Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 2.9e-274 948.0 484 100.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 2.0e-251 872.1 479 94.4
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.8e-143 513.5 424 64.9
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 6.9e-143 511.5 410 66.6
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 4.5e-142 508.8 419 63.2
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 2.9e-141 506.1 397 67.0
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 2.5e-137 493.0 423 63.4
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 1.3e-136 490.7 399 65.7
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.2e-136 490.0 392 66.1
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 4.8e-136 488.8 393 65.9
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.4e-135 486.5 417 61.6
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 5.3e-135 485.3 424 60.6
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 1.2e-134 484.2 428 62.1
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 2.6e-134 483.0 415 62.7
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 4.5e-134 482.3 446 58.7
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 4.5e-134 482.3 417 61.4
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 4.5e-134 482.3 394 63.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 1.0e-133 481.1 382 64.1
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 1.0e-133 481.1 426 62.2
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 2.9e-133 479.6 402 63.4
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.1e-132 477.6 399 63.4
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.4e-132 477.2 395 63.3
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 1.9e-132 476.9 417 60.7
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 2.5e-132 476.5 406 62.8
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 3.2e-132 476.1 412 60.7
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 1.6e-131 473.8 426 60.8
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 7.9e-131 471.5 393 63.4
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 7.9e-131 471.5 382 64.4
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 1.0e-130 471.1 433 58.4
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 3.0e-130 469.5 426 61.0
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 3.9e-130 469.2 426 59.6
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 2.0e-129 466.8 406 62.1
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 2.6e-129 466.5 432 58.8
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 3.3e-129 466.1 432 59.5
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 5.7e-129 465.3 425 60.5
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 2.8e-128 463.0 428 59.3
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 3.7e-128 462.6 381 64.3
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 6.3e-128 461.8 399 61.2
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.1e-127 459.1 403 60.3
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 1.2e-126 457.6 403 60.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.5e-126 457.2 385 61.3
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 2.0e-126 456.8 385 61.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 4.5e-126 455.7 395 60.0
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 7.7e-126 454.9 407 59.2
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.7e-125 453.8 434 57.6
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.9e-124 450.3 418 56.7
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.2e-124 448.4 403 59.3
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.5e-121 440.7 382 60.5
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 2.0e-121 440.3 424 57.3
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 4.4e-121 439.1 419 57.0
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 9.7e-121 438.0 413 58.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.8e-120 436.4 413 56.7
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.8e-120 436.4 403 58.1
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 2.8e-120 436.4 382 59.9
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 8.2e-120 434.9 386 59.3
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 2.4e-119 433.3 391 59.3
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 4.1e-119 432.6 395 58.0
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 9.1e-119 431.4 402 57.0
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.2e-118 431.0 433 54.5
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 3.5e-118 429.5 408 57.8
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 8.5e-117 424.9 400 57.2
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 4.0e-114 416.0 339 61.7
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 6.7e-114 415.2 339 61.9
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.0e-113 413.7 396 57.1
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 5.7e-113 412.1 399 57.4
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.7e-112 410.6 379 57.5
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 6.3e-112 408.7 394 54.6
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.8e-111 407.1 323 63.2
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.2e-110 404.4 415 55.9
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 1.3e-109 401.0 434 51.8
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 5.0e-109 399.1 359 57.9
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 2.5e-108 396.7 373 55.5
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 3.2e-108 396.4 428 52.3
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 3.7e-104 382.9 393 53.9
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 4.0e-98 362.8 412 50.0
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 8.9e-98 361.7 392 51.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.9e-92 344.0 316 56.6
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 1.5e-89 334.3 288 60.4
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 3.4e-89 333.2 260 65.4
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 1.5e-84 317.8 281 61.9
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 1.2e-73 281.6 265 58.1
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 4.1e-71 273.1 265 57.0
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 2.3e-69 267.3 413 41.4
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 4.6e-62 243.0 400 39.0
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 5.3e-58 229.6 204 61.3
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 7.6e-57 225.7 467 34.7
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 4.2e-47 193.4 223 48.9
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 5.6e-44 183.0 180 58.3
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 2.7e-38 164.1 163 55.2
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.0e-33 147.9 159 52.2
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.6e-30 138.3 125 56.0
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 7.4e-12 76.3 258 27.9
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 2.4e-10 71.2 82 42.7
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.9e-08 64.3 457 22.5
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 6.5e-08 63.2 81 45.7
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 6.5e-08 63.2 399 22.1
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 6.5e-08 63.2 399 22.1
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 6.5e-08 63.2 353 24.4
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 8.5e-08 62.8 413 24.5
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.1e-07 62.4 52 61.5
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.1e-07 62.4 411 23.1
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.1e-07 62.4 353 23.8
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.5e-07 62.0 351 23.4
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.9e-07 61.6 352 23.6
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.5e-07 61.2 410 23.4
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.5e-07 61.2 296 24.0
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 9.4e-07 59.3 411 22.1
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 9.4e-07 59.3 403 22.6
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.2e-06 58.9 400 22.8
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.6e-06 58.5 419 22.4
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.6e-06 58.5 352 23.6
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 2.1e-06 58.2 401 22.2
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 2.7e-06 57.8 402 21.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 2.7e-06 57.8 403 21.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 3.6e-06 57.4 173 28.9
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 3.6e-06 57.4 49 51.0
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 3.6e-06 57.4 411 22.4
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 4.7e-06 57.0 345 25.2
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.0e-06 56.2 359 23.7
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 8.0e-06 56.2 413 22.0


User provided reference genes

Program Settings