Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0199 Papaver somniferum HOM05D006281 ORTHO05D005138 7.4e-93 344.4 246 100.0
PSO339G5625 Papaver somniferum HOM05D006281 ORTHO05D005138 9.4e-72 274.2 246 84.6
PSO384G4516 Papaver somniferum HOM05D006281 ORTHO05D005138 9.3e-27 124.8 303 39.6
PSO339G3794 Papaver somniferum HOM05D006281 ORTHO05D005138 4.3e-24 115.9 69 81.2
PSO832G0699 Papaver somniferum HOM05D002788 ORTHO05D005138 9.0e-14 81.6 229 33.2
MSTRG.8320 Avicennia marina HOM05D006281 ORTHO05D005138 1.2e-13 81.3 70 58.6
PSO013G0071 Papaver somniferum HOM05D002788 ORTHO05D005138 1.7e-12 77.4 65 66.2
HanXRQChr12g0367471 Helianthus annuus HOM05D006281 ORTHO05D005138 2.9e-12 76.6 68 51.5
Nitab4.5_0000802g0130 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.4e-11 74.3 58 58.6
Nitab4.5_0005628g0020 Nicotiana tabacum HOM05D006281 ORTHO05D005138 1.9e-11 73.9 62 54.8
MBI14_g22157_MAGBIO Magnolia biondii HOM05D006281 ORTHO05D005138 5.5e-11 72.4 61 59.0
Lalb_Chr02g0148591 Lupinus albus HOM05D006281 ORTHO05D005138 1.2e-10 71.2 68 54.4
Lj5g0025792 Lotus japonicus HOM05D006281 ORTHO05D005138 1.6e-10 70.9 66 53.0
Nn2g11433 Nelumbo nucifera HOM05D006281 ORTHO05D005138 1.6e-10 70.9 64 54.7
Medtr1g111700 Medicago truncatula HOM05D006281 ORTHO05D005138 2.1e-10 70.5 64 57.8
Sc07g0006300 Simmondsia chinensis HOM05D006281 ORTHO05D005138 2.1e-10 70.5 70 51.4
AUR62040493 Chenopodium quinoa HOM05D006281 ORTHO05D005138 2.7e-10 70.1 242 28.1
ECA233G1951 Erigeron canadensis HOM05D006281 ORTHO05D005138 6.0e-10 68.9 68 50.0
SalBow6G7137 Salvia bowleyana HOM05D006281 ORTHO05D005138 6.0e-10 68.9 70 51.4
VMungo0720G2983 Vigna mungo HOM05D006281 ORTHO05D005138 7.9e-10 68.6 70 54.3
Dinv20972 Davidia involucrata HOM05D000895 ORTHO05D002393 1.0e-09 68.2 61 59.0
Dinv21033 Davidia involucrata HOM05D000895 ORTHO05D002393 1.0e-09 68.2 61 59.0
Manes.10G014800 Manihot esculenta HOM05D006281 ORTHO05D005138 1.0e-09 68.2 66 54.5
TAR633G0389 Trochodendron aralioides HOM05D006281 ORTHO05D005138 1.0e-09 68.2 66 54.5
Zm00001eb050100 Zea mays HOM05D006281 ORTHO05D005138 1.0e-09 68.2 62 50.0
PGR142G2831 Punica granatum HOM05D006281 ORTHO05D005138 1.8e-09 67.4 63 50.8
Phvul.007G184700 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 2.3e-09 67.0 70 57.1
vmacro06983 Vaccinium macrocarpon HOM05D006281 ORTHO05D005138 3.0e-09 66.6 62 54.8
TPR.G2715 Trifolium pratense HOM05D006281 ORTHO05D005138 3.9e-09 66.2 72 48.6
TAR623G1110 Trochodendron aralioides HOM05D000895 ORTHO05D005138 3.9e-09 66.2 58 58.6
Manes.07G127600 Manihot esculenta HOM05D006281 ORTHO05D005138 5.1e-09 65.9 61 54.1
QL08p063014 Quercus lobata HOM05D006281 ORTHO05D005138 5.1e-09 65.9 67 44.8
Medtr1g111690 Medicago truncatula HOM05D006281 ORTHO05D005138 6.7e-09 65.5 63 57.1
Manes.10G015100 Manihot esculenta HOM05D006281 ORTHO05D005138 8.7e-09 65.1 64 51.6
arahy.Tifrunner.gnm1.ann1.0XLH38 Arachis hypogaea HOM05D006281 ORTHO05D005138 1.5e-08 64.3 71 46.5
Cc02_g06760 Coffea canephora HOM05D006281 ORTHO05D005138 1.5e-08 64.3 58 48.3
Peaxi162Scf01313g00024 Petunia axillaris HOM05D006281 ORTHO05D005138 1.5e-08 64.3 69 47.8
Ca_10064_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 1.9e-08 63.9 63 52.4
SalBow3G2112 Salvia bowleyana HOM05D006281 ORTHO05D005138 1.9e-08 63.9 63 49.2
Actinidia29689 Actinidia chinensis HOM05D006949 ORTHO05D008621 2.5e-08 63.5 64 45.3
Glyma.10G159300 Glycine max HOM05D006281 ORTHO05D005138 2.5e-08 63.5 63 52.4
Prupe.2G247900 Prunus persica HOM05D006281 ORTHO05D005138 2.5e-08 63.5 68 47.1
arahy.Tifrunner.gnm1.ann1.ZTR0B0 Arachis hypogaea HOM05D006281 ORTHO05D005138 3.3e-08 63.2 71 46.5
EL10Ac7g16532 Beta vulgaris HOM05D006281 ORTHO05D005138 3.3e-08 63.2 69 47.8
AUR62043156 Chenopodium quinoa HOM05D006281 ORTHO05D005138 3.3e-08 63.2 59 50.8
Duzib114G0722 Durio zibethinus HOM05D006949 ORTHO05D008621 3.3e-08 63.2 70 50.0
THA.LOC104824311 Tarenaya hassleriana HOM05D006281 ORTHO05D005138 3.3e-08 63.2 66 47.0
Actinidia33937 Actinidia chinensis HOM05D006281 ORTHO05D005138 4.3e-08 62.8 64 45.3
Medtr6g033440 Medicago truncatula HOM05D006281 ORTHO05D005138 4.3e-08 62.8 64 53.1
Nitab4.5_0000802g0120 Nicotiana tabacum HOM05D006281 ORTHO05D005138 4.3e-08 62.8 67 47.8
Zm00001eb050110 Zea mays HOM05D006281 ORTHO05D005138 4.3e-08 62.8 64 43.8
ATR0618G177 Amborella trichopoda HOM05D006281 ORTHO05D005138 5.6e-08 62.4 61 54.1
CsaV3_6G001730 Cucumis sativus L. HOM05D006281 ORTHO05D005138 5.6e-08 62.4 64 50.0
Medtr1g081780 Medicago truncatula HOM05D006281 ORTHO05D005138 5.6e-08 62.4 63 54.0
CAN.G372.4 Capsicum annuum HOM05D006281 ORTHO05D005138 7.4e-08 62.0 64 45.3
ClCG11G006260 Citrullus lanatus HOM05D006281 ORTHO05D005138 7.4e-08 62.0 59 54.2
MELO3C029900.2 Cucumis melo HOM05D006281 ORTHO05D005138 9.6e-08 61.6 59 52.5
FvH4_7g24210 Fragaria vesca HOM05D006281 ORTHO05D005138 9.6e-08 61.6 64 43.8
Lsat_1_v5_gn_8_31300 Lactuca sativa HOM05D006281 ORTHO05D005138 9.6e-08 61.6 55 49.1
Nitab4.5_0005628g0030 Nicotiana tabacum HOM05D006281 ORTHO05D005138 9.6e-08 61.6 67 47.8
Atru.chr12.10 Acer truncatum HOM05D006281 ORTHO05D005138 1.3e-07 61.2 68 48.5
CANSAT56G0859 Cannabis sativa HOM05D006281 ORTHO05D005138 1.3e-07 61.2 69 46.4
Potri.010G190800 Populus trichocarpa HOM05D006281 ORTHO05D005138 1.3e-07 61.2 61 52.5
PGR142G2970 Punica granatum HOM05D006281 ORTHO05D005138 1.3e-07 61.2 59 49.2
Glyma.20G229400 Glycine max HOM05D006281 ORTHO05D005138 1.6e-07 60.8 63 50.8
Psat6g147880 Pisum sativum HOM05D006281 ORTHO05D005138 1.6e-07 60.8 57 52.6
RcHm_v2.0_Chr1g0369781 Rosa chinensis HOM05D006281 ORTHO05D005138 1.6e-07 60.8 72 43.1
Solyc06g030540.4 Solanum lycopersicum HOM05D006281 ORTHO05D005138 1.6e-07 60.8 64 45.3
FAN01G2469 Fragaria x ananassa HOM05D006281 ORTHO05D005138 2.1e-07 60.5 70 41.4
FAN06G1003 Fragaria x ananassa HOM05D006281 ORTHO05D005138 2.1e-07 60.5 70 41.4
Psat0s288g0040 Pisum sativum HOM05D006281 ORTHO05D005138 2.1e-07 60.5 59 50.8
Sopen06g008590 Solanum pennellii HOM05D006281 ORTHO05D005138 2.1e-07 60.5 64 45.3
FAN10G2794 Fragaria x ananassa HOM05D006949 ORTHO05D008621 2.8e-07 60.1 64 43.8
Gorai.011G284000 Gossypium raimondii HOM05D006281 ORTHO05D005138 2.8e-07 60.1 62 48.4
Phvul.008G225200 Phaseolus vulgaris HOM05D006281 ORTHO05D005138 2.8e-07 60.1 67 47.8
TPR.G19854 Trifolium pratense HOM05D006281 ORTHO05D005138 2.8e-07 60.1 74 44.6
Gohir.A10G234000 Gossypium hirsutum HOM05D006281 ORTHO05D005138 3.7e-07 59.7 62 50.0
Medtr5g082250 Medicago truncatula HOM05D006281 ORTHO05D005138 3.7e-07 59.7 70 45.7
CANSAT56G1147 Cannabis sativa HOM05D006281 ORTHO05D005138 4.8e-07 59.3 69 44.9
FAN03G1065 Fragaria x ananassa HOM05D006281 ORTHO05D005138 4.8e-07 59.3 62 43.5
Nitab4.5_0005628g0040 Nicotiana tabacum HOM05D006281 ORTHO05D005138 4.8e-07 59.3 64 45.3
TWI53G0395 Tripterygium wilfordii HOM05D006281 ORTHO05D005138 4.8e-07 59.3 62 43.5
unitig_0.g237 Utricularia gibba HOM05D062541 ORTHO05D005138 4.8e-07 59.3 45 57.8
Nitab4.5_0000802g0100 Nicotiana tabacum HOM05D006281 ORTHO05D005138 6.2e-07 58.9 64 45.3
Ciclev10033546m.g Citrus clementina HOM05D006281 ORTHO05D005138 1.1e-06 58.2 60 45.0
Sed0005546 Sechium edule HOM05D006281 ORTHO05D005138 1.1e-06 58.2 62 48.4
Thecc.10G022800 Theobroma cacao HOM05D006281 ORTHO05D005138 1.1e-06 58.2 60 48.3
Cc02_g06750 Coffea canephora HOM05D006281 ORTHO05D005138 1.4e-06 57.8 66 43.9
DCAR_032142 Daucus carota HOM05D006281 ORTHO05D005138 1.4e-06 57.8 62 46.8
Thhalv10017194m.g Eutrema salsugineum HOM05D010943 ORTHO05D005138 1.4e-06 57.8 71 43.7
LjContig00357g0022557 Lotus japonicus HOM05D006281 ORTHO05D005138 1.4e-06 57.8 68 45.6
Haze_18961 Corylus avellana HOM05D006281 ORTHO05D005138 1.8e-06 57.4 67 44.8
Haze_17206 Corylus avellana HOM05D006281 ORTHO05D005138 4.0e-06 56.2 73 41.1
FvH4_2g13151 Fragaria vesca HOM05D006281 ORTHO05D005138 4.0e-06 56.2 45 53.3
FAN20G0701 Fragaria x ananassa HOM05D006281 ORTHO05D005138 4.0e-06 56.2 45 53.3
Gohir.D10G246300 Gossypium hirsutum HOM05D006281 ORTHO05D005138 4.0e-06 56.2 59 47.5
MD17G1067400 Malus domestica HOM05D006281 ORTHO05D005138 5.3e-06 55.8 66 42.4
Cfa001348 Carpinus fangiana HOM05D006281 ORTHO05D005138 6.9e-06 55.5 75 38.7
Ca_05949_v3 Cicer arietinum L. HOM05D006281 ORTHO05D005138 6.9e-06 55.5 58 50.0
FAN15G2203 Fragaria x ananassa HOM05D006281 ORTHO05D005138 6.9e-06 55.5 45 53.3
Lalb_Chr10g0105101 Lupinus albus HOM05D006281 ORTHO05D005138 6.9e-06 55.5 59 45.8
Oeu025174.1 Olea europaea HOM05D006281 ORTHO05D005138 6.9e-06 55.5 63 44.4
Actinidia13926 Actinidia chinensis HOM05D006281 ORTHO05D005138 9.0e-06 55.1 47 51.1
QL05p066700 Quercus lobata HOM05D006281 ORTHO05D005138 9.0e-06 55.1 67 44.8


User provided reference genes

Program Settings