Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 1.7e-64 249.2 128 100.0
PSO339G5978 Papaver somniferum HOM05D008423 ORTHO05D010599 5.6e-60 234.2 128 93.0
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 1.2e-14 83.6 129 40.3
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 1.2e-14 83.6 125 39.2
Aqoxy148s005 Aquilegia oxysepala HOM05D008423 ORTHO05D010599 1.0e-13 80.5 105 46.7
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 1.7e-11 73.2 87 47.1
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 3.7e-11 72.0 115 41.7
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 8.3e-11 70.9 123 40.7
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 1.8e-10 69.7 109 42.2
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 7.0e-10 67.8 59 64.4
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 9.1e-10 67.4 117 35.0
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 1.2e-09 67.0 119 38.7
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 1.6e-09 66.6 129 40.3
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 1.6e-09 66.6 129 37.2
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 2.7e-09 65.9 99 39.4
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 7.7e-09 64.3 108 46.3
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 1.0e-08 63.9 127 34.6
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 1.7e-08 63.2 92 38.0
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 1.7e-08 63.2 113 38.9
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 1.7e-08 63.2 112 38.4
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 1.7e-08 63.2 122 36.9
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 2.2e-08 62.8 104 42.3
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 2.2e-08 62.8 127 41.7
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 2.2e-08 62.8 127 41.7
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 2.9e-08 62.4 125 36.8
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 2.9e-08 62.4 88 45.5
HanXRQChr15g0480651 Helianthus annuus HOM05D008423 ORTHO05D010599 3.8e-08 62.0 114 39.5
RcHm_v2.0_Chr1g0313281 Rosa chinensis HOM05D008423 ORTHO05D010599 3.8e-08 62.0 52 69.2
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 8.5e-08 60.8 116 35.3
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 1.5e-07 60.1 56 62.5
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 1.5e-07 60.1 58 55.2
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 2.5e-07 59.3 85 42.4
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 2.5e-07 59.3 130 35.4
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 3.2e-07 58.9 56 60.7
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 4.2e-07 58.5 75 44.0
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 4.2e-07 58.5 75 44.0
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 9.4e-07 57.4 125 38.4
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 1.2e-06 57.0 138 37.7
VMungo1080G1057 Vigna mungo HOM05D008423 ORTHO05D010599 2.7e-06 55.8 87 42.5
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 3.6e-06 55.5 55 56.4
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 6.1e-06 54.7 129 32.6


User provided reference genes

Program Settings