Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 5.3e-199 697.6 377 100.0
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 5.5e-180 634.4 377 92.3
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 9.6e-116 421.0 377 67.1
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 6.2e-115 418.3 379 66.5
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.1e-111 407.5 364 67.0
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.9e-111 406.8 355 67.3
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 2.1e-110 403.3 371 66.6
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 2.7e-110 402.9 388 64.2
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.0e-109 401.0 376 63.8
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 4.3e-108 395.6 374 63.1
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.6e-107 393.7 369 63.7
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.4e-106 389.8 368 63.3
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 6.9e-106 388.3 371 61.5
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.0e-105 386.7 375 62.9
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.0e-105 386.7 364 62.6
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.4e-105 386.0 374 62.6
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.4e-105 386.0 368 62.8
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 7.6e-105 384.8 372 62.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.7e-104 383.6 377 62.9
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.7e-104 383.6 370 60.3
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.4e-104 381.7 370 60.5
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.4e-103 380.6 370 63.0
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.4e-103 379.8 370 60.3
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.2e-103 379.4 365 65.2
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 5.5e-103 378.6 370 62.2
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 3.5e-102 375.9 376 62.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.8e-101 373.6 374 59.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 6.7e-101 371.7 370 60.8
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 1.9e-100 370.2 375 61.6
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 1.6e-99 367.1 378 62.4
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.6e-99 367.1 414 58.7
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 8.1e-99 364.8 370 62.2
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 6.9e-98 361.7 389 58.6
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.2e-97 360.9 349 63.6
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.5e-97 360.5 367 59.9
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.6e-97 359.8 366 59.6
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 5.8e-97 358.6 357 64.7
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.4e-95 354.0 396 58.8
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.2e-95 352.4 350 59.1
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.6e-94 350.5 363 60.1
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.3e-93 346.7 374 56.7
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 6.7e-93 345.1 391 56.3
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.1e-92 344.4 373 56.6
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 5.7e-92 342.0 313 68.7
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.3e-91 340.9 378 57.9
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 6.3e-91 338.6 392 58.2
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 8.2e-91 338.2 368 55.7
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 4.1e-90 335.9 373 57.6
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 4.1e-90 335.9 376 56.9
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 4.1e-90 335.9 373 57.1
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 5.3e-90 335.5 407 54.1
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 6.9e-90 335.1 372 57.5
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 1.2e-89 334.3 365 55.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.2e-89 334.3 372 56.7
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.2e-89 334.3 314 66.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.2e-89 334.3 371 57.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.5e-89 334.0 372 56.5
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 5.0e-88 328.9 372 55.4
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 6.5e-88 328.6 365 54.2
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.4e-87 327.4 372 55.4
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.4e-87 327.4 372 55.4
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.4e-87 327.4 424 53.8
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 4.2e-87 325.9 372 54.8
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 7.2e-87 325.1 378 55.0
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 7.2e-87 325.1 389 56.0
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 7.2e-87 325.1 356 59.6
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.1e-86 323.6 363 57.3
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 4.6e-86 322.4 369 56.6
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 6.7e-85 318.5 293 62.1
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 7.4e-84 315.1 365 57.0
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 3.7e-83 312.8 378 53.2
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.1e-82 309.7 314 61.1
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 6.9e-82 308.5 361 56.0
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 9.0e-82 308.1 378 52.9
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.5e-81 307.4 369 52.6
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.5e-81 307.4 371 54.4
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.4e-81 306.2 360 56.1
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 9.4e-79 298.1 407 49.1
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 1.8e-77 293.9 379 52.0
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 2.3e-77 293.5 409 50.1
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 5.1e-77 292.4 369 53.1
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 1.1e-76 291.2 389 51.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 9.7e-76 288.1 316 59.2
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 1.0e-72 278.1 364 48.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.2e-70 271.2 374 49.5
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.3e-69 266.9 355 47.6
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 7.4e-68 261.9 379 51.2
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 9.7e-68 261.5 378 49.5
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.3e-67 261.2 324 54.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.8e-67 259.2 384 48.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.0e-64 251.5 372 46.2
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 1.7e-59 234.2 285 56.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 8.5e-56 221.9 327 48.6
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 2.7e-54 216.9 366 44.3
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 9.1e-50 201.8 293 48.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 2.7e-49 200.3 367 45.0
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 2.2e-48 197.2 410 40.0
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 8.5e-48 195.3 262 53.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 5.5e-47 192.6 303 45.2
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 5.7e-44 182.6 164 59.1
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.2e-41 174.9 291 44.3
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 6.6e-40 169.1 388 37.4
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.5e-39 167.2 148 60.1
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.8e-37 161.0 189 57.1
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-36 158.3 115 73.9
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 2.2e-35 154.1 316 42.1
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.2e-33 148.3 212 50.9
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.2e-19 100.9 69 79.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 3.7e-19 100.1 62 83.9
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 3.2e-18 97.1 215 43.7
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.5e-15 87.4 329 33.7
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 2.8e-14 84.0 304 32.2
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 3.4e-12 77.0 120 40.0
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 2.2e-11 74.3 189 38.6
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 6.4e-11 72.8 189 38.1
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.6e-09 68.2 36 83.3
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.1e-08 63.2 71 59.2
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.1e-06 55.8 149 36.9


User provided reference genes

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