Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0309 Papaver somniferum HOM05D005723 ORTHO05D005968 7.5e-164 580.5 299 100.0
PSO339G0271 Papaver somniferum HOM05D005723 ORTHO05D005968 4.3e-159 564.7 298 97.0
TAR623G0918 Trochodendron aralioides HOM05D005723 ORTHO05D005968 5.1e-88 328.6 301 59.1
Cfa020161 Carpinus fangiana HOM05D005723 ORTHO05D005968 6.1e-81 305.1 299 56.2
Potri.006G192800 Populus trichocarpa HOM05D005723 ORTHO05D005968 1.8e-80 303.5 230 63.5
RcHm_v2.0_Chr3g0479531 Rosa chinensis HOM05D005723 ORTHO05D005968 1.1e-79 300.8 297 54.9
HanXRQChr13g0390481 Helianthus annuus HOM05D005723 ORTHO05D005968 2.0e-79 300.1 235 64.3
Manes.08G043200 Manihot esculenta HOM05D005723 ORTHO05D005968 2.6e-79 299.7 298 54.7
QL07p023897 Quercus lobata HOM05D005723 ORTHO05D005968 2.6e-79 299.7 304 55.6
Aqoxy1G00026 Aquilegia oxysepala HOM05D005723 ORTHO05D005968 3.3e-79 299.3 197 70.1
FAN14G2504 Fragaria x ananassa HOM05D005723 ORTHO05D005968 4.4e-79 298.9 311 52.7
Sabra06G0148000 Salix brachista HOM05D005723 ORTHO05D005968 9.7e-79 297.7 230 63.5
CiPaw.09G030000 Carya illinoinensis HOM05D005723 ORTHO05D005968 1.7e-78 297.0 297 53.5
Nn2g15696 Nelumbo nucifera HOM05D005723 ORTHO05D005968 2.2e-78 296.6 303 55.8
Potri.016G045300 Populus trichocarpa HOM05D005723 ORTHO05D005968 2.2e-78 296.6 230 62.2
Sc13g0002300 Simmondsia chinensis HOM05D005723 ORTHO05D005968 2.2e-78 296.6 301 54.5
VMungo0720G2417 Vigna mungo HOM05D005723 ORTHO05D005968 6.3e-78 295.0 216 63.0
Actinidia17274 Actinidia chinensis HOM05D005723 ORTHO05D005968 8.2e-78 294.7 299 55.9
Phvul.007G260200 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 8.2e-78 294.7 216 61.6
MBI08_g23085_MAGBIO Magnolia biondii HOM05D005723 ORTHO05D005968 1.1e-77 294.3 241 59.3
MD12G1056700 Malus domestica HOM05D005723 ORTHO05D005968 1.4e-77 293.9 303 52.5
FAN02G2166 Fragaria x ananassa HOM05D005723 ORTHO05D005968 3.1e-77 292.7 308 52.3
Atru.chr8.1119 Acer truncatum HOM05D005723 ORTHO05D005968 7.0e-77 291.6 306 52.0
CANSAT64G2568 Cannabis sativa HOM05D005723 ORTHO05D005968 7.0e-77 291.6 298 54.0
GSVIVG01033492001 Vitis vinifera HOM05D005723 ORTHO05D005968 9.1e-77 291.2 234 59.4
CDE05G2791 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 1.5e-76 290.4 296 52.4
Prupe.7G077500 Prunus persica HOM05D005723 ORTHO05D005968 2.0e-76 290.0 302 53.3
MELO3C009621.2 Cucumis melo HOM05D005723 ORTHO05D005968 2.6e-76 289.7 279 56.3
CARHR137150 Cardamine hirsuta HOM05D005723 ORTHO05D005968 4.5e-76 288.9 298 52.7
Hma1.2p1_0648F.1_g195110 Hydrangea macrophylla HOM05D005723 ORTHO05D005968 4.5e-76 288.9 299 53.8
CDE05G1067 Ceratophyllum demersum HOM05D005723 ORTHO05D005968 1.3e-75 287.3 296 52.0
SGA_v2.0_scaffold274G46488 Striga asiatica HOM05D005723 ORTHO05D005968 1.7e-75 287.0 300 53.3
Peaxi162Scf00258g00623 Petunia axillaris HOM05D005723 ORTHO05D005968 2.2e-75 286.6 300 52.0
Glyma.09G111000 Glycine max HOM05D005723 ORTHO05D005968 2.9e-75 286.2 216 60.6
Lju124A25G33 Lonicera japonica HOM05D005723 ORTHO05D005968 2.9e-75 286.2 209 66.5
Sed0013306 Sechium edule HOM05D005723 ORTHO05D005968 6.5e-75 285.0 306 52.6
Lalb_Chr18g0047891 Lupinus albus HOM05D005723 ORTHO05D005968 8.5e-75 284.6 226 61.5
TWI53G1132 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 1.1e-74 284.3 306 52.9
Nitab4.5_0000324g0030 Nicotiana tabacum HOM05D005723 ORTHO05D005968 1.4e-74 283.9 198 65.2
EL10Ac3g06909 Beta vulgaris HOM05D005723 ORTHO05D005968 1.9e-74 283.5 245 59.6
Ah.04g152500 Amaranthus hybridus HOM05D005723 ORTHO05D005968 2.5e-74 283.1 287 53.0
Migut.K00036 Erythranthe guttata HOM05D005723 ORTHO05D005968 2.5e-74 283.1 302 52.3
Phvul.001G142700 Phaseolus vulgaris HOM05D005723 ORTHO05D005968 2.5e-74 283.1 210 62.9
Thhalv10017043m.g Eutrema salsugineum HOM05D005723 ORTHO05D005968 3.2e-74 282.7 286 52.8
Psat3g068400 Pisum sativum HOM05D005723 ORTHO05D005968 3.2e-74 282.7 244 56.1
Solyc03g062830.3 Solanum lycopersicum HOM05D005723 ORTHO05D005968 4.2e-74 282.3 299 52.5
Sopen03g015150 Solanum pennellii HOM05D005723 ORTHO05D005968 4.2e-74 282.3 299 52.5
Aa31LG1G24130 Aethionema arabicum HOM05D005723 ORTHO05D005968 5.5e-74 282.0 301 52.5
FvH4_6g22180 Fragaria vesca HOM05D005723 ORTHO05D005968 5.5e-74 282.0 281 54.1
Gohir.A09G128200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 5.5e-74 282.0 251 59.0
Glyma.19G148100 Glycine max HOM05D005723 ORTHO05D005968 9.4e-74 281.2 210 61.9
A03p23560 Brassica napus HOM05D005723 ORTHO05D005968 1.2e-73 280.8 297 52.9
Medtr7g093280 Medicago truncatula HOM05D005723 ORTHO05D005968 1.6e-73 280.4 210 60.0
VMungo1383G0807 Vigna mungo HOM05D005723 ORTHO05D005968 1.6e-73 280.4 245 56.7
Cc06_g15920 Coffea canephora HOM05D005723 ORTHO05D005968 2.1e-73 280.0 278 55.4
Carub.0004s2440 Capsella rubella HOM05D005723 ORTHO05D005968 2.7e-73 279.6 285 51.6
TPR.G18229 Trifolium pratense HOM05D005723 ORTHO05D005968 2.7e-73 279.6 210 60.5
Gohir.D09G124200 Gossypium hirsutum HOM05D005723 ORTHO05D005968 4.7e-73 278.9 251 58.6
BraA03t11573Z Brassica rapa HOM05D005723 ORTHO05D005968 8.0e-73 278.1 297 52.5
AT2G42070 Arabidopsis thaliana HOM05D005723 ORTHO05D005968 1.0e-72 277.7 286 51.4
BcaB01g03439 Brassica carinata HOM05D005723 ORTHO05D005968 1.0e-72 277.7 296 52.4
Ca_08526_v3 Cicer arietinum L. HOM05D005723 ORTHO05D005968 1.0e-72 277.7 248 54.8
BcaNung04410 Brassica carinata HOM05D005723 ORTHO05D005968 1.4e-72 277.3 304 51.6
Zm00001eb320790 Zea mays HOM05D005723 ORTHO05D005968 1.4e-72 277.3 195 62.6
AL4G40430 Arabidopsis lyrata HOM05D005723 ORTHO05D005968 1.8e-72 276.9 297 50.2
MSTRG.6477 Avicennia marina HOM05D005723 ORTHO05D005968 2.3e-72 276.6 295 51.9
Gorai.006G143000 Gossypium raimondii HOM05D005723 ORTHO05D005968 2.3e-72 276.6 252 58.7
COL.COLO4_33978 Corchorus olitorius HOM05D005723 ORTHO05D005968 3.0e-72 276.2 197 64.5
Lj1g0008741 Lotus japonicus HOM05D005723 ORTHO05D005968 3.0e-72 276.2 293 51.2
A05p02710 Brassica napus HOM05D005723 ORTHO05D005968 8.8e-72 274.6 296 51.4
FAN05G3703 Fragaria x ananassa HOM05D005723 ORTHO05D005968 1.5e-71 273.9 292 52.4
THA.LOC104824477 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 2.0e-71 273.5 309 49.8
Hund24799 Selenicereus undatus HOM05D005723 ORTHO05D005968 3.3e-71 272.7 241 57.7
THA.LOC104802583 Tarenaya hassleriana HOM05D005723 ORTHO05D005968 4.4e-71 272.3 307 49.8
BcaC01g05310 Brassica carinata HOM05D005723 ORTHO05D005968 5.7e-71 271.9 285 52.3
BraA05t19263Z Brassica rapa HOM05D005723 ORTHO05D005968 5.7e-71 271.9 262 53.8
ClCG10G017570 Citrullus lanatus HOM05D005723 ORTHO05D005968 7.4e-71 271.6 224 59.8
Zm00001eb104410 Zea mays HOM05D005723 ORTHO05D005968 1.7e-70 270.4 195 61.5
BcaC02g12456 Brassica carinata HOM05D005723 ORTHO05D005968 2.2e-70 270.0 263 54.4
BolC3t15179H Brassica oleracea HOM05D005723 ORTHO05D005968 2.2e-70 270.0 285 51.9
BolC4t21962H Brassica oleracea HOM05D005723 ORTHO05D005968 2.2e-70 270.0 263 54.4
Rhsim04G0096600 Rhododendron simsii HOM05D005723 ORTHO05D005968 6.3e-70 268.5 294 52.4
HPP92_009024 Vanilla planifolia HOM05D005723 ORTHO05D005968 1.4e-69 267.3 270 51.5
C04p03240 Brassica napus HOM05D005723 ORTHO05D005968 1.8e-69 266.9 263 54.0
Dinv14303 Davidia involucrata HOM05D005723 ORTHO05D005968 3.5e-68 262.7 259 57.1
MD14G1055000 Malus domestica HOM05D005723 ORTHO05D005968 7.7e-68 261.5 278 51.1
Duzib093G0286 Durio zibethinus HOM05D005723 ORTHO05D005968 1.3e-67 260.8 280 52.1
Thecc.05G171800 Theobroma cacao HOM05D005723 ORTHO05D005968 2.2e-67 260.0 304 47.4
ATR0807G138 Amborella trichopoda HOM05D005723 ORTHO05D005968 2.9e-67 259.6 278 49.3
PGR142G4063 Punica granatum HOM05D005723 ORTHO05D005968 3.8e-67 259.2 221 57.0
Glyma.03G145000 Glycine max HOM05D005723 ORTHO05D005968 6.5e-67 258.5 191 61.8
Pp3c12_9930 Physcomitrium patens HOM05D005723 ORTHO05D005968 1.9e-66 256.9 245 54.3
Ciclev10013558m.g Citrus clementina HOM05D005723 ORTHO05D005968 5.5e-66 255.4 254 52.4
DCAR_019848 Daucus carota HOM05D005723 ORTHO05D005968 7.2e-66 255.0 302 50.7
Lsat_1_v5_gn_5_163580 Lactuca sativa HOM05D005723 ORTHO05D005968 8.0e-65 251.5 297 50.8
Nitab4.5_0002488g0020 Nicotiana tabacum HOM05D005723 ORTHO05D005968 1.8e-64 250.4 282 51.8
Sp4g24280 Schrenkiella parvula HOM05D005723 ORTHO05D005968 2.0e-63 246.9 299 49.2
arahy.Tifrunner.gnm1.ann1.USMU0G Arachis hypogaea HOM05D005723 ORTHO05D005968 2.8e-62 243.0 242 52.5
C03p28100 Brassica napus HOM05D005723 ORTHO05D005968 1.4e-61 240.7 278 50.7
Oeu024483.2 Olea europaea HOM05D005723 ORTHO05D005968 4.1e-61 239.2 269 48.7
SMO358G0738 Selaginella moellendorffii HOM05D005723 ORTHO05D005968 5.3e-61 238.8 199 58.3
CsaV3_3G038770 Cucumis sativus L. HOM05D005723 ORTHO05D005968 1.3e-59 234.2 237 54.0
Cpa.g.sc85.50 Carica papaya HOM05D005723 ORTHO05D005968 5.5e-58 228.8 294 46.9
SalBow1G1145 Salvia bowleyana HOM05D005723 ORTHO05D005968 7.2e-58 228.4 267 50.2
AUR62015361 Chenopodium quinoa HOM05D005723 ORTHO05D005968 3.6e-57 226.1 159 67.3
HanXRQChr01g0009761 Helianthus annuus HOM05D005723 ORTHO05D005968 6.1e-57 225.3 159 65.4
Oeu034265.1 Olea europaea HOM05D005723 ORTHO05D005968 1.4e-56 224.2 157 66.2
AUR62012024 Chenopodium quinoa HOM05D005723 ORTHO05D005968 4.0e-56 222.6 151 68.2
ECA248G2266 Erigeron canadensis HOM05D005723 ORTHO05D005968 8.3e-54 214.9 159 63.5
arahy.Tifrunner.gnm1.ann1.4E6ATU Arachis hypogaea HOM05D005723 ORTHO05D005968 1.4e-53 214.2 222 49.5
Cre06.g285200 Chlamydomonas reinhardtii HOM05D005723 ORTHO05D005968 7.0e-53 211.8 243 47.3
SEGI_25574 Sequoiadendron giganteum HOM05D005723 ORTHO05D005968 8.6e-51 204.9 139 67.6
PRCOL_00004505 Prasinoderma coloniale HOM05D005723 ORTHO05D005968 2.3e-48 196.8 199 48.2
unitig_748.g7589 Utricularia gibba HOM05D005723 ORTHO05D005968 2.2e-46 190.3 142 65.5
HPP92_009080 Vanilla planifolia HOM05D005723 ORTHO05D005968 2.3e-43 180.3 123 63.4
Os09g0553300 Oryza sativa ssp. japonica HOM05D005723 ORTHO05D005968 3.9e-43 179.5 110 70.0
Sed0026560 Sechium edule HOM05D005723 ORTHO05D005968 1.2e-41 174.5 194 48.5
arahy.Tifrunner.gnm1.ann1.WEU379 Arachis hypogaea HOM05D005723 ORTHO05D005968 1.8e-40 170.6 350 36.3
Haze_19996 Corylus avellana HOM05D005723 ORTHO05D005968 9.8e-39 164.9 125 66.4
Mapoly0013s0082 Marchantia polymorpha HOM05D005723 ORTHO05D005968 9.8e-39 164.9 190 47.9
Actinidia38586 Actinidia chinensis HOM05D005723 ORTHO05D005968 6.4e-38 162.2 300 41.7
MSTRG.10844 Avicennia marina HOM05D005723 ORTHO05D005968 8.3e-38 161.8 125 65.6
AagrBONN_evm.TU.Sc2ySwM_117.3227 Anthoceros agrestis HOM05D005723 ORTHO05D005968 1.4e-37 161.0 128 57.8
TWI74G1261 Tripterygium wilfordii HOM05D005723 ORTHO05D005968 1.0e-35 154.8 308 37.3
arahy.Tifrunner.gnm1.ann1.HLHI9C Arachis hypogaea HOM05D005723 ORTHO05D005968 1.1e-34 151.4 118 61.0
Pp3c3_14150 Physcomitrium patens HOM05D005723 ORTHO05D005968 2.0e-31 140.6 187 43.3
C05p20370 Brassica napus HOM05D005723 ORTHO05D005968 9.2e-29 131.7 116 57.8
BolC5t30732H Brassica oleracea HOM05D000589 ORTHO05D005968 9.2e-29 131.7 116 57.8
CBR_g29504 Chara braunii HOM05D005723 ORTHO05D005968 4.3e-26 122.9 191 35.6
Gohir.A10G137800 Gossypium hirsutum HOM05D005723 ORTHO05D005968 1.6e-20 104.4 90 57.8
Gohir.A13G075901 Gossypium hirsutum HOM05D005723 ORTHO05D005968 7.3e-18 95.5 77 55.8
BolC3t15180H Brassica oleracea HOM05D005723 ORTHO05D005968 1.2e-15 88.2 113 42.5
MCO15G614 Micromonas commoda HOM05D005723 ORTHO05D005968 4.4e-15 86.3 152 34.2
vmacro09121 Vaccinium macrocarpon HOM05D005723 ORTHO05D005968 9.6e-10 68.6 113 38.9
BcaC05g26057 Brassica carinata HOM05D005723 ORTHO05D005968 1.8e-08 64.3 61 50.8
Haze_19995 Corylus avellana HOM05D005723 ORTHO05D005968 2.4e-08 63.9 110 38.2


User provided reference genes

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