Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 7.2e-308 1059.7 513 100.0
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 9.2e-287 989.6 513 94.5
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 2.1e-222 775.8 507 75.1
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 9.7e-220 766.9 493 74.8
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 5.3e-218 761.1 489 75.3
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.2e-217 760.0 513 71.7
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.3e-216 756.5 495 73.1
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.3e-216 756.5 491 73.9
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 2.2e-216 755.7 516 71.7
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 8.5e-216 753.8 519 71.1
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 8.5e-216 753.8 458 77.7
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.1e-215 753.4 466 77.3
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 1.1e-215 753.4 458 77.5
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 3.2e-215 751.9 486 74.3
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.2e-215 751.5 456 77.2
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 2.7e-214 748.8 461 77.7
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.6e-214 748.4 456 76.8
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 6.1e-214 747.7 468 76.5
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.4e-213 746.5 475 75.2
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 1.4e-213 746.5 478 73.6
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.3e-213 745.7 456 77.0
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 5.1e-213 744.6 509 70.7
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 5.1e-213 744.6 456 75.7
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.1e-212 743.4 457 76.4
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 2.0e-212 742.7 465 76.6
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 7.4e-212 740.7 456 77.2
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 7.4e-212 740.7 474 74.1
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 9.7e-212 740.3 463 75.8
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 2.2e-211 739.2 456 77.0
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 1.1e-210 736.9 491 72.3
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.1e-210 734.9 487 72.5
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 4.1e-210 734.9 456 76.1
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.5e-209 733.0 499 71.1
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.0e-209 732.6 474 73.6
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 2.6e-209 732.3 503 69.6
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 3.5e-209 731.9 500 70.6
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 3.5e-209 731.9 504 70.2
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 7.7e-209 730.7 476 72.9
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 1.3e-208 729.9 497 71.6
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.7e-208 729.6 474 74.1
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 2.9e-208 728.8 457 74.8
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 5.0e-208 728.0 467 75.8
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 5.0e-208 728.0 490 71.6
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 6.5e-208 727.6 482 72.2
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 1.1e-207 726.9 506 69.8
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.5e-207 726.5 456 74.8
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.5e-207 726.5 487 71.9
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 2.5e-207 725.7 482 72.0
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.2e-206 723.4 473 72.9
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 1.2e-206 723.4 511 69.9
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 2.1e-206 722.6 507 68.8
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 2.7e-206 722.2 457 75.7
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 2.7e-206 722.2 456 74.6
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.7e-206 722.2 485 70.9
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 3.6e-206 721.8 491 72.7
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 4.7e-206 721.5 482 71.2
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 4.7e-206 721.5 502 69.7
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 4.7e-206 721.5 515 68.7
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 4.7e-206 721.5 466 74.7
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 6.1e-206 721.1 482 71.4
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 8.0e-206 720.7 482 71.0
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 8.0e-206 720.7 503 69.8
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.0e-205 720.3 456 74.3
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 1.0e-205 720.3 518 68.7
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.4e-205 719.9 478 72.0
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 5.2e-205 718.0 465 73.5
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 6.7e-205 717.6 458 74.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 6.7e-205 717.6 456 75.2
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 8.8e-205 717.2 492 71.5
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 1.5e-204 716.5 456 73.0
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 2.6e-204 715.7 456 74.1
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 9.7e-204 713.8 504 67.5
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 2.2e-203 712.6 493 69.2
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.8e-203 711.4 493 69.2
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 8.2e-203 710.7 504 68.7
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 2.4e-202 709.1 504 68.7
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 2.4e-202 709.1 506 68.8
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.1e-202 708.8 510 67.5
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 5.3e-202 708.0 519 67.1
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 7.0e-202 707.6 480 71.7
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 9.1e-202 707.2 480 71.7
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.2e-201 706.8 471 72.2
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 3.5e-201 705.3 546 65.8
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.0e-200 703.7 484 69.0
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 2.2e-200 702.6 444 75.0
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 3.8e-200 701.8 472 72.9
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 1.5e-199 699.9 498 68.7
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 3.2e-199 698.7 505 66.3
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 3.2e-199 698.7 458 71.4
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 2.0e-193 679.5 506 66.0
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 1.0e-184 650.6 460 68.7
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 2.3e-184 649.4 471 67.1
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 8.3e-179 630.9 478 61.9
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 3.3e-175 619.0 484 64.3
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 4.0e-173 612.1 475 61.7
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 5.8e-172 608.2 500 60.0
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 1.3e-171 607.1 475 63.4
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 2.2e-171 606.3 451 63.6
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.0e-168 597.4 465 63.9
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.8e-165 586.6 367 77.1
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 4.4e-164 582.0 359 74.4
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 3.7e-163 578.9 428 67.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 7.1e-154 548.1 503 56.1
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 5.8e-140 501.9 326 73.9
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.3e-126 457.6 493 52.3
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 3.9e-120 436.0 454 48.2
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 1.1e-117 427.9 319 68.0
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 6.7e-112 408.7 473 47.4
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 2.8e-110 403.3 265 72.8
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 4.1e-101 372.9 481 43.2
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.4e-80 304.7 463 38.7
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.0e-39 167.9 227 41.0
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.3e-35 154.5 101 70.3
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 4.7e-33 146.7 96 72.9
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 4.7e-33 146.7 96 72.9
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 4.7e-33 146.7 96 72.9
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 4.7e-33 146.7 96 72.9
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 2.8e-25 120.9 281 33.1
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 7.6e-23 112.8 78 65.4
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 6.2e-17 93.2 56 75.0
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 2.3e-11 74.7 43 81.4
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 5.3e-08 63.5 40 70.0
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 2.0e-07 61.6 41 75.6
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 4.9e-06 57.0 68 45.6


User provided reference genes

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