 395 76.7
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 1.4e-173 613.2 407 76.2
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.4e-173 613.2 407 75.4
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 7.0e-173 610.9 430 72.6
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 1.6e-172 609.8 407 74.9
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 2.0e-172 609.4 405 73.6
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.5e-172 608.6 375 80.0
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 4.5e-172 608.2 375 79.7
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 2.9e-171 605.5 405 74.6
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 2.5e-170 602.4 406 75.1
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 5.5e-170 601.3 338 84.0
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 7.2e-170 600.9 345 83.2
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 7.2e-170 600.9 343 84.8
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 9.5e-170 600.5 409 74.1
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.2e-169 600.1 345 82.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.8e-169 599.0 377 78.5
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 2.8e-169 599.0 338 84.3
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.6e-169 598.6 398 75.6
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 3.6e-169 598.6 405 73.6
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 4.7e-169 598.2 350 82.3
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 4.7e-169 598.2 407 72.5
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.0e-168 597.0 350 82.0
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.0e-168 597.0 338 84.6
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.4e-168 596.7 404 74.5
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 1.8e-168 596.3 371 78.2
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 1.8e-168 596.3 355 82.3
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 1.8e-168 596.3 374 79.1
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 2.3e-168 595.9 408 74.5
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 4.0e-168 595.1 374 78.9
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 6.8e-168 594.3 407 73.2
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 8.8e-168 594.0 404 74.0
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.8e-168 594.0 335 84.2
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 3.4e-167 592.0 335 84.2
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 4.4e-167 591.7 351 81.8
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 7.5e-167 590.9 382 77.5
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 9.8e-167 590.5 335 83.6
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 9.8e-167 590.5 409 72.4
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 1.3e-166 590.1 335 83.9
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 1.7e-166 589.7 374 77.8
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 2.2e-166 589.3 405 73.8
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.8e-166 589.0 345 81.7
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 4.9e-166 588.2 408 72.5
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 1.1e-165 587.0 405 72.8
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.1e-165 587.0 338 81.4
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 1.4e-165 586.6 372 78.2
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 1.8e-165 586.3 363 78.5
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.4e-165 585.9 335 83.9
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 4.1e-165 585.1 341 82.1
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 2.7e-164 582.4 345 80.9
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 3.5e-164 582.0 374 77.0
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 4.5e-164 581.6 399 73.4
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 5.9e-164 581.3 367 78.7
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 7.8e-164 580.9 400 73.5
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 1.0e-163 580.5 354 80.2
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 1.0e-163 580.5 327 84.7
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.3e-163 580.1 375 76.3
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.7e-163 579.7 365 77.8
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 1.7e-163 579.7 338 81.1
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.7e-163 579.7 350 79.4
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 2.9e-163 578.9 368 77.4
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 3.8e-163 578.6 406 71.2
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 3.8e-163 578.6 347 79.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 8.6e-163 577.4 359 77.7
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 1.1e-162 577.0 406 71.2
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 1.5e-162 576.6 356 78.9
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 3.3e-162 575.5 386 75.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 4.3e-162 575.1 347 79.8
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 9.5e-162 573.9 350 78.9
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 9.5e-162 573.9 406 70.4
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 1.6e-161 573.2 350 78.6
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 1.6e-161 573.2 361 77.8
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 2.8e-161 572.4 363 77.4
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 3.6e-161 572.0 461 65.3
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 4.7e-161 571.6 375 75.7
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 1.0e-160 570.5 370 76.8
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.4e-160 570.1 345 79.1
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.8e-160 569.7 332 79.8
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 6.8e-160 567.8 393 73.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 1.2e-159 567.0 371 76.0
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 1.5e-159 566.6 319 84.6
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 2.6e-159 565.8 394 71.6
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 5.7e-159 564.7 345 78.3
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 5.7e-159 564.7 395 72.7
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 2.9e-158 562.4 367 74.1
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 7.0e-157 557.8 338 78.1
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 6.6e-155 551.2 408 69.4
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 8.0e-153 544.3 327 80.7
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.4e-152 543.5 350 75.1
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 1.8e-152 543.1 404 68.1
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 6.8e-152 541.2 327 80.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 3.7e-142 508.8 384 66.4
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.4e-141 505.0 329 72.0
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 4.6e-140 501.9 360 68.1
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 6.0e-140 501.5 329 70.8
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 7.8e-140 501.1 363 68.6
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 5.6e-138 495.0 345 70.1
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 1.2e-137 493.8 403 65.8
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 2.0e-127 459.9 406 62.1
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.9e-125 453.4 375 64.0
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 6.0e-124 448.4 405 60.2
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 4.0e-120 435.6 329 62.3
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.2e-116 424.1 294 72.8
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.1e-114 417.5 387 56.1
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 1.4e-109 400.6 292 70.2
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 1.8e-107 393.7 333 58.0
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 5.1e-107 392.1 292 69.2
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 1.4e-104 384.0 279 70.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.6e-103 379.8 226 78.8
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 1.7e-102 377.1 327 58.7
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 4.8e-97 359.0 375 48.8
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 5.9e-71 272.3 287 46.7
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.5e-66 257.7 168 74.4
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 7.0e-64 248.8 184 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 1.6e-55 221.1 206 57.3
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 5.7e-50 202.6 156 66.0
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 1.8e-48 197.6 131 74.0
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 1.6e-15 88.2 90 51.1
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 1.6e-15 88.2 90 51.1
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 7.8e-15 85.9 55 78.2
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 5.8e-10 69.7 35 82.9


User provided reference genes

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