Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 2.7e-64 248.8 155 100.0
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 2.3e-60 235.7 157 96.8
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 1.7e-26 123.2 151 63.6
Aqoxy1G00045 Aquilegia oxysepala HOM05D005060 ORTHO05D005975 5.7e-22 108.2 160 57.5
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 4.5e-19 98.6 152 52.6
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 4.5e-19 98.6 147 57.8
DCAR_009091 Daucus carota HOM05D005060 ORTHO05D005975 7.6e-19 97.8 150 56.7
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 1.0e-18 97.4 141 55.3
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 1.7e-18 96.7 141 55.3
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 2.9e-18 95.9 149 47.0
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 5.0e-18 95.1 124 51.6
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 1.9e-17 93.2 138 54.3
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 3.2e-17 92.4 153 53.6
MSTRG.6293 Avicennia marina HOM05D005060 ORTHO05D005975 7.1e-17 91.3 151 55.6
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.6e-16 90.1 149 53.0
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.6e-16 90.1 149 53.0
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.7e-16 89.4 144 44.4
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 4.6e-16 88.6 151 53.6
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 4.6e-16 88.6 127 56.7
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.0e-15 87.4 143 46.2
Peaxi162Scf00153g01321 Petunia axillaris HOM05D005060 ORTHO05D005975 1.3e-15 87.0 140 54.3
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 1.8e-15 86.7 151 53.0
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 6.7e-15 84.7 153 46.4
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 1.1e-14 84.0 154 48.1
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 1.5e-14 83.6 144 52.8
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 1.9e-14 83.2 155 43.9
MBI19_g25016_MAGBIO Magnolia biondii HOM05D005060 ORTHO05D005975 3.3e-14 82.4 170 48.8
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 4.3e-14 82.0 154 42.2
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 5.7e-14 81.6 95 50.5
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 3.7e-13 79.0 137 40.1
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 4.8e-13 78.6 163 41.1
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 8.2e-13 77.8 144 43.1
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 1.8e-12 76.6 136 41.2
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 2.4e-12 76.3 148 46.6
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 4.1e-12 75.5 147 47.6
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 1.2e-11 73.9 119 42.0
Actinidia24546 Actinidia chinensis HOM05D005060 ORTHO05D005975 4.5e-11 72.0 129 52.7
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 4.5e-11 72.0 151 39.1
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 5.9e-11 71.6 151 43.0
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 7.7e-11 71.2 150 40.0
CSS0016899 Camellia sinensis var. sinensis HOM05D005060 ORTHO05D005975 1.7e-10 70.1 154 48.7
ATR0787G086 Amborella trichopoda HOM05D005060 ORTHO05D005975 2.9e-10 69.3 162 48.8
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 2.9e-10 69.3 155 41.3
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 3.8e-10 68.9 156 40.4
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 8.5e-10 67.8 151 42.4
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 1.9e-09 66.6 152 37.5
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 1.9e-09 66.6 147 40.1
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 2.5e-09 66.2 158 41.1
SGA_v2.0_scaffold66G22311 Striga asiatica HOM05D005060 ORTHO05D005975 2.5e-09 66.2 152 38.2
CANSAT78G0005 Cannabis sativa HOM05D005060 ORTHO05D005975 3.2e-09 65.9 147 48.3
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 3.2e-09 65.9 147 38.8
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 4.2e-09 65.5 129 39.5
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 4.2e-09 65.5 128 45.3
Lalb_Chr14g0365381 Lupinus albus HOM05D005060 ORTHO05D005975 5.5e-09 65.1 151 41.7
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 5.5e-09 65.1 135 40.0
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 5.5e-09 65.1 151 37.7
CDE04G0407 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 7.2e-09 64.7 152 52.0
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 7.2e-09 64.7 148 44.6
FAN03G0591 Fragaria x ananassa HOM05D005060 ORTHO05D005975 7.2e-09 64.7 151 37.1
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 1.6e-08 63.5 154 40.3
CAN.G959.26 Capsicum annuum HOM05D005060 ORTHO05D005975 2.1e-08 63.2 151 45.0
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 2.1e-08 63.2 153 38.6
SGA_v2.0_scaffold69G23194 Striga asiatica HOM05D005060 ORTHO05D005975 2.1e-08 63.2 109 50.5
Sopen10g028770 Solanum pennellii HOM05D005060 ORTHO05D005975 2.7e-08 62.8 153 47.7
PGSC0003DMG400007184 Solanum tuberosum HOM05D005060 ORTHO05D005975 2.7e-08 62.8 124 51.6
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 3.6e-08 62.4 147 51.0
Gohir.A13G001200 Gossypium hirsutum HOM05D005060 ORTHO05D005975 3.6e-08 62.4 157 38.2
Lalb_Chr22g0358011 Lupinus albus HOM05D005060 ORTHO05D005975 3.6e-08 62.4 162 37.7
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 4.6e-08 62.0 148 45.9
CDE02G1443 Ceratophyllum demersum HOM05D005060 ORTHO05D005975 4.6e-08 62.0 151 49.7
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 4.6e-08 62.0 141 42.6
Nitab4.5_0001270g0130 Nicotiana tabacum HOM05D005060 ORTHO05D005975 7.9e-08 61.2 114 51.8
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 3.0e-07 59.3 152 36.2
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 3.0e-07 59.3 153 43.1
Hund24512 Selenicereus undatus HOM05D005060 ORTHO05D005975 3.9e-07 58.9 151 43.7
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 5.1e-07 58.5 122 39.3
CiPaw.10G123900 Carya illinoinensis HOM05D005060 ORTHO05D005975 5.1e-07 58.5 118 50.0
AUR62020993 Chenopodium quinoa HOM05D005060 ORTHO05D005975 5.1e-07 58.5 97 54.6
Solyc10g077090.2 Solanum lycopersicum HOM05D005060 ORTHO05D005975 8.8e-07 57.8 153 47.1
Os01g0278900 Oryza sativa ssp. japonica HOM05D005060 ORTHO05D005975 1.1e-06 57.4 158 34.2
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.1e-06 57.4 141 34.0
BcaC08g44810 Brassica carinata HOM05D005060 ORTHO05D005975 2.0e-06 56.6 101 42.6
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 2.0e-06 56.6 141 41.8
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 2.0e-06 56.6 153 36.6
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 2.0e-06 56.6 147 32.7
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 3.3e-06 55.8 152 36.2
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 5.7e-06 55.1 147 36.1
unitig_744.g24164 Utricularia gibba HOM05D003084 ORTHO05D003580 5.7e-06 55.1 92 40.2
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 7.4e-06 54.7 138 34.1
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 9.7e-06 54.3 152 39.5


User provided reference genes

Program Settings