Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 2.9e-94 348.6 178 100.0
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 1.5e-90 336.3 178 94.9
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 4.3e-90 334.7 178 94.9
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 1.5e-50 203.4 190 55.3
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 1.9e-50 203.0 190 55.3
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 9.3e-45 184.1 193 52.3
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 4.6e-44 181.8 194 53.1
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 3.7e-41 172.2 182 51.6
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 4.8e-41 171.8 166 54.2
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 8.2e-41 171.0 164 53.7
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 3.1e-40 169.1 163 52.1
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 1.2e-39 167.2 169 51.5
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 1.5e-39 166.8 181 50.3
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 1.5e-39 166.8 197 48.7
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 2.0e-39 166.4 167 49.7
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 2.6e-39 166.0 173 49.7
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 2.6e-39 166.0 163 54.6
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 3.4e-39 165.6 166 53.0
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 5.8e-39 164.9 167 50.3
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 7.6e-39 164.5 161 52.8
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 1.0e-38 164.1 166 51.2
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 1.3e-38 163.7 169 51.5
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 2.2e-38 162.9 183 47.0
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 2.9e-38 162.5 168 51.2
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 4.9e-38 161.8 164 51.8
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 4.9e-38 161.8 161 52.2
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 6.5e-38 161.4 173 48.6
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 6.5e-38 161.4 162 51.2
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 8.4e-38 161.0 162 51.9
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 1.1e-37 160.6 162 51.9
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 1.1e-37 160.6 162 51.9
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 1.9e-37 159.8 162 50.6
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.9e-37 159.8 161 54.0
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 1.9e-37 159.8 161 50.3
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 3.2e-37 159.1 178 51.1
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 4.2e-37 158.7 161 51.6
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 5.5e-37 158.3 161 53.4
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 5.5e-37 158.3 178 47.2
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 7.1e-37 157.9 165 48.5
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 1.2e-36 157.1 170 49.4
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.6e-36 156.8 161 52.8
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 2.1e-36 156.4 163 49.7
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 2.1e-36 156.4 160 51.2
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 2.7e-36 156.0 164 50.6
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 3.5e-36 155.6 164 49.4
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 3.5e-36 155.6 166 51.8
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 7.9e-36 154.5 163 49.7
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 7.9e-36 154.5 192 45.8
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 1.0e-35 154.1 182 47.3
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 1.0e-35 154.1 182 47.3
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 1.0e-35 154.1 134 56.7
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 1.0e-35 154.1 181 47.5
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 1.3e-35 153.7 177 48.6
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 3.9e-35 152.1 166 46.4
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 5.1e-35 151.8 188 46.8
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 6.7e-35 151.4 165 47.9
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 6.7e-35 151.4 159 51.6
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 6.7e-35 151.4 174 46.6
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 6.7e-35 151.4 161 50.3
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 8.7e-35 151.0 163 50.9
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 8.7e-35 151.0 164 51.8
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 1.1e-34 150.6 163 46.6
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 1.1e-34 150.6 190 44.2
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 2.5e-34 149.4 174 49.4
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 3.3e-34 149.1 185 44.3
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 4.3e-34 148.7 173 45.7
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 5.7e-34 148.3 161 47.8
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 5.7e-34 148.3 165 49.7
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 7.4e-34 147.9 163 49.7
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 7.4e-34 147.9 146 52.1
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 1.6e-33 146.7 161 47.8
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 2.2e-33 146.4 162 49.4
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 3.7e-33 145.6 185 44.9
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 3.7e-33 145.6 164 47.0
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 6.3e-33 144.8 165 49.1
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 8.2e-33 144.4 177 46.9
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 1.1e-32 144.1 165 49.7
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 1.1e-32 144.1 190 43.7
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 1.8e-32 143.3 164 48.8
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 1.8e-32 143.3 125 56.0
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 2.4e-32 142.9 131 52.7
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 3.1e-32 142.5 165 48.5
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 3.1e-32 142.5 165 48.5
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 4.1e-32 142.1 165 47.9
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 4.1e-32 142.1 165 47.9
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 5.3e-32 141.7 177 44.6
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 5.3e-32 141.7 172 43.0
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 6.9e-32 141.4 165 47.9
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 9.0e-32 141.0 172 43.0
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 1.5e-31 140.2 165 47.3
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 2.0e-31 139.8 167 44.9
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 3.4e-31 139.0 165 47.3
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 4.5e-31 138.7 177 44.6
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 5.9e-31 138.3 141 51.1
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 1.0e-30 137.5 180 42.8
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.3e-30 137.1 150 50.7
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 1.7e-30 136.7 177 44.1
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 2.9e-30 136.0 148 48.0
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 6.5e-30 134.8 172 46.5
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 1.1e-29 134.0 184 41.8
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 4.2e-29 132.1 180 43.9
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 7.2e-29 131.3 150 44.0
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 2.1e-28 129.8 154 43.5
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 1.5e-26 123.6 158 41.8
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 1.9e-26 123.2 112 53.6
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 4.8e-25 118.6 263 33.1
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 9.1e-24 114.4 243 33.3
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 3.0e-19 99.4 166 38.6
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 8.8e-19 97.8 74 59.5
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.2e-17 93.2 68 63.2
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 1.1e-13 80.9 137 35.0
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 1.4e-13 80.5 118 41.5
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 5.2e-11 72.0 53 62.3
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.5e-10 70.5 53 60.4
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.6e-10 69.7 53 60.4
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 2.8e-09 66.2 51 58.8
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 2.4e-08 63.2 59 54.2
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 3.1e-08 62.8 59 54.2
RcHm_v2.0_Chr3g0452521 Rosa chinensis HOM05D006992 ORTHO05D008752 2.2e-06 56.6 79 39.2


User provided reference genes

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